FFCP PHASE1:Mm9::chr1:36364572..36364580,+: Difference between revisions
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{{FFCP|EntrezGene=214855|HGNC=|UniProt=D3Z085,Q3U108,D3Z0W0|association_with_transcript=0bp_to_ENSMUST00000126413,NM_001172205,NM_001172206,NM_145996,NR_033310,uc007apu.2,uc007apv.2,uc007apw.2,uc007apx.2,uc007apy.2,uc011wjg.1,uc011wjh.1_5end|description=CAGE_peak_2_at_Arid5a_5end|id=chr1:36364572..36364580,+|ontology_enrichment_celltype=CL:0000988!6.51e-11!32;CL:0002032!6.51e-11!32;CL:0000037!6.51e-11!32;CL:0000566!6.51e-11!32;CL:0000837!6.51e-11!32;CL:0002031!2.13e-10!25;CL:0000838!6.29e-09!12;CL:0000738!9.15e-09!17;CL:0002087!9.15e-09!17;CL:0000084!3.71e-08!11;CL:0000827!3.71e-08!11;CL:0000542!1.00e-07!13;CL:0000051!1.00e-07!13;CL:0000219!1.27e-07!54;CL:0000791!2.59e-07!9;CL:0000789!2.59e-07!9;CL:0002420!2.59e-07!9;CL:0002419!2.59e-07!9;CL:0000790!2.59e-07!9;CL:0002320!2.74e-07!46;CL:0000134!2.74e-07!46|ontology_enrichment_celltype_v019_2=CL:0000738,4.64e-27,17;CL:0002087,4.64e-27,17;CL:0000791,3.49e-21,9;CL:0000789,3.49e-21,9;CL:0002420,3.49e-21,9;CL:0002419,3.49e-21,9;CL:0000790,3.49e-21,9;CL:0002031,4.12e-21,25;CL:0000838,1.22e-20,12;CL:0000542,5.73e-19,13;CL:0000051,5.73e-19,13;CL:0000988,8.44e-19,32;CL:0002032,8.44e-19,32;CL:0000037,8.44e-19,32;CL:0000837,8.44e-19,32;CL:0000624,5.96e-18,8;CL:0000084,3.46e-17,11;CL:0000827,3.46e-17,11;CL:0002320,2.29e-12,46;CL:0000134,2.29e-12,46;CL:0000219,5.95e-12,54;CL:0000893,3.70e-11,6;CL:0002489,3.70e-11,6;CL:0000898,3.70e-11,6;CL:0000809,3.70e-11,6;CL:0000810,3.70e-11,6;CL:0000895,3.70e-11,6;CL:0000808,3.70e-11,6;CL:0000894,3.70e-11,6;CL:0000806,3.70e-11,6;CL:0000807,3.70e-11,6;CL:0000805,3.70e-11,6;CL:0002425,3.70e-11,6;CL:0002436,3.70e-11,6;CL:0002427,3.70e-11,6;CL:0002428,3.70e-11,6;CL:0002429,3.70e-11,6;CL:0002433,3.70e-11,6;CL:0002431,3.70e-11,6;CL:0002432,3.70e-11,6;CL:0002194,1.11e-09,4;CL:0000766,1.11e-09,4;CL:0000234,1.11e-09,4;CL:0000576,1.11e-09,4;CL:0000235,1.11e-09,4;CL:0000864,1.11e-09,4;CL:0002009,1.11e-09,4;CL:0000040,1.11e-09,4;CL:0000559,1.11e-09,4;CL:0002476,4.18e-09,2;CL:0000034,1.41e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.74e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.29e-12,46|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0.467225281191051,2.1950964985068,2.25261955442667,2.80877431586392,1.88339765048055,1.35612670292072,0.684802919724823,0.611942816932982,0.333109761815663,0.202475267389826,0.699561878128147,0.630924330716475,1.23402990245165,0.84877930359606,0.17008658030214,0.794327609607082,0.522399578277871,0.47997726838022,0.22940928106717,0,0.430761996159075,0,0,0,0,0.635030673459631,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,0.588231488031014,1.36609096991689,0.971020706062307,0.251793635951155,0.608261587317087,0.183546752161682,0,0.436050312760893,0.659058548203415,0,0,1.43752564364972,2.85230430298152,1.45072428402269,1.34437519656986,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0.899899717281399,0,0,1.79760066311043,0,0,0,0,0,0,0,0,0,1.10115880999389,0.893811366596314,0.768032666281217,0.263772575460388,0.0914876436024097,0,0.279182999001381,0,0.61119299110724,0,0,0,0.302904773332736,0.604572480854284,0.869593466105033,0,0,0,0,0.448026887097336,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0.865964164044856,0.760079596425296,0,0.22836775943812,0.517875767294343,0,0.173485326766136,0,0.230615497256059,0,0,0,0.494389935468748,0.433798070759735,0,0.161766849947409,0,0,1.86391761218122,0,0,0,0.958520996047362,0,1.14363204365758,0.299581278809645,0.457500602818626,0.125654352112864,0.347648640384553,0.767146371990992,0.20778804455956,0.324482526135515,0.101839363850316,0.373220911830279,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.398068533636986,0.702213187313235,0.51469581422943,0.284163499395593,0.414251545071004,0,0,0.710234206755631,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0.205809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0.38992817423824,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0.50925170356284,0,0,0.549122826376163,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0.952174563544055,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0.289298117163023,1.50791283939272,2.17562273527484,1.47529281905711,0.551873492609465,0.160550589987792,0.468846746368813,0.163934945376675,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0.321321316421807,0,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0.775284879504663,0,0.356497378384721,0.632073515871632,0,0,0,0.18006109403131,0,0.428674070063185,0,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0,0.484393280087717,0.180938774784468,0.358117032009409,0.164140899745061,0,0.370850604021019,0.854354403989263,0,0,0,0.410082683163076,0.228778173206523,1.35982743995084,0.979660166265606,2.07299960706636,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0.436725127492355,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0,0.168956125490778,0.352071715937262,0,0.629156066554265,0.241584120826006,0.864090018773596,0.948033361884535,0.405450430580328,0.102710957164827,0,0.179026695667481,0.39736270956253,0,0.147689527174577,0.504832249740738,0.228620419965,0.100826185136841,0.194915761479505,0,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0.563047426353546,0,0.214368379079066,0.501572104035363,0,0,0,0.343706364687375,0.685082519770642,0,0,1.80128481289688,0.453142408984205,1.03552062350364,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0,1.12228454331548,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p2@Arid5a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=214855 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=D3Z085,Q3U108,D3Z0W0 | |||
|association_with_transcript=0bp_to_ENSMUST00000126413,NM_001172205,NM_001172206,NM_145996,NR_033310,uc007apu.2,uc007apv.2,uc007apw.2,uc007apx.2,uc007apy.2,uc011wjg.1,uc011wjh.1_5end | |||
|cluster_id=chr1:36364572..36364580,+ | |||
|description=CAGE_peak_2_at_Arid5a_5end | |||
|id=chr1:36364572..36364580,+ | |||
|ontology_enrichment_celltype=CL:0000988!6.51e-11!32;CL:0002032!6.51e-11!32;CL:0000037!6.51e-11!32;CL:0000566!6.51e-11!32;CL:0000837!6.51e-11!32;CL:0002031!2.13e-10!25;CL:0000838!6.29e-09!12;CL:0000738!9.15e-09!17;CL:0002087!9.15e-09!17;CL:0000084!3.71e-08!11;CL:0000827!3.71e-08!11;CL:0000542!1.00e-07!13;CL:0000051!1.00e-07!13;CL:0000219!1.27e-07!54;CL:0000791!2.59e-07!9;CL:0000789!2.59e-07!9;CL:0002420!2.59e-07!9;CL:0002419!2.59e-07!9;CL:0000790!2.59e-07!9;CL:0002320!2.74e-07!46;CL:0000134!2.74e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.64e-27,17;CL:0002087,4.64e-27,17;CL:0000791,3.49e-21,9;CL:0000789,3.49e-21,9;CL:0002420,3.49e-21,9;CL:0002419,3.49e-21,9;CL:0000790,3.49e-21,9;CL:0002031,4.12e-21,25;CL:0000838,1.22e-20,12;CL:0000542,5.73e-19,13;CL:0000051,5.73e-19,13;CL:0000988,8.44e-19,32;CL:0002032,8.44e-19,32;CL:0000037,8.44e-19,32;CL:0000837,8.44e-19,32;CL:0000624,5.96e-18,8;CL:0000084,3.46e-17,11;CL:0000827,3.46e-17,11;CL:0002320,2.29e-12,46;CL:0000134,2.29e-12,46;CL:0000219,5.95e-12,54;CL:0000893,3.70e-11,6;CL:0002489,3.70e-11,6;CL:0000898,3.70e-11,6;CL:0000809,3.70e-11,6;CL:0000810,3.70e-11,6;CL:0000895,3.70e-11,6;CL:0000808,3.70e-11,6;CL:0000894,3.70e-11,6;CL:0000806,3.70e-11,6;CL:0000807,3.70e-11,6;CL:0000805,3.70e-11,6;CL:0002425,3.70e-11,6;CL:0002436,3.70e-11,6;CL:0002427,3.70e-11,6;CL:0002428,3.70e-11,6;CL:0002429,3.70e-11,6;CL:0002433,3.70e-11,6;CL:0002431,3.70e-11,6;CL:0002432,3.70e-11,6;CL:0002194,1.11e-09,4;CL:0000766,1.11e-09,4;CL:0000234,1.11e-09,4;CL:0000576,1.11e-09,4;CL:0000235,1.11e-09,4;CL:0000864,1.11e-09,4;CL:0002009,1.11e-09,4;CL:0000040,1.11e-09,4;CL:0000559,1.11e-09,4;CL:0002476,4.18e-09,2;CL:0000034,1.41e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.74e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.29e-12,46 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0.467225281191051,2.1950964985068,2.25261955442667,2.80877431586392,1.88339765048055,1.35612670292072,0.684802919724823,0.611942816932982,0.333109761815663,0.202475267389826,0.699561878128147,0.630924330716475,1.23402990245165,0.84877930359606,0.17008658030214,0.794327609607082,0.522399578277871,0.47997726838022,0.22940928106717,0,0.430761996159075,0,0,0,0,0.635030673459631,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,0.588231488031014,1.36609096991689,0.971020706062307,0.251793635951155,0.608261587317087,0.183546752161682,0,0.436050312760893,0.659058548203415,0,0,1.43752564364972,2.85230430298152,1.45072428402269,1.34437519656986,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0.899899717281399,0,0,1.79760066311043,0,0,0,0,0,0,0,0,0,1.10115880999389,0.893811366596314,0.768032666281217,0.263772575460388,0.0914876436024097,0,0.279182999001381,0,0.61119299110724,0,0,0,0.302904773332736,0.604572480854284,0.869593466105033,0,0,0,0,0.448026887097336,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0.865964164044856,0.760079596425296,0,0.22836775943812,0.517875767294343,0,0.173485326766136,0,0.230615497256059,0,0,0,0.494389935468748,0.433798070759735,0,0.161766849947409,0,0,1.86391761218122,0,0,0,0.958520996047362,0,1.14363204365758,0.299581278809645,0.457500602818626,0.125654352112864,0.347648640384553,0.767146371990992,0.20778804455956,0.324482526135515,0.101839363850316,0.373220911830279,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.398068533636986,0.702213187313235,0.51469581422943,0.284163499395593,0.414251545071004,0,0,0.710234206755631,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0.205809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0.38992817423824,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0.50925170356284,0,0,0.549122826376163,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0.952174563544055,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0.289298117163023,1.50791283939272,2.17562273527484,1.47529281905711,0.551873492609465,0.160550589987792,0.468846746368813,0.163934945376675,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0.321321316421807,0,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0.775284879504663,0,0.356497378384721,0.632073515871632,0,0,0,0.18006109403131,0,0.428674070063185,0,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0,0.484393280087717,0.180938774784468,0.358117032009409,0.164140899745061,0,0.370850604021019,0.854354403989263,0,0,0,0.410082683163076,0.228778173206523,1.35982743995084,0.979660166265606,2.07299960706636,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0.436725127492355,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0,0.168956125490778,0.352071715937262,0,0.629156066554265,0.241584120826006,0.864090018773596,0.948033361884535,0.405450430580328,0.102710957164827,0,0.179026695667481,0.39736270956253,0,0.147689527174577,0.504832249740738,0.228620419965,0.100826185136841,0.194915761479505,0,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0.563047426353546,0,0.214368379079066,0.501572104035363,0,0,0,0.343706364687375,0.685082519770642,0,0,1.80128481289688,0.453142408984205,1.03552062350364,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0,1.12228454331548,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p2@Arid5a | |||
}} |
Latest revision as of 02:14, 27 September 2015
Short description: | p2@Arid5a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Arid5a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000126413, NM_001172205, NM_001172206, NM_145996, NR_033310, uc007apu.2, uc007apv.2, uc007apw.2, uc007apx.2, uc007apy.2, uc011wjg.1, uc011wjh.1_5end |
EntrezGene: | Arid5a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.29e-12 | 46 |