FFCP PHASE1:Hg19::chr7:31855735..31855746,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:31855735..31855746,- | |||
|description=CAGE_peak_at_chr7:31855735..31855746,- | |||
|id=chr7:31855735..31855746,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.55e-07;3!CL:0000388;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.32e-07,3;CL:0000388,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.47e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;2.47e-19;1!DOID:2513;2.47e-19;1!DOID:3451;2.37e-10;2!DOID:4159;2.37e-10;2!DOID:0060122;2.37e-10;2!DOID:154;2.37e-10;2!DOID:4236;2.37e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.08e-19,1;DOID:2513,1.30e-19,1;DOID:3451,1.72e-10,2;DOID:4159,1.72e-10,2;DOID:0060122,1.72e-10,2;DOID:154,2.49e-10,2;DOID:4236,2.49e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.32e-22!41;UBERON:0001890!1.32e-22!41;UBERON:0006240!1.32e-22!41;UBERON:0003080!6.86e-22!42;UBERON:0001049!3.40e-21!57;UBERON:0005068!3.40e-21!57;UBERON:0006241!3.40e-21!57;UBERON:0007135!3.40e-21!57;UBERON:0007023!5.23e-20!115;UBERON:0000955!1.29e-19!69;UBERON:0006238!1.29e-19!69;UBERON:0001893!1.68e-19!34;UBERON:0002616!1.37e-18!59;UBERON:0002791!1.98e-18!33;UBERON:0002020!6.19e-18!34;UBERON:0003528!6.19e-18!34;UBERON:0001869!5.21e-17!32;UBERON:0001017!2.99e-16!82;UBERON:0005743!3.16e-16!86;UBERON:0003075!1.50e-15!86;UBERON:0007284!1.50e-15!86;UBERON:0003056!2.56e-15!61;UBERON:0002346!1.99e-14!90;UBERON:0000073!8.97e-14!94;UBERON:0001016!8.97e-14!94;UBERON:0000956!5.88e-13!25;UBERON:0000203!5.88e-13!25;UBERON:0000033!1.56e-11!123;UBERON:0002619!2.35e-11!22;UBERON:0000153!3.26e-11!129;UBERON:0007811!3.26e-11!129;UBERON:0000025!5.73e-11!194;UBERON:0001950!8.65e-11!20;UBERON:0000477!2.16e-09!286;UBERON:0004111!5.67e-09!241;UBERON:0004121!4.55e-08!169;UBERON:0001871!1.16e-07!7;UBERON:0000924!1.20e-07!173;UBERON:0006601!1.20e-07!173;UBERON:0000064!9.80e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.47e-19;1!UBERON:0002038;2.47e-19;1!UBERON:0002146;2.47e-19;1!UBERON:0009661;2.47e-19;1!UBERON:0005623;2.47e-19;1!UBERON:0002950;2.47e-19;1!UBERON:0001891;2.47e-19;1!UBERON:0001905;2.37e-10;2!UBERON:0002757;2.37e-10;2!UBERON:0010134;2.37e-10;2!UBERON:0002081;2.37e-10;2!UBERON:0005408;2.37e-10;2!UBERON:0001899;2.37e-10;2!UBERON:0007846;2.55e-07;3!UBERON:0003978;2.55e-07;3!UBERON:0004151;2.55e-07;3!UBERON:0000946;2.55e-07;3!UBERON:0000043;2.55e-07;3!UBERON:0007845;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.56e-19,1;UBERON:0002146,2.25e-19,1;UBERON:0005623,2.25e-19,1;UBERON:0002038,5.62e-19,1;UBERON:0009661,5.62e-19,1;UBERON:0002950,5.62e-19,1;UBERON:0001891,5.62e-19,1;UBERON:0009616,5.62e-19,1;UBERON:0010286,5.62e-19,1;UBERON:0002081,1.89e-10,2;UBERON:0010227,1.89e-10,2;UBERON:0001905,3.27e-10,2;UBERON:0002757,3.27e-10,2;UBERON:0010134,3.27e-10,2;UBERON:0005408,3.27e-10,2;UBERON:0001899,3.27e-10,2;UBERON:0004151,2.19e-07,3;UBERON:0007846,2.32e-07,3;UBERON:0000043,2.32e-07,3;UBERON:0007845,2.32e-07,3;UBERON:0003978,2.47e-07,3;UBERON:0009751,2.47e-07,3;UBERON:0000946,2.47e-07,3;UBERON:0002523,2.47e-07,3;UBERON:0005983,2.47e-07,3;UBERON:0002165,2.47e-07,3;UBERON:0002062,2.47e-07,3;UBERON:0007280,2.47e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0.50133791063589,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0.179389635688862,0.640672166455702,0,0,0.206105058476878,0.515281080091258,1.30281799432113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,2.85486382075459,0.946214490203608,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.384417447767103,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0,0,1.55519793830904,0.179736702294654,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0.273810757783986,0,0,0,0.558564802544508,1.3749625440701,0,0.199679000498991,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0.169346664131569,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0.191915197319445,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0.340776043570843,0,0,0,0.387848869084652,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.3755727921195,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0.756154618816195,0.310874401165561,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.691292180758654,0,0,0,1.31043939538565,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.41023272848151,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,1.96526301012116,0,0.135075169236789,0,0.413373593002368,0.0634158101939068,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0,0.778619813244484,0,0.314231179832004,0,0,0,0,0.357382720883282,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,1.00337708206016,0,0.203974470572744,0.436350690340377,0,0.371995018166751,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.724030971033267,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:31855735..31855746,- | |||
}} |
Latest revision as of 09:28, 31 July 2015
Short description: | p@chr7:31855735..31855746, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:31855735..31855746, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.32e-07 | 3 |
tendon cell | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 1.56e-19 | 1 |
pulmonary valve | 2.25e-19 | 1 |
semi-lunar valve | 2.25e-19 | 1 |
substantia nigra | 5.62e-19 | 1 |
midbrain nucleus | 5.62e-19 | 1 |
regional part of midbrain | 5.62e-19 | 1 |
midbrain | 5.62e-19 | 1 |
presumptive midbrain | 5.62e-19 | 1 |
midbrain neural tube | 5.62e-19 | 1 |
cardiac atrium | 1.89e-10 | 2 |
future cardiac atrium | 1.89e-10 | 2 |
pineal body | 3.27e-10 | 2 |
regional part of epithalamus | 3.27e-10 | 2 |
secretory circumventricular organ | 3.27e-10 | 2 |
circumventricular organ | 3.27e-10 | 2 |
epithalamus | 3.27e-10 | 2 |
cardiac chamber | 2.19e-07 | 3 |
dense regular connective tissue | 2.32e-07 | 3 |
tendon | 2.32e-07 | 3 |
regular connective tissue | 2.32e-07 | 3 |
valve | 2.47e-07 | 3 |
cardiac mesenchyme | 2.47e-07 | 3 |
cardial valve | 2.47e-07 | 3 |
tunica intima | 2.47e-07 | 3 |
heart layer | 2.47e-07 | 3 |
endocardium | 2.47e-07 | 3 |
endocardial cushion | 2.47e-07 | 3 |
presumptive endocardium | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.08e-19 | 1 |
basal cell carcinoma | 1.30e-19 | 1 |
skin carcinoma | 1.72e-10 | 2 |
skin cancer | 1.72e-10 | 2 |
integumentary system cancer | 1.72e-10 | 2 |
mixed cell type cancer | 2.49e-10 | 2 |
carcinosarcoma | 2.49e-10 | 2 |