Personal tools

FFCP PHASE1:Mm9::chr2:126501847..126501876,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=14391|HGNC=|MCL_coexpression_id=267|UniProt=Q3UT69|association_with_transcript=196bp_to_ENSMUST00000039978,uc008mdy.1_5end|description=CAGE_peak_5_at_Gabpb1_5end|id=chr2:126501847..126501876,-|ontology_enrichment_celltype=CL:0000838!2.10e-09!12;CL:0000084!7.98e-09!11;CL:0000827!7.98e-09!11;CL:0000542!3.82e-08!13;CL:0000051!3.82e-08!13;CL:0000791!8.62e-08!9;CL:0000789!8.62e-08!9;CL:0002420!8.62e-08!9;CL:0002419!8.62e-08!9;CL:0000790!8.62e-08!9;CL:0000624!4.93e-07!8;CL:0000738!8.69e-07!17;CL:0002087!8.69e-07!17|ontology_enrichment_celltype_v019_2=CL:0000838,1.00e-26,12;CL:0000791,4.53e-25,9;CL:0000789,4.53e-25,9;CL:0002420,4.53e-25,9;CL:0002419,4.53e-25,9;CL:0000790,4.53e-25,9;CL:0000084,1.57e-24,11;CL:0000827,1.57e-24,11;CL:0000542,1.70e-24,13;CL:0000051,1.70e-24,13;CL:0000624,3.22e-22,8;CL:0000988,1.84e-21,32;CL:0002032,1.84e-21,32;CL:0000037,1.84e-21,32;CL:0000837,1.84e-21,32;CL:0000738,3.34e-18,17;CL:0002087,3.34e-18,17;CL:0002320,1.17e-17,46;CL:0000134,1.17e-17,46;CL:0000893,9.58e-17,6;CL:0002489,9.58e-17,6;CL:0000898,9.58e-17,6;CL:0000809,9.58e-17,6;CL:0000810,9.58e-17,6;CL:0000895,9.58e-17,6;CL:0000808,9.58e-17,6;CL:0000894,9.58e-17,6;CL:0000806,9.58e-17,6;CL:0000807,9.58e-17,6;CL:0000805,9.58e-17,6;CL:0002425,9.58e-17,6;CL:0002436,9.58e-17,6;CL:0002427,9.58e-17,6;CL:0002428,9.58e-17,6;CL:0002429,9.58e-17,6;CL:0002433,9.58e-17,6;CL:0002431,9.58e-17,6;CL:0002432,9.58e-17,6;CL:0000219,2.02e-14,54;CL:0000034,6.68e-13,97;CL:0002031,1.16e-11,25;CL:0000723,4.90e-10,91;CL:0000048,4.90e-10,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,6.73e-09,3;DOID:4045,6.73e-09,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.17e-17,46|phase1_expression=0,1.04692622291808,0,0.30246421130683,0,0.33575854382378,0,8.26389270026088,32.3814060948834,23.1723881058774,3.5955773327356,2.39316476986009,4.10881751834894,6.99363219351979,0,0.202475267389826,0,0.315462165358238,0.822686601634433,0,0.850432901510698,1.29078236561151,0.783599367416806,0,0,0,0,0.861884930743556,0,0.252030129759931,0,0,0,0,0.577703239502549,0,0.612508068787107,5.02237956884289,5.4693474116666,4.18818995179039,11.1763982725893,6.14740936462601,5.82612423637384,0,0.304130793658544,0.367093504323363,0,0,0,0,0,0,1.8456086666351,14.5072428402269,17.1407837562657,0.514518872071894,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0,0,0.383062014255563,0,0.395658863190582,0.365950574409639,0,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0,0.227178579999552,0.151143120213571,1.73918693221007,0.860423876981386,8.15965600449301,0,0,0.448026887097336,0.140444420131752,0,0.519572009205738,0,0,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0.505524445014783,0.45673551887624,0.517875767294343,0.742210695324124,0,0,0,0.301445281105245,0.587943535678524,0,0.494389935468748,0,0.884610551949874,0,0,0,0,0.292780797011547,0,0.510914110417183,5.39168060276641,2.39961092397363,4.70159840170339,0.449371918214468,0.457500602818626,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0.340182495756639,0.12811372028485,0.187403449119458,0,0.646703978798527,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0,0.199034266818493,4.21327912387941,2.05878325691772,2.27330799516474,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0.387904974335251,0.140271639780637,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0.482443521363367,0.184753190166605,0,0,0.169745085775188,0.704070744865506,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.518054945597687,0.433947175744535,0,0.54390568381871,0.491764273019036,0.275936746304732,0.321101179975584,0,0.163934945376675,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.540183282093931,0,0,0,0.356737635204141,0.658196082408484,1.2178597964584,0.938686832254841,0.42366414172764,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0,0,0,11.0485979496006,8.39708713941948,10.5031980091362,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0.621339313086926,6.76431526421028,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0.13020438484395,0.209718688851422,0.241584120826006,3.74439008135225,0,0,0.308132871494482,0.649604114888975,0.358053391334963,0.39736270956253,0,0.738447635872886,0.605798699688886,0.457240839929999,0.403304740547362,0.584747284438515,0.673482891482306,0.818138315270983,0,0.221985953374065,0.179427713218951,0.335769232728157,0,0.187682475451182,0,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.207574695168353,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0.505394423527595,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.441182838239031,0|short_description=p5@Gabpb1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14391
|HGNC=
|MCL_coexpression_id=267
|TSSclassifier=NA
|UniProt=Q3UT69
|association_with_transcript=196bp_to_ENSMUST00000039978,uc008mdy.1_5end
|cluster_id=chr2:126501847..126501876,-
|description=CAGE_peak_5_at_Gabpb1_5end
|id=chr2:126501847..126501876,-
|ontology_enrichment_celltype=CL:0000838!2.10e-09!12;CL:0000084!7.98e-09!11;CL:0000827!7.98e-09!11;CL:0000542!3.82e-08!13;CL:0000051!3.82e-08!13;CL:0000791!8.62e-08!9;CL:0000789!8.62e-08!9;CL:0002420!8.62e-08!9;CL:0002419!8.62e-08!9;CL:0000790!8.62e-08!9;CL:0000624!4.93e-07!8;CL:0000738!8.69e-07!17;CL:0002087!8.69e-07!17
|ontology_enrichment_celltype_v019_2=CL:0000838,1.00e-26,12;CL:0000791,4.53e-25,9;CL:0000789,4.53e-25,9;CL:0002420,4.53e-25,9;CL:0002419,4.53e-25,9;CL:0000790,4.53e-25,9;CL:0000084,1.57e-24,11;CL:0000827,1.57e-24,11;CL:0000542,1.70e-24,13;CL:0000051,1.70e-24,13;CL:0000624,3.22e-22,8;CL:0000988,1.84e-21,32;CL:0002032,1.84e-21,32;CL:0000037,1.84e-21,32;CL:0000837,1.84e-21,32;CL:0000738,3.34e-18,17;CL:0002087,3.34e-18,17;CL:0002320,1.17e-17,46;CL:0000134,1.17e-17,46;CL:0000893,9.58e-17,6;CL:0002489,9.58e-17,6;CL:0000898,9.58e-17,6;CL:0000809,9.58e-17,6;CL:0000810,9.58e-17,6;CL:0000895,9.58e-17,6;CL:0000808,9.58e-17,6;CL:0000894,9.58e-17,6;CL:0000806,9.58e-17,6;CL:0000807,9.58e-17,6;CL:0000805,9.58e-17,6;CL:0002425,9.58e-17,6;CL:0002436,9.58e-17,6;CL:0002427,9.58e-17,6;CL:0002428,9.58e-17,6;CL:0002429,9.58e-17,6;CL:0002433,9.58e-17,6;CL:0002431,9.58e-17,6;CL:0002432,9.58e-17,6;CL:0000219,2.02e-14,54;CL:0000034,6.68e-13,97;CL:0002031,1.16e-11,25;CL:0000723,4.90e-10,91;CL:0000048,4.90e-10,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,6.73e-09,3;DOID:4045,6.73e-09,3
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.17e-17,46
|phase1_expression=0,1.04692622291808,0,0.30246421130683,0,0.33575854382378,0,8.26389270026088,32.3814060948834,23.1723881058774,3.5955773327356,2.39316476986009,4.10881751834894,6.99363219351979,0,0.202475267389826,0,0.315462165358238,0.822686601634433,0,0.850432901510698,1.29078236561151,0.783599367416806,0,0,0,0,0.861884930743556,0,0.252030129759931,0,0,0,0,0.577703239502549,0,0.612508068787107,5.02237956884289,5.4693474116666,4.18818995179039,11.1763982725893,6.14740936462601,5.82612423637384,0,0.304130793658544,0.367093504323363,0,0,0,0,0,0,1.8456086666351,14.5072428402269,17.1407837562657,0.514518872071894,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0,0,0.383062014255563,0,0.395658863190582,0.365950574409639,0,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0,0.227178579999552,0.151143120213571,1.73918693221007,0.860423876981386,8.15965600449301,0,0,0.448026887097336,0.140444420131752,0,0.519572009205738,0,0,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0.505524445014783,0.45673551887624,0.517875767294343,0.742210695324124,0,0,0,0.301445281105245,0.587943535678524,0,0.494389935468748,0,0.884610551949874,0,0,0,0,0.292780797011547,0,0.510914110417183,5.39168060276641,2.39961092397363,4.70159840170339,0.449371918214468,0.457500602818626,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0.340182495756639,0.12811372028485,0.187403449119458,0,0.646703978798527,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0,0.199034266818493,4.21327912387941,2.05878325691772,2.27330799516474,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0.387904974335251,0.140271639780637,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0.482443521363367,0.184753190166605,0,0,0.169745085775188,0.704070744865506,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.518054945597687,0.433947175744535,0,0.54390568381871,0.491764273019036,0.275936746304732,0.321101179975584,0,0.163934945376675,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.540183282093931,0,0,0,0.356737635204141,0.658196082408484,1.2178597964584,0.938686832254841,0.42366414172764,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0,0,0,11.0485979496006,8.39708713941948,10.5031980091362,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0.621339313086926,6.76431526421028,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0.13020438484395,0.209718688851422,0.241584120826006,3.74439008135225,0,0,0.308132871494482,0.649604114888975,0.358053391334963,0.39736270956253,0,0.738447635872886,0.605798699688886,0.457240839929999,0.403304740547362,0.584747284438515,0.673482891482306,0.818138315270983,0,0.221985953374065,0.179427713218951,0.335769232728157,0,0.187682475451182,0,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.207574695168353,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0.505394423527595,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.441182838239031,0
|short_description=p5@Gabpb1
}}

Latest revision as of 16:06, 25 September 2015

Short description:p5@Gabpb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Gabpb1_5end
Coexpression cluster:MCL_coexpression_mm9:267
Association with transcript: 196bp_to_ENSMUST00000039978, uc008mdy.1_5end
EntrezGene:Gabpb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Gabpb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E732.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F223.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.99
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I914.51
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.14
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.70
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.50
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell1.00e-2612
mature alpha-beta T cell4.53e-259
alpha-beta T cell4.53e-259
immature T cell4.53e-259
mature T cell4.53e-259
immature alpha-beta T cell4.53e-259
T cell1.57e-2411
pro-T cell1.57e-2411
lymphocyte1.70e-2413
common lymphoid progenitor1.70e-2413
CD4-positive, alpha-beta T cell3.22e-228
hematopoietic cell1.84e-2132
hematopoietic oligopotent progenitor cell1.84e-2132
hematopoietic stem cell1.84e-2132
hematopoietic multipotent progenitor cell1.84e-2132
leukocyte3.34e-1817
nongranular leukocyte3.34e-1817
connective tissue cell1.17e-1746
mesenchymal cell1.17e-1746
thymocyte9.58e-176
double negative thymocyte9.58e-176
naive T cell9.58e-176
double-positive, alpha-beta thymocyte9.58e-176
CD4-positive, alpha-beta thymocyte9.58e-176
naive thymus-derived CD4-positive, alpha-beta T cell9.58e-176
DN4 thymocyte9.58e-176
DN1 thymic pro-T cell9.58e-176
DN2 thymocyte9.58e-176
DN3 thymocyte9.58e-176
immature single positive thymocyte9.58e-176
early T lineage precursor9.58e-176
mature CD4 single-positive thymocyte9.58e-176
resting double-positive thymocyte9.58e-176
double-positive blast9.58e-176
CD69-positive double-positive thymocyte9.58e-176
CD69-positive, CD4-positive single-positive thymocyte9.58e-176
CD4-positive, CD8-intermediate double-positive thymocyte9.58e-176
CD24-positive, CD4 single-positive thymocyte9.58e-176
motile cell2.02e-1454
stem cell6.68e-1397
hematopoietic lineage restricted progenitor cell1.16e-1125
somatic stem cell4.90e-1091
multi fate stem cell4.90e-1091

Uber anatomy
Ontology termp-valuen
connective tissue1.17e-1746

Disease
Ontology termp-valuen
musculoskeletal system cancer6.73e-093
muscle cancer6.73e-093
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:126501847..126501876,-&oldid=4201047"