FFCP PHASE1:Hg19::chr6:13328716..13328792,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51256 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21066 | |||
|TSSclassifier=strong | |||
|UniProt=Q96MB8,Q2TU37,Q9P0N9,Q5SZL8,Q5SZL4,Q5SZL5,Q5SZL6,Q53F44,Q5JPB9 | |||
|association_with_transcript=0bp_to_ENST00000334971,ENST00000343141,ENST00000356436,ENST00000379291,ENST00000379300,ENST00000379307,ENST00000421203,ENST00000422136,ENST00000446018,ENST00000450347,ENST00000452989,NM_001143964,NM_001143965,NM_001143966,NM_016495,uc003naj.2,uc003nal.2,uc003nam.2,uc003nan.2,uc003nao.2,uc003nap.2,uc003naq.2,uc010jpd.2,uc011dis.1_5end | |||
|cluster_id=chr6:13328716..13328792,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_TBC1D7_5end | |||
|id=chr6:13328716..13328792,- | |||
|ontology_enrichment_celltype=CL:0002057!1.47e-20!42;CL:0000860!2.89e-18!45;CL:0000766!5.75e-13!76;CL:0000763!1.31e-11!112;CL:0000049!1.31e-11!112;CL:0002194!6.95e-11!63;CL:0000576!6.95e-11!63;CL:0000040!6.95e-11!63;CL:0000559!6.95e-11!63;CL:0000037!1.12e-10!172;CL:0000566!1.12e-10!172;CL:0002009!3.15e-10!65;CL:0000738!4.60e-10!140;CL:0000839!5.49e-10!70;CL:0000988!1.94e-09!182;CL:0000557!5.68e-09!71;CL:0002032!5.69e-09!165;CL:0000837!5.69e-09!165;CL:0002087!7.61e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.00e-18;33!CL:0002057;3.00e-18;33!CL:0000473;3.32e-13;39!CL:0000234;3.32e-13;39!CL:0000576;1.81e-09;48!CL:0000766;6.83e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.47e-20,42;CL:0002057,1.47e-20,42;CL:0000473,2.49e-18,48;CL:0000234,2.49e-18,48;CL:0000766,3.89e-14,72;CL:0000763,2.14e-12,108;CL:0000049,2.14e-12,108;CL:0002194,4.63e-12,59;CL:0000576,4.63e-12,59;CL:0000040,4.63e-12,59;CL:0000559,4.63e-12,59;CL:0002009,2.57e-11,61;CL:0000037,3.24e-11,168;CL:0000839,5.44e-11,66;CL:0000738,1.16e-10,136;CL:0000557,7.03e-10,67;CL:0000988,8.83e-10,177;CL:0002032,1.85e-09,161;CL:0000837,1.85e-09,161;CL:0002087,2.13e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;7.61e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.30e-08!80;UBERON:0001474!1.88e-07!86;UBERON:0002405!1.92e-07!115;UBERON:0002390!2.47e-07!102;UBERON:0003061!2.47e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.48e-09,76;UBERON:0001474,4.02e-08,82;UBERON:0002390,6.45e-08,98;UBERON:0003061,6.45e-08,98;UBERON:0002405,1.20e-07,93;UBERON:0002193,5.72e-07,108 | |||
|phase1_expression=12.1724514111273,9.63452357509424,12.5449419645414,18.0131937035635,9.83314407740033,13.0850778615055,30.3959853801973,7.58063848112197,14.626395179191,8.3549538410513,23.0274385430901,11.1405099786388,8.44054330331051,5.321953177282,8.94772914465373,8.0679017574213,12.0538905604795,5.11217063271161,17.0776479576677,22.654274686129,18.564062903227,15.3592813524263,17.7466312021255,21.7630335865886,17.7015121828672,14.136480063371,15.10650845879,15.7421562627358,41.6966133459838,28.0195460610965,57.5915978735803,21.1466881630153,22.891649827147,36.9754010166788,12.1623504911074,6.39761546193397,14.6800219667424,100.27316894427,94.4564347584367,86.370326544909,7.83704159839735,15.87078963493,5.40908692031792,43.4740733950898,58.9486472154543,48.2742281763754,101.80391816469,169.401169864992,220.820642448209,140.106195060887,170.346869841852,188.003372761425,224.084692478802,233.665455457345,353.463130011232,97.3212895435266,147.915133331352,145.84554140486,206.300543457988,228.180538251103,283.865683854774,33.3149813188583,61.6342702050842,40.9175760511386,142.202526928006,204.25868088881,262.830989076133,152.507939810843,140.278905055034,165.497899665299,81.7289328555048,194.818869437422,209.814562873306,28.941974224736,15.3075095974831,21.3851818418543,27.0712001063053,10.2120287132224,14.6260283894343,20.2359048056286,6.76316702476906,11.3251775334073,10.5597746676794,7.09980194640771,9.7846017924991,16.6424786800938,6.00593980554019,13.2193061189531,7.27149360063348,10.494591299889,14.7995371968457,10.5702694086769,14.1441094406335,17.1822727152734,33.6305137788922,20.543958612456,11.0157471263747,17.2924735609632,16.2425184209612,15.8827170621144,14.340579731878,12.3096429491031,7.79306913631645,11.2524561454025,12.0788422064683,6.20294904834139,10.5613506868356,9.86303161887699,14.5666469267064,8.22189523018381,17.9627511560801,11.302320343667,13.7906503740716,5.88589821797369,10.4535523804977,10.3111501854785,13.7959377696692,6.18529401868734,7.08455137654608,7.32700452945422,10.4173352617027,12.3558765778289,7.52875595388864,5.88738411310325,14.9916871862815,6.39298580518846,8.21127996921047,14.5156855121807,13.3720097891754,12.5997231378035,4.87613732627923,18.7796240717018,12.1469433751354,7.95166135246046,10.0267582127178,7.9665585428453,9.54343136461319,10.705967146658,19.0014982499776,22.6163985411815,20.9925137806571,10.4128365020682,9.4716774956061,15.572946596946,6.16640047943898,6.96518949197069,9.57297315735829,15.9788718284579,26.883760806666,21.5445350771148,11.9257444420023,13.763753521698,5.9013885273291,14.6980064900242,8.80948816040802,8.52865930014209,16.7195973229448,13.1792547176358,12.8075854567216,11.7152214467635,12.8905381474927,15.9657142200888,13.6674752226975,11.0298924103761,21.8738325928075,12.9484606011916,16.1661148290842,14.0764350604153,22.9974956198825,11.3911879148175,13.923332538711,237.204751384914,321.85761924311,7.84969293856562,13.4182426957736,12.2831596314642,13.7705548045748,9.46560848471085,12.0587249947441,13.4562624034154,8.5399196583764,16.2800581955326,10.2699641681923,31.3875865922373,18.7981188580478,13.4708110603989,8.06646294271999,10.0758215688533,9.98912245857026,9.12754914471119,6.72519062483105,9.74706338743249,12.9498355494505,12.5001217965001,10.0035543914898,15.2314553466592,10.7458812422796,9.50402285825643,13.3524141810421,5.46096817162816,12.9351265526923,10.9418474070143,8.13270379167767,8.58898758000967,10.0964852802593,8.88814607817157,19.5309476578576,17.0148274740032,5.38168907066586,5.76604949810132,5.72216133130817,8.10245959427886,4.53431128649131,11.3361837620077,6.70020682793723,10.126579934476,10.2308855419259,10.8546522924969,6.90374239817245,6.30419621593366,10.2952781829818,10.2767140192193,8.81715080014536,17.58673763786,11.4553370648151,13.1930113878942,16.2225029152362,16.9638103451501,14.2918549729508,17.4150572425822,14.1299676490352,16.4239811584123,7.8224766164908,9.64861407289328,23.4829366299217,3.71494342425583,8.66255378003503,13.0137480043828,14.6668680367948,14.7016728228924,14.558804400676,15.033681642376,15.6598608613324,15.1011065139384,13.1468381633982,11.5424147083917,15.5012645471176,21.0362660705169,16.462960453256,14.7008711385542,12.6755034821831,2.94848165003288,5.90789906681404,34.8755848537574,11.5609132230527,9.77936518701596,10.3165268284108,10.1161577931858,4.62433273093502,7.59225250299943,11.7290989911717,10.3993478527958,5.77325368101093,12.056762117408,12.7975476717046,14.0035454328242,14.3525508898749,12.3665198952489,20.5453143469412,18.8866955660872,9.60246323740849,17.5503198854428,6.98566462757023,18.7467667973554,11.2548025893236,3.40260233381728,3.94057499892532,3.77824120068151,7.66765358330422,4.92663237895944,8.54069809928293,19.6961709763733,9.07955706526857,11.7405463086533,80.8963173282234,119.180388774183,176.998345287171,121.461436676121,105.912317484423,64.8741004942862,76.0298310797338,9.75540433804638,9.59112151433216,10.4873748723959,24.0445391309467,3.576564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| |||
|short_description=p1@TBC1D7 | |||
}} |
Latest revision as of 20:33, 24 September 2015
Short description: | p1@TBC1D7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBC1D7_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000334971, ENST00000343141, ENST00000356436, ENST00000379291, ENST00000379300, ENST00000379307, ENST00000421203, ENST00000422136, ENST00000446018, ENST00000450347, ENST00000452989, NM_001143964, NM_001143965, NM_001143966, NM_016495, uc003naj.2, uc003nal.2, uc003nam.2, uc003nan.2, uc003nao.2, uc003nap.2, uc003naq.2, uc010jpd.2, uc011dis.1_5end |
EntrezGene: | TBC1D7 |
HGNC: | 21066 |
UniProt: | Q96MB8Q2TU37Q9P0N9Q5SZL8Q5SZL4Q5SZL5Q5SZL6Q53F44Q5JPB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.47e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.47e-20 | 42 |
defensive cell | 2.49e-18 | 48 |
phagocyte | 2.49e-18 | 48 |
myeloid leukocyte | 3.89e-14 | 72 |
myeloid cell | 2.14e-12 | 108 |
common myeloid progenitor | 2.14e-12 | 108 |
monopoietic cell | 4.63e-12 | 59 |
monocyte | 4.63e-12 | 59 |
monoblast | 4.63e-12 | 59 |
promonocyte | 4.63e-12 | 59 |
macrophage dendritic cell progenitor | 2.57e-11 | 61 |
hematopoietic stem cell | 3.24e-11 | 168 |
myeloid lineage restricted progenitor cell | 5.44e-11 | 66 |
leukocyte | 1.16e-10 | 136 |
granulocyte monocyte progenitor cell | 7.03e-10 | 67 |
hematopoietic cell | 8.83e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.85e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-09 | 161 |
nongranular leukocyte | 2.13e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.48e-09 | 76 |
bone element | 4.02e-08 | 82 |
hematopoietic system | 6.45e-08 | 98 |
blood island | 6.45e-08 | 98 |
immune system | 1.20e-07 | 93 |
hemolymphoid system | 5.72e-07 | 108 |