FFCP PHASE1:Hg19::chr6:107077316..107077345,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18647 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WWV3 | |||
|association_with_transcript=16bp_to_ENST00000369063_5end | |||
|cluster_id=chr6:107077316..107077345,- | |||
|description=CAGE_peak_2_at_RTN4IP1_5end | |||
|id=chr6:107077316..107077345,- | |||
|ontology_enrichment_celltype=CL:0000945!2.42e-08!24;CL:0000826!2.42e-08!24;CL:0000236!3.99e-07!14;CL:0000542!4.32e-07!53;CL:0000051!4.32e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.35e-10;24!CL:0000236;2.67e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.27e-11,24;CL:0000826,8.27e-11,24;CL:0000236,7.36e-09,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.37e-18!235;DOID:14566!3.24e-17!239;DOID:2531!1.94e-13!51;DOID:0060083!1.94e-13!51;DOID:1240!4.71e-12!39;DOID:0050686!1.04e-10!137;DOID:8692!7.46e-10!31;DOID:0050687!1.65e-09!143;DOID:305!3.46e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.02e-11;31!DOID:1240;1.62e-11;39!DOID:2531;1.41e-09;51!DOID:0060083;1.41e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.62e-16,235;DOID:2531,2.94e-15,51;DOID:0060083,2.94e-15,51;DOID:14566,5.24e-15,239;DOID:1240,8.90e-14,39;DOID:8692,5.87e-12,31;DOID:0050686,4.48e-10,137;DOID:305,7.54e-08,106;DOID:0050687,4.34e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.77e-09!94;UBERON:0001016!5.77e-09!94;UBERON:0001017!1.88e-08!82;UBERON:0005743!3.30e-08!86;UBERON:0002780!2.96e-07!41;UBERON:0001890!2.96e-07!41;UBERON:0006240!2.96e-07!41;UBERON:0002020!6.54e-07!34;UBERON:0003528!6.54e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.17e-08,89;UBERON:0001017,3.51e-08,81;UBERON:0003528,6.01e-07,34;UBERON:0002020,6.01e-07,34;UBERON:0002780,9.01e-07,41;UBERON:0001890,9.01e-07,41;UBERON:0003080,9.01e-07,41;UBERON:0006240,9.01e-07,41;UBERON:0011216,9.06e-07,223 | |||
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| |||
|short_description=p2@RTN4IP1 | |||
}} |
Latest revision as of 15:49, 19 September 2015
Short description: | p2@RTN4IP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RTN4IP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000369063_5end |
EntrezGene: | RTN4IP1 |
HGNC: | 18647 |
UniProt: | Q8WWV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.27e-11 | 24 |
pro-B cell | 8.27e-11 | 24 |
B cell | 7.36e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.17e-08 | 89 |
central nervous system | 3.51e-08 | 81 |
brain grey matter | 6.01e-07 | 34 |
gray matter | 6.01e-07 | 34 |
regional part of forebrain | 9.01e-07 | 41 |
forebrain | 9.01e-07 | 41 |
anterior neural tube | 9.01e-07 | 41 |
future forebrain | 9.01e-07 | 41 |
organ system subdivision | 9.06e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.62e-16 | 235 |
hematologic cancer | 2.94e-15 | 51 |
immune system cancer | 2.94e-15 | 51 |
disease of cellular proliferation | 5.24e-15 | 239 |
leukemia | 8.90e-14 | 39 |
myeloid leukemia | 5.87e-12 | 31 |
organ system cancer | 4.48e-10 | 137 |
carcinoma | 7.54e-08 | 106 |
cell type cancer | 4.34e-07 | 143 |