FFCP PHASE1:Hg19::chr7:142494338..142494355,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_uc003wbh.3_5end | |||
|cluster_id=chr7:142494338..142494355,+ | |||
|coexpression_cluster_id=C861 | |||
|description=CAGE_peak_2_at_uc003wbh.3_5end | |||
|id=chr7:142494338..142494355,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.31e-25!53;CL:0000051!1.31e-25!53;CL:0000838!9.06e-25!52;CL:0000084!7.67e-15!25;CL:0000827!7.67e-15!25;CL:0000791!1.03e-13!18;CL:0000789!1.03e-13!18;CL:0002420!1.03e-13!18;CL:0002419!1.03e-13!18;CL:0000790!1.03e-13!18;CL:0000236!2.53e-11!14;CL:0000625!2.24e-09!11;CL:0000945!3.41e-09!24;CL:0000826!3.41e-09!24;CL:0002087!5.31e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.52e-22;53!CL:0000084;3.17e-20;25!CL:0000791;5.49e-19;18!CL:0000789;5.49e-19;18!CL:0002419;5.49e-19;18!CL:0000236;3.22e-16;13!CL:0000945;2.51e-14;24!CL:0000625;7.28e-14;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.20e-38,53;CL:0000051,3.20e-38,53;CL:0000838,6.67e-37,52;CL:0000084,3.28e-20,25;CL:0000827,3.28e-20,25;CL:0000791,5.97e-19,18;CL:0000789,5.97e-19,18;CL:0002420,5.97e-19,18;CL:0002419,5.97e-19,18;CL:0000790,5.97e-19,18;CL:0000236,2.33e-17,14;CL:0000945,2.49e-14,24;CL:0000826,2.49e-14,24;CL:0002087,6.63e-14,115;CL:0000625,7.42e-14,11;CL:0000738,1.76e-11,136;CL:0002031,7.51e-10,120;CL:0000037,4.63e-09,168;CL:0000988,8.36e-09,177;CL:0002032,6.47e-08,161;CL:0000837,6.47e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000051;1.52e-22;53!CL:0000790;5.49e-19;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!7.73e-08!110;UBERON:0001009!3.45e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.83e-10;15!UBERON:0000179;3.83e-10;15!UBERON:0000463;3.83e-10;15!UBERON:0001638;5.44e-09;9!UBERON:0003920;5.44e-09;9!UBERON:0004582;5.44e-09;9!UBERON:0002390;1.16e-07;32!UBERON:0002193;9.97e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.07e-10,15;UBERON:0000179,4.07e-10,15;UBERON:0000463,4.07e-10,15;UBERON:0001638,3.64e-09,9;UBERON:0003920,3.64e-09,9;UBERON:0004582,3.64e-09,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,4.91467873003018,2.09340350391728,4.36882744260345,4.74780560811216,0,0,0,0,0,0,0.61560529038394,3.4680117511523,0,0,0,0,2.9801228241701,2.13461532569859,3.06972047123349,3.14691421479123,1.91914699048606,2.01260960310899,0,0,0,0,6.68195392690881,4.40400659002271,2.21598163412751,1.60435557976113,1.30206522429511,0.447830948479849,0.32389366601898,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,22.879511779972,22.9378216730095,28.4642961236338,29.444385357089,26.8265311314128,24.1396024780883,21.8144808019005,26.7135051269902,9.10740750575117,4.11066032559657,9.93910393125595,5.28685314316103,1.68152568894461,2.63384084775077,0.590129310341499,1.57204305099666,4.11202997999018,6.18590032945509,7.49621213257258,7.57516489175573,11.6896037044747,7.79873198196215,8.83817722424511,9.30442357251209,9.47813523177554,8.06975314271754,6.76308607311367,7.07082989795807,6.07970039128866,7.82468331484642,5.48660283699624,7.75868401460168,8.36284190439814,6.68525121915641,5.3650869104269,5.49803912772208,8.09663014462409,6.37130828648194,8.46408490013344,5.70271226669025,7.22760571573309,7.42322344695627,7.49584359314075,4.49876778883632,9.03240796613151,5.44338206706778,4.01160293675261,1.88271725047639,0,0,0,0,0,0,0,0,0.283604451492204,1.33037638477538,2.54720878510066,0.327447688744282,0,0,0,0,0,0.238490624305342,0,0,0.39752481473341,0.860234595106124,2.42998351125316,2.82653970962005,2.09749718104953,0.825354125820202,0.835979866147242,0,0,0,0,0,0,1.83831540172934,0.81014194788176,1.69669483739752,1.79623498100936,1.57656072676651,7.66583187329416,1.89853131913626,2.38162267109529,0,0,0,0,2.27934920996244,0,0.573673241497627,2.12801029319014,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0.605429710579726,0.576175924479999,1.87457145467037,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0,11.8320977051943,4.31170885089743,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.339121184620975,0,0,0.286804595389004,0,0,0.232387885739037,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,3.9096996637239,2.07986957055916,2.88662684050547,0,0.939269553886573,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0.517086863031111,0,0,0.797814349754612,0,0,0,0,0.142977993658148,3.7983512377401,5.76268235746538,0,0,2.37585561880029,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,16.2523458790615,9.06341496928865,7.76259269494262,6.16046574142792,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0,0,0,0,0,0,0,1.99267679560631,0.368738337083406,0,0.195801157462741,0.686286847621712,3.72182447021197,1.2942852049117,4.26910231213777,1.81876542867756,6.65741758041988,1.20956117331872,0,0,0,0,0,0,0,0,0,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,1.95184561879831,1.45672934405374,0,2.25599806453706,0.231046011313244,0.784349769176855,0,0.633309773357254,0,0,0.215915916102139,0,1.08378575017541,2.50844886927427,1.01950509218015,1.66215201785745,0.895499018888713,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0.384380134730212,0,0.2023155617111,0,0,0,0,1.06461206063404,1.73986598415015,0,0.572499546967965,0.744316738719335,1.89827654831236,0.38126038784765,1.535386747868,0,0.318203247925937,0.78494864019923,0.359744915166629,1.37268514868027,1.41374882814824,1.01091240786658,0,0,2.92580243453754,0.243713489631284,0,3.13949796238367,0.282810863907425,0,1.10273068709225,0,0.438450885253763,4.05142873986681,1.9676842561399,0.405820753925408,1.8589409885985,2.53526042279017,6.16668814477421,2.55447506634115,0,2.83808851256478,0,0,3.41525856389144,1.39973888097993,0,0.670302275535787,0,0.0941438007767792,1.72202149068492,1.68471475667626,0.886860307073351,0.459446800413919,5.58192370155386,2.29391162142713,3.98753031021914,6.19402616190251,8.63860773481008,3.24236655596359,4.32025149790492,5.55187623405989,0,0,0,13.3778286090517,0,0,4.62336190913585,1.39705560002972,2.68107518185313,0,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.66614393599564,0,0,0.293016358543788,0,9.13835751075323,0,0,0,0,0.994147647766298,0,0,0.494411622680279,0,0.19924798825107,4.42054264849836,0,0.102268682502155,0,0,0,0,0,0.197286811273867,4.7896618469388,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.886642856860642,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0.31900115973192,1.4655614944298,0.533034776018635,19.4167266571899,0,0,0,0,0.335643173951685,0.189753732724185,0,0,0,0,0,0.995261931078505,0.265372693510018,0.611030144933625,0,0,0,0.404406797884062,0,2.10838001152805,10.94728735294,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.685209623233754,0,0.759729551470544,0,0.08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| |||
|short_description=p2@uc003wbh.3 | |||
}} |
Latest revision as of 06:57, 31 July 2015
Short description: | p2@uc003wbh.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc003wbh.3_5end |
Coexpression cluster: | C861_CD19_chronic_NK_Natural_lymphangiectasia_acute_CD8 |
Association with transcript: | -11bp_to_uc003wbh.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.20e-38 | 53 |
common lymphoid progenitor | 3.20e-38 | 53 |
lymphoid lineage restricted progenitor cell | 6.67e-37 | 52 |
T cell | 3.28e-20 | 25 |
pro-T cell | 3.28e-20 | 25 |
mature alpha-beta T cell | 5.97e-19 | 18 |
alpha-beta T cell | 5.97e-19 | 18 |
immature T cell | 5.97e-19 | 18 |
mature T cell | 5.97e-19 | 18 |
immature alpha-beta T cell | 5.97e-19 | 18 |
B cell | 2.33e-17 | 14 |
lymphocyte of B lineage | 2.49e-14 | 24 |
pro-B cell | 2.49e-14 | 24 |
nongranular leukocyte | 6.63e-14 | 115 |
CD8-positive, alpha-beta T cell | 7.42e-14 | 11 |
leukocyte | 1.76e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 7.51e-10 | 120 |
hematopoietic stem cell | 4.63e-09 | 168 |
hematopoietic cell | 8.36e-09 | 177 |
hematopoietic oligopotent progenitor cell | 6.47e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.47e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 4.07e-10 | 15 |
haemolymphatic fluid | 4.07e-10 | 15 |
organism substance | 4.07e-10 | 15 |
vein | 3.64e-09 | 9 |
venous blood vessel | 3.64e-09 | 9 |
venous system | 3.64e-09 | 9 |