FFCP PHASE1:Hg19::chr6:81662329..81662343,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:81662329..81662343,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr6:81662329..81662343,- | |||
|id=chr6:81662329..81662343,- | |||
|ontology_enrichment_celltype=CL:0002274!4.23e-19!5;CL:0000457!4.23e-19!5;CL:0002191!4.23e-19!5;CL:0000097!4.23e-19!5;CL:0000831!4.23e-19!5;CL:0002028!4.23e-19!5;CL:0000163!1.13e-10!9;CL:0000080!3.22e-09!6;CL:0000151!2.61e-07!35;CL:0000319!5.45e-07!1;CL:0000569!9.48e-07!4;CL:0000011!9.48e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000054;2.05e-15;2!CL:0000137;2.05e-15;2!CL:0000092;2.05e-15;2!CL:1000306;2.26e-08;4!CL:0002547;2.26e-08;4!CL:0000097;4.79e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.78e-15,2;CL:0000137,1.78e-15,2;CL:0000092,1.78e-15,2;CL:1000306,2.61e-08,4;CL:0002547,2.61e-08,4;CL:0000097,4.79e-07,5;CL:0002028,4.79e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060085!1.75e-07!1;DOID:3165!1.75e-07!1;DOID:0060121!1.75e-07!1;DOID:2438!1.75e-07!1;DOID:4418!1.75e-07!1;DOID:3030!5.45e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.37e-29;1!DOID:3165;2.37e-29;1!DOID:0060121;2.37e-29;1!DOID:2438;2.37e-29;1!DOID:4418;2.37e-29;1!DOID:200;2.05e-15;2!DOID:4305;2.05e-15;2!DOID:0060072;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.78e-29,1;DOID:3165,1.78e-29,1;DOID:0060121,1.78e-29,1;DOID:2438,1.78e-29,1;DOID:4418,1.78e-29,1;DOID:200,1.78e-15,2;DOID:4305,1.78e-15,2;DOID:0060072,2.11e-08,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000014;2.26e-08;4!UBERON:0004797;2.26e-08;4!UBERON:0000415;2.26e-08;4!UBERON:0007240;2.26e-08;4!UBERON:0005742;2.26e-08;4!UBERON:0005734;2.26e-08;4!UBERON:0004664;2.26e-08;4!UBERON:0002119;2.26e-08;4!UBERON:0004663;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,1.96e-08,4;UBERON:0000014,2.11e-08,4;UBERON:0000415,2.61e-08,4;UBERON:0007240,2.61e-08,4;UBERON:0005742,2.61e-08,4;UBERON:0005734,2.61e-08,4;UBERON:0004664,2.61e-08,4;UBERON:0004663,2.61e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05927344650575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7212030400459,0.528290604079356,0,0.432359860250884,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0,0,0.728163130497081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.593042257361244,0.617819694732514,0.104421949505455,0,0,0,0,0,0,0,0,0,0,2.55549813004637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,1.58971689362392,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0.887130899937803,0,1.79921244865442,0.155262956876259,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743614585554013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:81662329..81662343,- | |||
}} |
Latest revision as of 03:27, 31 July 2015
Short description: | p@chr6:81662329..81662343, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:81662329..81662343, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.78e-15 | 2 |
osteocyte | 1.78e-15 | 2 |
osteoclast | 1.78e-15 | 2 |
fibroblast of tunica adventitia of artery | 2.61e-08 | 4 |
fibroblast of the aortic adventitia | 2.61e-08 | 4 |
mast cell | 4.79e-07 | 5 |
basophil mast progenitor cell | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
left ovary | 1.96e-08 | 4 |
zone of skin | 2.11e-08 | 4 |
artery wall | 2.61e-08 | 4 |
tunica adventitia of artery | 2.61e-08 | 4 |
adventitia | 2.61e-08 | 4 |
tunica adventitia of blood vessel | 2.61e-08 | 4 |
aorta tunica adventitia | 2.61e-08 | 4 |
aorta wall | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.78e-29 | 1 |
skin benign neoplasm | 1.78e-29 | 1 |
integumentary system benign neoplasm | 1.78e-29 | 1 |
dermis tumor | 1.78e-29 | 1 |
cutaneous fibrous histiocytoma | 1.78e-29 | 1 |
giant cell tumor | 1.78e-15 | 2 |
bone giant cell tumor | 1.78e-15 | 2 |
benign neoplasm | 2.11e-08 | 4 |