FFCP PHASE1:Hg19::chr6:169588532..169588548,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:169588532..169588548,- | |||
|coexpression_cluster_id=C559 | |||
|description=CAGE_peak_at_chr6:169588532..169588548,- | |||
|id=chr6:169588532..169588548,- | |||
|ontology_enrichment_celltype=CL:0000188!1.03e-61!9;CL:0000594!1.03e-26!3;CL:0002575!2.04e-18!2;CL:0000680!8.23e-17!57;CL:0000056!8.23e-17!57;CL:0000355!8.23e-17!57;CL:0000183!3.24e-16!59;CL:0000187!6.58e-12!54;CL:0000393!1.38e-10!60;CL:0000211!1.38e-10!60;CL:0002557!1.17e-09!1;CL:0000515!1.39e-09!4;CL:0000669!6.54e-08!5;CL:0000222!3.96e-07!119;CL:0000055!5.98e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.29e-68;9!CL:0002575;1.07e-13;2!CL:0000594;1.74e-09;3!CL:0000187;3.98e-09;55!CL:0000393;3.19e-08;61!CL:0000211;3.19e-08;61!CL:0000669;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.30e-68,9;CL:0002575,1.21e-13,2;CL:0000187,1.63e-11,55;CL:0000680,6.25e-11,58;CL:0000056,6.25e-11,58;CL:0000355,6.25e-11,58;CL:0000393,2.10e-10,61;CL:0000211,2.10e-10,61;CL:0000594,1.67e-09,3;CL:0000669,1.80e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000355;3.00e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.36e-15!61;UBERON:0002036!1.36e-15!61;UBERON:0003082!1.36e-15!61;UBERON:0002385!4.83e-15!63;UBERON:0001015!4.83e-15!63;UBERON:0000383!4.83e-15!63;UBERON:0004290!2.32e-13!70;UBERON:0000486!3.80e-11!82;UBERON:0000914!5.44e-11!83;UBERON:0002329!5.44e-11!83;UBERON:0003077!5.44e-11!83;UBERON:0003059!5.44e-11!83;UBERON:0007282!5.44e-11!83;UBERON:0009618!5.44e-11!83;UBERON:0007285!5.44e-11!83;UBERON:0001282!1.07e-09!1;UBERON:0009842!1.07e-09!1;UBERON:0003704!1.07e-09!1;UBERON:0001171!1.07e-09!1;UBERON:0001172!1.07e-09!1;UBERON:0000490!1.96e-08!138;UBERON:0005256!8.73e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.04e-38;16!UBERON:0002036;1.04e-38;16!UBERON:0002385;2.07e-19;31!UBERON:0001015;2.07e-19;31!UBERON:0000383;2.07e-19;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.06e-10,62;UBERON:0002036,3.06e-10,62;UBERON:0003082,3.06e-10,62;UBERON:0002385,6.30e-10,64;UBERON:0001015,6.30e-10,64;UBERON:0000383,6.30e-10,64;UBERON:0002329,5.74e-09,71;UBERON:0003059,5.74e-09,71;UBERON:0007282,5.74e-09,71;UBERON:0004290,5.74e-09,71;UBERON:0009618,5.74e-09,71;UBERON:0003077,7.60e-09,72;UBERON:0007285,7.60e-09,72;UBERON:0007524,9.99e-09,73;UBERON:0007503,3.53e-08,78;UBERON:0000486,1.07e-07,83 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,2.74514739048685,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6939491804025,0.770243085573222,1.38153307253517,2.75673144969061,0.214840489736547,0.435050081742686,1.53407929348982,8.27997931514657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20022211730523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78173235684127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:169588532..169588548,- | |||
}} |
Latest revision as of 22:15, 30 July 2015
Short description: | p@chr6:169588532..169588548, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:169588532..169588548, - |
Coexpression cluster: | C559_Skeletal_Pericytes_mesenchymal_Myoblast_rhabdomyosarcoma_skeletal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.30e-68 | 9 |
central nervous system pericyte | 1.21e-13 | 2 |
muscle cell | 1.63e-11 | 55 |
muscle precursor cell | 6.25e-11 | 58 |
myoblast | 6.25e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.25e-11 | 58 |
electrically responsive cell | 2.10e-10 | 61 |
electrically active cell | 2.10e-10 | 61 |
skeletal muscle satellite cell | 1.67e-09 | 3 |
pericyte cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.06e-10 | 62 |
striated muscle tissue | 3.06e-10 | 62 |
myotome | 3.06e-10 | 62 |
muscle tissue | 6.30e-10 | 64 |
musculature | 6.30e-10 | 64 |
musculature of body | 6.30e-10 | 64 |
somite | 5.74e-09 | 71 |
presomitic mesoderm | 5.74e-09 | 71 |
presumptive segmental plate | 5.74e-09 | 71 |
dermomyotome | 5.74e-09 | 71 |
trunk paraxial mesoderm | 5.74e-09 | 71 |
paraxial mesoderm | 7.60e-09 | 72 |
presumptive paraxial mesoderm | 7.60e-09 | 72 |
dense mesenchyme tissue | 9.99e-09 | 73 |
epithelial vesicle | 3.53e-08 | 78 |
multilaminar epithelium | 1.07e-07 | 83 |