FFCP PHASE1:Hg19::chr7:23286379..23286401,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10457 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4462 | |||
|TSSclassifier=strong | |||
|UniProt=F5GY20,F6SKP1 | |||
|association_with_transcript=0bp_to_ENST00000453162,ENST00000459927,ENST00000474157,ENST00000487890,ENST00000539136_5end | |||
|cluster_id=chr7:23286379..23286401,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_1_at_GPNMB_5end | |||
|id=chr7:23286379..23286401,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.07e-12!180;CL:0000057!5.88e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.33e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.03e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!3.35e-18!511;UBERON:0000468!8.87e-17!659;UBERON:0000467!4.87e-14!625;UBERON:0000480!9.84e-14!626;UBERON:0003102!1.18e-12!95;UBERON:0002204!1.08e-10!167;UBERON:0002050!6.05e-09!605;UBERON:0005423!6.05e-09!605;UBERON:0000923!7.42e-09!604;UBERON:0005291!7.42e-09!604;UBERON:0006598!7.42e-09!604;UBERON:0002532!7.42e-09!604;UBERON:0000922!1.40e-08!612;UBERON:0002199!1.32e-07!45;UBERON:0002416!1.32e-07!45;UBERON:0000165!2.64e-07!28;UBERON:0000930!2.64e-07!28;UBERON:0004765!6.20e-07!101;UBERON:0001434!6.20e-07!101;UBERON:0002097!8.15e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;2.03e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.32e-13,99;UBERON:0002204,7.60e-12,167;UBERON:0002050,1.53e-09,564;UBERON:0000923,2.99e-09,560;UBERON:0010316,2.99e-09,560;UBERON:0005291,2.99e-09,560;UBERON:0006598,2.99e-09,560;UBERON:0010317,2.99e-09,560;UBERON:0002532,2.99e-09,560;UBERON:0000926,6.12e-09,315;UBERON:0004120,6.12e-09,315;UBERON:0006603,6.12e-09,315;UBERON:0005423,2.29e-08,581;UBERON:0002199,2.92e-08,46;UBERON:0002416,2.92e-08,46;UBERON:0004923,3.45e-08,66;UBERON:0000165,1.04e-07,29;UBERON:0000930,1.04e-07,29;UBERON:0001434,1.16e-07,100;UBERON:0002097,1.88e-07,41;UBERON:0000922,5.03e-07,592 | |||
|phase1_expression=468.003505000954,246.429702998522,348.580241329337,146.10701559557,201.13249249228,127.361424518654,25.3299878168311,424.51575494283,93.765640523742,1.22866968250754,0,0,11.605747042052,52.1056345961796,34.7967244514312,131.775728704548,19.2862248967673,19.7183724404591,17.0776479576677,0.369363174230364,0.204000691244253,0,4.57977579409691,0.273748850145768,0.627713197974014,0.687720651731561,0.164201178899891,0.0787107813136792,0.786728553697808,1.15148819429164,5.41856431606266,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0,1.66198622559563,1.20326668482085,0.434021741431704,9647.1742921529,11614.1790761086,9705.18981288852,46.2366399319016,280.006074273408,93.8800316796849,59.0369753740439,291.518032607474,178.081163264685,8.05538698502021,30.483124076963,29.5602787360732,16.8925383560943,111.668850260002,81.2558919566051,62.3082143886022,404.719820535785,221.352632178408,22.038040250705,209.887583707765,74.1631065926888,6.26717470354761,29.9195486432448,15.7703157697097,9.57690487474327,43.1212770765266,36.7465126907389,16.3311632416883,62.056467292004,49.9534342821768,21.1889825921679,74.7603601054756,54.1150682523912,5.28138215779854,4.889898899196,5.2414661377094,0.22465726229299,1.35159203557356,1.44653028027372,0.570025487482497,0.79566670879636,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,80.4562658836074,9.38981203585091,12.9141187461966,100.841523515294,30.0802746381534,124.568006306308,278.350081467885,36.4976152726977,1.70162670895322,0.886917589850256,2.63504357079378,84.8744409225178,8.74308691902101,7.04490441290416,304.425455248093,321.791754529046,644.846108516496,0.953962497221368,0.571994910780128,0,0,10.3228151412735,0,0,0,0,0,15.7634223093291,160.09481820902,22.0915604424682,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0.366403487860815,0,0,0,3.47880366186723,88.3880971418767,535.462727208657,692.423602487636,98.5978102511433,30.8372680078269,2.1349799145941,9.37336683985208,204.465650257646,13.0669351907597,11.4423332179421,7.11379909931178,3.45705554687999,30.4617861383936,203.840530170199,65.0337876560672,193.386592634031,25.483286205697,19.5866262685439,24.5788911728935,147.399311646033,60.0659811654545,205.411652977422,813.781957238207,322.18880884996,2.73048408581408,1.43723628363248,83.3263764072628,27.901429931448,179.260482718266,28.0945677363736,80.6062902951422,365.07848314303,11.7969470486422,84.1337391380763,167.428992833757,78.6267353301974,122.437167202436,101.609793829101,92.2353133363352,111.483996942622,242.869142095182,70.0572067109018,61.0889733670757,149.028785901883,511.60976983154,143.068865784196,57.9324564808932,31.5382701697507,142.239987928186,73.6414525595253,47.6095628345746,0.243947412259191,0.132529768321485,0.348581828608555,4.35376431064556,0.504641701751257,0.36497735907583,23.4674298494724,63.0376119429028,17.9575397758225,240.078218792533,363.105379279802,39.8693916134274,39.4488174782758,24.3421140182317,34.4117194925069,44.2295271507585,28.7097449124427,40.7190550643697,50.6251380023393,24.623818044569,0,0,8.231480226628,7.3504355692771,2.53510069643662,4.91413608338813,12.4065880403095,0,0.614942192715568,143.773825030164,65.1916695327236,8.99214026060957,15.3809327789795,24.6285264121689,87.6424341284773,15.5990217791937,0,6.14431146367907,15.145721556421,0.288732895522148,0,0,7.11183958163348,8.58486162094873,5198.62586652931,2267.50132919921,1980.5102374973,102.169879045587,13.9425166405053,14.4610599187234,9.22452783839337,9.30028603244678,4.98397482914775,345.356929765056,105.482023947845,242.573895182703,174.385143634523,289.852627146968,1410.98670906629,1015.70722355946,975.249160787591,304.508953920415,921.128679636372,938.271712704398,2228.58869522062,40.1429281956391,22.6699235793306,37.0358343395798,424.269771117027,178.828222925941,70.160128462148,552.885344379946,229.856435574119,5.65856223376713,1.41849132023278,1.3321108950805,19.1590511501918,35.8130259558352,2.46972101034231,91.8576039708333,16.7034215908997,2.37585561880029,266.170969943615,188.251227057664,48.6868467056618,12421.4367168848,9751.82368724617,7145.16220907994,300.489568786445,233.169729743251,12.8373214536647,107.282948240676,69.65647334458,116.031504179452,0,0,0,0,32.5241119004753,5.20559415430487,3.09315525111078,73.0370916857761,0.637938751653163,0,0,0,81.9579164683854,21.5073324055661,55.8805948821455,69.8782094743512,71.1931665300675,233.084169420155,106.715829058362,199.527264119478,479.829833558128,404.579708753694,25.2405727443466,11.9839959552107,509.051097168497,29.5659747768738,15.4414540714885,1.6541442089831,0.647142602455851,0.533637789017222,11.5188477149579,6.65741758041988,14.212343786495,285.572086799412,327.180927050149,204.039888652844,526.139346843908,223.616067842149,134.313024154912,112.797730498193,39.1692622258745,56.2870669242613,104.712123917607,110.081938986928,53.4567740915813,0.483437798366489,11.8298817478938,1.47329582297434,43.7443047507152,135.293737828991,285.326726951707,11.7311899355927,38.815729900625,3.13739907670742,4.38417673959782,10.6607145181804,0,0.340187410553031,0,0,0.541892875087706,0.501689773854853,7.39141191830611,4.98645605357235,2.23874754722178,0.877039506583738,0.784306353074702,1010.15704283346,555.328795169602,1286.87155089732,152.809820273572,45.6931629443534,89.2752789140762,109.110452219273,53.9550004210313,14.4615536859744,7.25030387190915,26.9585079950628,20.2624850638491,9.9242332188862,105.486680460645,43.795041562097,32.6417983003666,35.256686116108,12.3963686520734,1.72971060628596,0.510450849978337,6.37294019389965,3.71876439437829,425.941105261856,23.6992671854604,38.196163941835,13.8399567882426,31.3175877147026,42.8098946130055,3.57812216854978,211.385953796291,371.429444619784,86.9273684292641,33.7785084530961,337.643861558763,11.1371136774078,3.13979456079692,174.476283855815,88.1263865452736,48.7743345711142,12.7374963391189,4.75530963519025,34.5431934115964,2.43816869544795,70.1894850138099,6.33900880540533,55.2824641202342,41.2903861304841,28.2520291550607,16.5409603063837,18.5762913067542,16.2226827543892,102.443269565204,480.770853250182,32.2627499370699,34.0805847909725,2.25356482025793,41.876114843583,3.34046739444612,32.1003946333125,192.990018854405,175.852660202954,127.437123575482,22.3889172521772,20.646148494454,2.11688647996127,20.7793705416094,0,153.548539066927,1.72202149068492,5.05414427002877,18.1806362950037,16.3103614146941,0,0,0.569647187174163,0.238231775457789,0,0,1.08006287447623,0,24.1422400748089,0,79.3930299778543,0,0,0,0.159426272728822,0,0,0,0.324621940274555,0.842391534340376,2.51058146936511,0.156679895773023,20.0507581672054,0,0,0,0,0,5.22309299324379,25.4990762997354,9.67725021929069,107.26806437572,0.278406173895242,0,0,0,0,0,685.658278992464,0,0.111443384277478,0,53.7175090659803,77.5077816973187,76.4830148227088,61.6371541615105,15.4736358051564,2.67140892054974,0,0,166.372070189643,51.1125243732623,0,23.8286030230021,0,144.011329087417,0,2.32727527078292,0,161.577898433297,0,73.3504134954603,11.6319929531426,25.6967631908328,5.98841394003583,14.0630990986026,0,165.299903199133,245.452467951823,2.03402920234213,0.709163045303809,0,0.291604613383254,7.11862479226498,45.1728106765058,6.0298219312704,13.7323562685375,2.10100593869327,2.65992857058193,32.03026798448,34.5334929355199,743.68625198207,247.087280055692,134.907394122849,0,0.0897576444097721,0,63.8002319463839,112.573442290889,144.985459077069,0,0,0.498635045700469,0,0,0,0,0,0,0.816164040795739,0,0.216388639742091,33.8389056566692,101.106996227317,36.0507785510839,0,0,0,38.8904537298507,40.1288823649394,14.7586600806964,0,330.281876757367,0,46.5609595362281,7.25944296291983,3.0607276163049,116.010560197904,0.450970258243478,0.72581733978073,0,0,0,0,140.597115738718,1.24807205711825,20.8271686002157,7.4474222034927,0.435296032902013,174.551941573788,675.389149516038,0,0.365446585430928,0.0821154570532092,156.540272612309,0.264768380074501,206.320416332626,1.37041924646751,10.7305890319614,25.2610075863956,33.4392864476513,4.08809983282822,74.9220011535128,18.7821033007202,0,0,0,0.14405479798815,2.85780831800495,0,109.946502713554,126.88325257686,9.48583424017793,56.9232662105992,21.0147101048426,6.02383667124769,0,0,0,134.614117413227,301.804278423387,25.1255558601885,45.726491114269,100.009669215821,95.9637267000052,454.56337484519,14.0516954581537,0,0,0,0,3.44496185301621,0.0846733320657845,40.5567141802745,14.8461712661617,0.321506296930038,0,0,4.49947783103001,41.0115035915713,26.1830589196086,1102.23838345119,49.9628184276916,55.444499658693,0.316801009558219,0,1.53532157855556,313.751248277908,85.4098641771407,0,121.631910792832,48.396403507271,24.4940520082057,31.1298498062467,0.246277562248017,45.1528257731368,11.1045849689723,22.4224917527466,9.27548222385549,15.6432377197476,9.52074732547368,1.02652102730598,7.75296524548339,369.164085246521,21.0653768833552,191.378443570404,108.660358776817,0,0,408.538404972916,14.6884806909758,17.548292581589,32.4726311369269,36.0659893780785,35.1801175600525,37.2148635586134,30.8726450201967,12.268711209237,141.058662139758,50.2508603461941,47.3795554442756,0.553394539744923,0,1050.62508632854,816.430853938607,0.470531639396343,0,0,84.7767280397445,161.729610414279,132.043795037622,555.897820482387,565.776211041541,435.117687360706,411.683283046066,540.045628758527,157.457884190357,258.007236731911,61.010661823698,296.870054027979,53.7209830791857,294.856113774848,168.543647029769,121.044854340322,190.075875381481,229.244737725615,99.6833296351421,125.475574849766,60.3647330578785,433.407531726513,55.7334244178062,0.400027764663154,125.682828096902,120.556316978199,3.78554694685953,4.04501643855337,15.8686777617445,1.82696004375648,65.744718398559,7.17719670403885,0.734210113519403,18.9834171546377,7.41123473186333,101.967083054099,0.883445729729405,4.82285095677287,4.89933077893911,3.07489822305536,421.079586570331,173.200175021108,8.9867983498625,37.0234586794838,3.45448584814744,40.7277831697052,114.991056945091,4.42391235756695,0.211312123358627,0,0,0.172214979660816,3.97261167496785,490.642357421156,104.629871774144,251.941290313354,0.127894371303652,0,0.157265941855896,1.96577348745625,0.848662649770126,0,0,2.23457967189298,6.99609571437521,0,0,127.668691616028,11.6373281394216,25.0493977876192,26.9223495018611,5.26791734888599,10.050701847797,3.52900374710405,13.969764997772,25.3516763642006,11.4215536207324,51.1349613390343,64.1755295011708,510.481789685833,5.19865497676522,29.747803446439,9.66503896484141,292.60576273304,190.507761708669,53.0484330690258,16.4117942358949,0,10.3176308031361,6.2099556211159,16.4791706468883,24.2134210570293,6.61397748803789,26.5078086610531,1.09394961803644,21.3820529074301,154.321676479071,1.40696995487696,29.5131207847465,284.45767485137,241.451712553116,7.28358725083958,13.2044070983753,233.464638268065,0.230467975111559,52.8183069067249,12.8462795326212,15.1935106930181,0.472775363535873,0,126.138400210776,30.4804244437044,30.549665801203,9.13158720509496,0.431855182437243,0,609.623445282702,0,0,4.17259853526191,5.61197955311177,523.635246839994,972.071008572951,702.319816403117,40.0111443702858,417.711962578896,511.791708983501,32.1774158145106,19.2449769577002,5.27350855629344,0,4.47421727191169,5.49641308245361,0,4.53200186031526,54.3086248269547,39.4336906654988,190.884420272242,0,0,7.13520544665411,0.22589216407792,0.219881033490858,3.17021971490014,51.3979892998911,1.31135736302374,0,114.729414580828,0,51.0402014498858,73.9645536814444,20.2874749240032,17.672419927533,40.1311329773975,28.1036391564796,0.0999411559249289,74.2784384599536,6.35210769088245,1.44434460040503,6.57302749421866,28.8999448544861,22.217635388475,0,26.2447152136931,6.98161104544604,8.99345628876181,64.355138142848,146.971849904791,29.8512327865414,0,1.74824915141913,0.253397002022874,4.38551967890521,29.3939145792117,23.2494095823158,10.5297166502798,133.370508864101,23.0449151934314,23.2167443048458,8.37807266481351,79.1098072852639,19.0451545170992,82.7383934999238,120.300796305373,10.8767906703195,30.486988815241,19.8074845179055,151.095423040491,65.3665605072887,126.352451455366,88.5052014545626,52.8929966908161,0.244209805832924,0.640364075266293,0,0,91.5099675373472,290.445671378491,31.7379019086276,177.091301933346,157.396106588183,0 | |||
|short_description=p1@GPNMB | |||
}} |
Latest revision as of 20:12, 17 September 2015
Short description: | p1@GPNMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPNMB_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000453162, ENST00000459927, ENST00000474157, ENST00000487890, ENST00000539136_5end |
EntrezGene: | GPNMB |
HGNC: | 4462 |
UniProt: | F5GY20F6SKP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.03e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.32e-13 | 99 |
musculoskeletal system | 7.60e-12 | 167 |
embryonic structure | 1.53e-09 | 564 |
germ layer | 2.99e-09 | 560 |
germ layer / neural crest | 2.99e-09 | 560 |
embryonic tissue | 2.99e-09 | 560 |
presumptive structure | 2.99e-09 | 560 |
germ layer / neural crest derived structure | 2.99e-09 | 560 |
epiblast (generic) | 2.99e-09 | 560 |
mesoderm | 6.12e-09 | 315 |
mesoderm-derived structure | 6.12e-09 | 315 |
presumptive mesoderm | 6.12e-09 | 315 |
developing anatomical structure | 2.29e-08 | 581 |
integument | 2.92e-08 | 46 |
integumental system | 2.92e-08 | 46 |
organ component layer | 3.45e-08 | 66 |
mouth | 1.04e-07 | 29 |
stomodeum | 1.04e-07 | 29 |
skeletal system | 1.16e-07 | 100 |
skin of body | 1.88e-07 | 41 |
embryo | 5.03e-07 | 592 |