FFCP PHASE1:Hg19::chr6:68591611..68591627,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:68591611..68591627,- | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_at_chr6:68591611..68591627,- | |||
|id=chr6:68591611..68591627,- | |||
|ontology_enrichment_celltype=CL:0000763!1.45e-18!112;CL:0000049!1.45e-18!112;CL:0002032!1.74e-12!165;CL:0000837!1.74e-12!165;CL:0000988!3.87e-12!182;CL:0000037!8.59e-12!172;CL:0000566!8.59e-12!172 | |||
|ontology_enrichment_celltype_v019=CL:0000763;4.44e-14;100!CL:0000988;2.81e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.07e-30,108;CL:0000049,1.07e-30,108;CL:0002032,5.76e-20,161;CL:0000837,5.76e-20,161;CL:0000037,4.75e-19,168;CL:0000988,5.62e-18,177;CL:0000134,7.48e-08,354;CL:0002320,1.18e-07,361;CL:0000219,5.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000049;8.44e-11;108 | |||
|ontology_enrichment_disease=DOID:8692!4.15e-65!31;DOID:1240!2.11e-56!39;DOID:2531!1.28e-46!51;DOID:0060083!1.28e-46!51;DOID:1036!2.34e-36!8;DOID:0050686!1.15e-17!137;DOID:14566!5.79e-10!239;DOID:162!2.85e-09!235;DOID:0060085!4.06e-07!1;DOID:3165!4.06e-07!1;DOID:0060121!4.06e-07!1;DOID:2438!4.06e-07!1;DOID:4418!4.06e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.83e-98;31!DOID:1240;1.87e-69;39!DOID:1036;7.97e-68;8!DOID:2531;2.09e-42;51!DOID:0060083;2.09e-42;51!DOID:0060085;3.85e-12;1!DOID:3165;3.85e-12;1!DOID:0060121;3.85e-12;1!DOID:2438;3.85e-12;1!DOID:4418;3.85e-12;1!DOID:0050686;3.06e-08;137 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.29e-100,31;DOID:1240,1.29e-79,39;DOID:2531,7.94e-68,51;DOID:0060083,7.94e-68,51;DOID:1036,7.98e-68,8;DOID:0050686,8.26e-24,137;DOID:162,5.22e-13,235;DOID:14566,1.08e-12,239;DOID:0060085,4.81e-12,1;DOID:3165,4.81e-12,1;DOID:0060121,4.81e-12,1;DOID:2438,4.81e-12,1;DOID:4418,4.81e-12,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.22e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,5.58822240011887,0,0,6.49243880549111,0.280797178113459,2.28234679033192,0,0,0,4.49646610290359,0,0,0,4.60861146462687,1.56573275524691,3.17013369252626,2.54004524022652,1.9488432172667,0,0.270455678475983,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.69203256335621,0,18.9500354918432,15.2928776767837,15.9430507627051,12.333992627072,2.86085842164682,0,0.163232808159148,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19228767021794,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31348033198942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr6:68591611..68591627,- | |||
}} |
Latest revision as of 02:46, 31 July 2015
Short description: | p@chr6:68591611..68591627, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:68591611..68591627, - |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.07e-30 | 108 |
common myeloid progenitor | 1.07e-30 | 108 |
hematopoietic oligopotent progenitor cell | 5.76e-20 | 161 |
hematopoietic multipotent progenitor cell | 5.76e-20 | 161 |
hematopoietic stem cell | 4.75e-19 | 168 |
hematopoietic cell | 5.62e-18 | 177 |
mesenchymal cell | 7.48e-08 | 354 |
connective tissue cell | 1.18e-07 | 361 |
motile cell | 5.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.22e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.29e-100 | 31 |
leukemia | 1.29e-79 | 39 |
hematologic cancer | 7.94e-68 | 51 |
immune system cancer | 7.94e-68 | 51 |
chronic leukemia | 7.98e-68 | 8 |
organ system cancer | 8.26e-24 | 137 |
cancer | 5.22e-13 | 235 |
disease of cellular proliferation | 1.08e-12 | 239 |
organ system benign neoplasm | 4.81e-12 | 1 |
skin benign neoplasm | 4.81e-12 | 1 |
integumentary system benign neoplasm | 4.81e-12 | 1 |
dermis tumor | 4.81e-12 | 1 |
cutaneous fibrous histiocytoma | 4.81e-12 | 1 |