FFCP PHASE1:Hg19::chr7:7575477..7575491,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340267 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22442 | |||
|TSSclassifier=strong | |||
|UniProt=Q2UY09 | |||
|association_with_transcript=0bp_to_ENST00000399429_5end | |||
|cluster_id=chr7:7575477..7575491,- | |||
|coexpression_cluster_id=C4698 | |||
|description=CAGE_peak_2_at_COL28A1_5end | |||
|id=chr7:7575477..7575491,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.86e-17;3!UBERON:0003057;2.86e-17;3!UBERON:0005062;1.58e-13;4!UBERON:0007284;1.58e-13;4!UBERON:0006603;5.40e-08;65!UBERON:0009143;5.26e-07;1!UBERON:0010227;7.82e-07;1!UBERON:0004874;7.82e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.50e-42!115;UBERON:0003076!1.66e-12!15;UBERON:0003057!1.66e-12!15;UBERON:0003978!1.41e-09!3;UBERON:0009751!1.41e-09!3;UBERON:0000946!1.41e-09!3;UBERON:0002523!1.41e-09!3;UBERON:0005983!1.41e-09!3;UBERON:0002165!1.41e-09!3;UBERON:0002062!1.41e-09!3;UBERON:0007280!1.41e-09!3;UBERON:0002240!2.96e-09!3;UBERON:0005174!6.85e-09!5;UBERON:0001137!6.85e-09!5;UBERON:0001896!7.76e-09!3;UBERON:0005290!7.76e-09!3;UBERON:0010096!7.76e-09!3;UBERON:0003075!8.42e-09!86;UBERON:0007284!8.42e-09!86;UBERON:0006947!2.50e-08!3;UBERON:0004054!2.50e-08!3;UBERON:0002346!3.50e-08!90;UBERON:0002298!4.30e-08!8;UBERON:0003103!4.49e-08!69;UBERON:0000481!9.81e-08!347;UBERON:0001049!1.70e-07!57;UBERON:0005068!1.70e-07!57;UBERON:0006241!1.70e-07!57;UBERON:0007135!1.70e-07!57;UBERON:0000062!4.86e-07!511;UBERON:0002133!5.64e-07!2;UBERON:0004733!6.28e-07!12;UBERON:0002028!6.28e-07!12;UBERON:0007277!6.28e-07!12;UBERON:0002081!8.33e-07!2;UBERON:0003127!8.56e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;7.31e-18;3!UBERON:0000946;7.31e-18;3!UBERON:0002240;2.86e-17;3!UBERON:0005174;2.86e-17;3!UBERON:0001137;2.86e-17;3!UBERON:0002133;1.44e-12;2!UBERON:0002081;3.54e-12;2!UBERON:0003127;4.81e-12;2!UBERON:0000160;2.31e-10;17!UBERON:0001155;8.22e-10;9!UBERON:0007023;1.53e-08;114!UBERON:0004151;2.12e-08;3!UBERON:0001723;4.16e-08;3!UBERON:0001033;4.16e-08;3!UBERON:0000059;4.81e-08;11!UBERON:0005409;5.53e-08;22!UBERON:0006947;6.27e-08;3!UBERON:0004054;6.27e-08;3!UBERON:0002135;3.13e-07;1!UBERON:0000996;3.72e-07;1!UBERON:0002146;5.26e-07;1!UBERON:0002134;5.26e-07;1!UBERON:0005208;5.26e-07;1!UBERON:0005623;5.26e-07;1!UBERON:0004145;5.26e-07;1!UBERON:0005946;5.26e-07;1!UBERON:0005965;5.26e-07;1!UBERON:0002078;5.26e-07;1!UBERON:0002079;7.82e-07;1!UBERON:0000989;7.82e-07;1!UBERON:0008811;7.82e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.22e-31,114;UBERON:0003978,7.75e-18,3;UBERON:0009751,7.75e-18,3;UBERON:0000946,7.75e-18,3;UBERON:0002523,7.75e-18,3;UBERON:0005983,7.75e-18,3;UBERON:0002165,7.75e-18,3;UBERON:0002062,7.75e-18,3;UBERON:0007280,7.75e-18,3;UBERON:0002240,3.48e-17,3;UBERON:0005174,3.48e-17,3;UBERON:0001137,3.48e-17,3;UBERON:0002133,1.44e-12,2;UBERON:0002081,3.17e-12,2;UBERON:0010227,3.17e-12,2;UBERON:0003127,3.35e-12,2;UBERON:0003103,5.57e-11,68;UBERON:0000160,2.54e-10,17;UBERON:0001155,8.62e-10,9;UBERON:0004151,1.97e-08,3;UBERON:0001723,3.94e-08,3;UBERON:0001033,3.94e-08,3;UBERON:0010056,3.94e-08,3;UBERON:0000059,5.00e-08,11;UBERON:0004797,6.58e-08,7;UBERON:0006947,7.49e-08,3;UBERON:0004054,7.49e-08,3;UBERON:0002135,3.13e-07,1;UBERON:0000996,3.73e-07,1;UBERON:0002134,5.26e-07,1;UBERON:0005208,5.26e-07,1;UBERON:0005946,5.26e-07,1;UBERON:0005965,5.26e-07,1;UBERON:0002078,5.26e-07,1;UBERON:0002146,5.57e-07,1;UBERON:0005623,5.57e-07,1;UBERON:0005409,5.73e-07,25;UBERON:0000989,6.60e-07,1;UBERON:0008811,6.60e-07,1;UBERON:0006258,6.60e-07,1;UBERON:0005876,6.60e-07,1;UBERON:0004874,6.60e-07,1;UBERON:0002079,6.99e-07,1 | |||
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|short_description=p2@COL28A1 | |||
}} |
Latest revision as of 13:01, 19 September 2015
Short description: | p2@COL28A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COL28A1_5end |
Coexpression cluster: | C4698_spinal_heart_esophagus_trachea_duodenum_substantia_penis |
Association with transcript: | 0bp_to_ENST00000399429_5end |
EntrezGene: | COL28A1 |
HGNC: | 22442 |
UniProt: | Q2UY09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data