FFCP PHASE1:Hg19::chr7:94049917..94049930,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:94049917..94049930,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr7:94049917..94049930,+ | |||
|id=chr7:94049917..94049930,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.74e-39!180;CL:0000057!4.48e-29!75;CL:0000187!1.07e-14!54;CL:0000183!2.43e-14!59;CL:0000680!5.00e-14!57;CL:0000056!5.00e-14!57;CL:0000355!5.00e-14!57;CL:0000048!2.49e-13!430;CL:0000723!1.80e-12!436;CL:0000393!2.04e-12!60;CL:0000211!2.04e-12!60;CL:0000034!1.14e-11!444;CL:0000192!2.75e-11!42;CL:0000514!2.75e-11!42;CL:0002620!9.06e-11!23;CL:0002334!2.03e-09!12;CL:0000359!4.53e-08!32;CL:0002320!5.52e-07!365;CL:0002371!6.48e-07!591;CL:0002494!9.29e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.74e-10;12!CL:0000057;1.37e-09;73!CL:0002620;1.63e-09;23!CL:0000499;1.89e-09;28!CL:0002320;3.37e-08;188!CL:0000153;1.81e-07;9!CL:0000447;1.81e-07;9!CL:0000134;2.18e-07;55!CL:0000723;8.18e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.79e-25,76;CL:0000048,8.67e-16,427;CL:0000723,3.91e-15,433;CL:0000034,2.70e-14,441;CL:0002320,2.36e-11,361;CL:0000134,1.41e-10,354;CL:0002334,2.83e-10,12;CL:0002620,1.25e-09,23;CL:0000499,2.31e-09,28;CL:0000136,1.75e-08,15;CL:0000219,2.04e-08,386;CL:0000153,1.62e-07,9;CL:0000447,1.62e-07,9;CL:0000187,6.66e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.11e-07;5!DOID:450;2.11e-07;5!DOID:66;2.11e-07;5!DOID:423;2.11e-07;5!DOID:0080000;2.11e-07;5!DOID:11722;2.11e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.61e-07,5;DOID:450,1.61e-07,5;DOID:66,1.61e-07,5;DOID:423,1.61e-07,5;DOID:0080000,1.61e-07,5;DOID:11722,1.61e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.04e-16!83;UBERON:0002329!3.04e-16!83;UBERON:0003077!3.04e-16!83;UBERON:0003059!3.04e-16!83;UBERON:0007282!3.04e-16!83;UBERON:0009618!3.04e-16!83;UBERON:0007285!3.04e-16!83;UBERON:0004290!3.70e-15!70;UBERON:0002385!1.44e-14!63;UBERON:0001015!1.44e-14!63;UBERON:0000383!1.44e-14!63;UBERON:0001134!3.84e-14!61;UBERON:0002036!3.84e-14!61;UBERON:0003082!3.84e-14!61;UBERON:0000486!2.63e-12!82;UBERON:0005256!3.45e-09!143;UBERON:0002199!7.30e-09!45;UBERON:0002416!7.30e-09!45;UBERON:0003102!5.78e-08!95;UBERON:0002384!2.12e-07!375;UBERON:0002097!2.18e-07!40;UBERON:0004872!3.75e-07!84;UBERON:0001013!4.47e-07!14;UBERON:0003688!5.54e-07!6;UBERON:0002358!5.54e-07!6;UBERON:0003684!5.54e-07!6;UBERON:0001178!5.54e-07!6;UBERON:0000475!6.64e-07!365;UBERON:0000948!7.02e-07!24;UBERON:0005498!7.02e-07!24;UBERON:0004140!7.02e-07!24;UBERON:0009881!7.02e-07!24;UBERON:0004141!7.02e-07!24;UBERON:0003084!7.02e-07!24;UBERON:0007005!7.02e-07!24;UBERON:0004139!7.02e-07!24;UBERON:0004291!7.02e-07!24;UBERON:0002100!7.39e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.16e-11;9!UBERON:0000042;7.16e-11;9!UBERON:0003688;5.10e-10;6!UBERON:0002358;5.10e-10;6!UBERON:0003684;5.10e-10;6!UBERON:0001178;5.10e-10;6!UBERON:0002384;2.44e-08;198!UBERON:0001013;8.75e-08;14!UBERON:0002199;1.35e-07;46!UBERON:0002416;1.35e-07;46!UBERON:0002097;2.47e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.48e-11,46;UBERON:0002416,1.48e-11,46;UBERON:0002384,2.36e-11,371;UBERON:0003688,5.54e-10,6;UBERON:0002358,5.54e-10,6;UBERON:0003684,5.54e-10,6;UBERON:0001178,5.54e-10,6;UBERON:0002097,3.34e-09,41;UBERON:0003102,9.03e-09,99;UBERON:0001013,5.32e-08,14;UBERON:0004457,1.15e-07,12;UBERON:0000042,1.15e-07,12;UBERON:0007524,4.75e-07,73;UBERON:0001134,7.12e-07,62;UBERON:0002036,7.12e-07,62;UBERON:0003082,7.12e-07,62 | |||
|phase1_expression=4.1786027232228,3.42560838225573,4.22863212287913,7.00513088471913,9.83314407740033,2.61701557230111,2.53299878168311,1.89515962028049,0,0,0,0.218441372130172,0.791300934685361,0.618831764800233,0.994192127183747,1.34465029290355,0.602694528023977,2.19093027116212,0,0.492484232307152,1.02000345622126,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0.767175371061182,4.3372698286148,3.00802746381534,7.38717246700201,1.5905718941022,2.43317435151318,0.0945348171640679,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.77282716330412,1.19168262731897,12.0471380714502,1.06400514659507,1.12135520028461,1.06748995729705,1.72667283892012,0.311211035399766,1.88594940897563,0.326923806226917,3.93529311876822,4.60940739583999,0,0,0,0.298897361103602,0.23486899728753,0.647491777472526,0.842704840213491,0.204154171254893,0.491337269247072,0.413303124703062,5.94001428641027,4.69807165629258,0.910161361938026,0.718618141816238,0.336672227908132,0.250237039743928,0,0.438977620880838,2.45190236639216,3.00476117813194,1.13432183160021,3.94657198515496,1.70845911054854,3.39091041855299,6.90209520994125,2.16410311400722,5.66809188100384,2.60563598864226,4.21940830603166,3.02054715999716,4.54380793639406,2.20919756741518,3.71785930683267,6.03516307278244,1.81353776809752,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,3.85944562915731,0,1.85747171212792,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,5.88034845542168,0,0,0,0,0,0.171567810298526,0,0,0,0,0,1.03993478527958,0,0.115930404975077,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.2933531432838,1.03417372606222,3.57656445851882,0.845302752556,2.12750493267896,1.04007436911366,0,1.41849132023278,0.266422179016099,1.85871391755592,0.542621605391443,0,0,1.42156779497018,0.791951872933429,0.301439377059586,0,0,0,0,0,1.67737398844108,1.14861935834114,0,0,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0.542530047399471,4.15941723061614,5.88815663030634,4.57337003598411,2.45996971484698,1.80567659836631,2.27407504055985,1.03473071292505,0,0.737476674166813,1.30325421702124,2.15381273209015,3.0882908142977,0,0,0,0.303127571446259,0,1.20956117331872,3.2254015016441,2.455391572609,8.41980283299221,6.27881831352935,3.07024349440022,4.82561763430822,1.48418066444991,1.07946785661859,1.9531789784444,0.739144404124282,2.07701771673448,0.697262270759755,0,0,0,1.03333003348146,1.63882051206045,2.36023946926963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.96670718292122,0.616194468458578,1.5350367472613,0.827019434907183,1.07420244868274,1.30515024522806,0.255679882248303,3.29418531892928,0,0,0,0,1.85938219718914,13.5369309137175,0,1.84820148105653,0.532306030317022,0,0.9266210955196,0.715624433709956,0,0,1.71567174531442,0.511795582622668,0.855877976067841,0,1.56989728039846,1.43897966066652,1.64722217841633,1.17812402345686,0,4.75530963519025,0.842516912477962,0,0.731140468893853,0,0.818999468447914,1.69686518344455,2.26016233240486,1.10273068709225,1.32687795048244,0.876901770507525,0.578775534266688,3.27947376023316,0.608731130888112,1.239293992399,1.40847801266121,0.717056761020258,0.589494246078727,2.1400263088875,0.354761064070598,2.9555068941673,5.59801318031833,0.379473173765715,1.39973888097993,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,2.17727711363265,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,1.37396390102793,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,4.01288823649394,0,0,0,0,0.394584402849391,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.51595809741485,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.209205692624666,0.203996435272644,0,0,0,0,0.429765441419957,0,1.39641200636127,0.229160424011684,0,0,0,0.223171457441873,0.201550417460179,2.16179930125442,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0.5085370753095,3.25799761052228,3.45688596480507,1.95952416065645,0,0,1.70388021785422,0,0.146552233678082,0,0,0,0,0,0,0.943225830597996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34329322598187,3.27198633786114,1.66441758450784,1.7046270474758,2.51567901752575,0,0.915360273587694,3.02461847526478,2.17612080815893,0.147855149989634,0.63718706865481,0.449803112163605,1.08684069813382,0,1.59505028734797,0.521745061811734,1.95334891696384,1.90402606084398,0.81374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| |||
|short_description=p@chr7:94049917..94049930,+ | |||
}} |
Latest revision as of 12:44, 31 July 2015
Short description: | p@chr7:94049917..94049930, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:94049917..94049930, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.79e-25 | 76 |
multi fate stem cell | 8.67e-16 | 427 |
somatic stem cell | 3.91e-15 | 433 |
stem cell | 2.70e-14 | 441 |
connective tissue cell | 2.36e-11 | 361 |
mesenchymal cell | 1.41e-10 | 354 |
preadipocyte | 2.83e-10 | 12 |
skin fibroblast | 1.25e-09 | 23 |
stromal cell | 2.31e-09 | 28 |
fat cell | 1.75e-08 | 15 |
motile cell | 2.04e-08 | 386 |
GAG secreting cell | 1.62e-07 | 9 |
carbohydrate secreting cell | 1.62e-07 | 9 |
muscle cell | 6.66e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
integument | 1.48e-11 | 46 |
integumental system | 1.48e-11 | 46 |
connective tissue | 2.36e-11 | 371 |
omentum | 5.54e-10 | 6 |
peritoneum | 5.54e-10 | 6 |
abdominal cavity | 5.54e-10 | 6 |
visceral peritoneum | 5.54e-10 | 6 |
skin of body | 3.34e-09 | 41 |
surface structure | 9.03e-09 | 99 |
adipose tissue | 5.32e-08 | 14 |
cavity lining | 1.15e-07 | 12 |
serous membrane | 1.15e-07 | 12 |
dense mesenchyme tissue | 4.75e-07 | 73 |
skeletal muscle tissue | 7.12e-07 | 62 |
striated muscle tissue | 7.12e-07 | 62 |
myotome | 7.12e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.61e-07 | 5 |
myotonic disease | 1.61e-07 | 5 |
muscle tissue disease | 1.61e-07 | 5 |
myopathy | 1.61e-07 | 5 |
muscular disease | 1.61e-07 | 5 |
myotonic dystrophy | 1.61e-07 | 5 |