FFCP PHASE1:Hg19::chr6:30524765..30524799,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21149 | |||
|TSSclassifier=strong | |||
|UniProt=A6NDA2,P79522 | |||
|association_with_transcript=9bp_to_ENST00000376555,uc003nqi.1,uc003nqj.1_5end | |||
|cluster_id=chr6:30524765..30524799,+ | |||
|description=CAGE_peak_4_at_PRR3_5end | |||
|id=chr6:30524765..30524799,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.16e-16!52;CL:0002032!3.73e-16!165;CL:0000837!3.73e-16!165;CL:0000542!6.22e-16!53;CL:0000051!6.22e-16!53;CL:0000037!6.25e-16!172;CL:0000566!6.25e-16!172;CL:0000988!5.52e-15!182;CL:0000738!2.92e-14!140;CL:0002031!3.07e-14!124;CL:0002087!2.19e-12!119;CL:0000791!4.45e-09!18;CL:0000789!4.45e-09!18;CL:0002420!4.45e-09!18;CL:0002419!4.45e-09!18;CL:0000790!4.45e-09!18;CL:0000945!5.16e-09!24;CL:0000826!5.16e-09!24;CL:0000084!1.39e-07!25;CL:0000827!1.39e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.91e-10;53!CL:0000791;1.73e-09;18!CL:0000789;1.73e-09;18!CL:0002419;1.73e-09;18!CL:0000945;1.50e-08;24!CL:0000084;9.10e-08;25!CL:0000236;5.89e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.16e-17,52;CL:0000542,7.69e-17,53;CL:0000051,7.69e-17,53;CL:0002032,4.74e-16,161;CL:0000837,4.74e-16,161;CL:0000037,6.53e-16,168;CL:0000988,2.09e-15,177;CL:0000738,1.94e-14,136;CL:0002031,3.89e-14,120;CL:0002087,3.58e-12,115;CL:0000791,1.15e-09,18;CL:0000789,1.15e-09,18;CL:0002420,1.15e-09,18;CL:0002419,1.15e-09,18;CL:0000790,1.15e-09,18;CL:0000945,1.35e-09,24;CL:0000826,1.35e-09,24;CL:0000084,3.70e-08,25;CL:0000827,3.70e-08,25;CL:0000236,6.17e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;6.91e-10;53!CL:0000790;1.73e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.87e-07;15!UBERON:0000179;2.87e-07;15!UBERON:0000463;2.87e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.77e-07,15;UBERON:0000179,3.77e-07,15;UBERON:0000463,3.77e-07,15 | |||
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| |||
|short_description=p4@PRR3 | |||
}} |
Latest revision as of 16:51, 17 September 2015
Short description: | p4@PRR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRR3_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000376555, uc003nqi.1, uc003nqj.1_5end |
EntrezGene: | PRR3 |
HGNC: | 21149 |
UniProt: | A6NDA2P79522 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.16e-17 | 52 |
lymphocyte | 7.69e-17 | 53 |
common lymphoid progenitor | 7.69e-17 | 53 |
hematopoietic oligopotent progenitor cell | 4.74e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.74e-16 | 161 |
hematopoietic stem cell | 6.53e-16 | 168 |
hematopoietic cell | 2.09e-15 | 177 |
leukocyte | 1.94e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 3.89e-14 | 120 |
nongranular leukocyte | 3.58e-12 | 115 |
mature alpha-beta T cell | 1.15e-09 | 18 |
alpha-beta T cell | 1.15e-09 | 18 |
immature T cell | 1.15e-09 | 18 |
mature T cell | 1.15e-09 | 18 |
immature alpha-beta T cell | 1.15e-09 | 18 |
lymphocyte of B lineage | 1.35e-09 | 24 |
pro-B cell | 1.35e-09 | 24 |
T cell | 3.70e-08 | 25 |
pro-T cell | 3.70e-08 | 25 |
B cell | 6.17e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 3.77e-07 | 15 |
haemolymphatic fluid | 3.77e-07 | 15 |
organism substance | 3.77e-07 | 15 |