FFCP PHASE1:Hg19::chr8:116681409..116681431,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12340 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UHF7 | |||
|association_with_transcript=-181bp_to_ENST00000395715,NM_014112,uc003yny.2,uc003ynz.2,uc010mcy.2_5end | |||
|cluster_id=chr8:116681409..116681431,- | |||
|description=CAGE_peak_2_at_TRPS1_5end | |||
|id=chr8:116681409..116681431,- | |||
|ontology_enrichment_celltype=CL:0002057!5.03e-14!42;CL:0000860!3.21e-11!45;CL:0002009!1.60e-09!65;CL:0002194!7.92e-09!63;CL:0000576!7.92e-09!63;CL:0000040!7.92e-09!63;CL:0000559!7.92e-09!63;CL:0000557!4.14e-08!71;CL:0000766!5.76e-07!76;CL:0000839!9.12e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.89e-17;33!CL:0002057;2.89e-17;33!CL:0000473;1.27e-12;39!CL:0000234;1.27e-12;39!CL:0000576;2.11e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.33e-14,42;CL:0002057,4.33e-14,42;CL:0000473,2.80e-12,48;CL:0000234,2.80e-12,48;CL:0002009,1.74e-11,61;CL:0002194,1.06e-10,59;CL:0000576,1.06e-10,59;CL:0000040,1.06e-10,59;CL:0000559,1.06e-10,59;CL:0000557,6.76e-10,67;CL:0000766,1.02e-08,72;CL:0000839,1.97e-08,66 | |||
|ontology_enrichment_development_v019=CL:0002057;4.99e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!5.41e-12!511;UBERON:0004765!1.81e-10!101;UBERON:0001434!1.81e-10!101;UBERON:0002204!2.18e-10!167;UBERON:0000468!3.11e-10!659;UBERON:0000922!6.52e-09!612;UBERON:0002050!8.93e-09!605;UBERON:0005423!8.93e-09!605;UBERON:0000923!1.69e-08!604;UBERON:0005291!1.69e-08!604;UBERON:0006598!1.69e-08!604;UBERON:0002532!1.69e-08!604;UBERON:0001474!2.64e-08!86;UBERON:0000467!3.19e-08!625;UBERON:0000480!4.82e-08!626;UBERON:0002371!6.25e-08!80;UBERON:0001049!5.59e-07!57;UBERON:0005068!5.59e-07!57;UBERON:0006241!5.59e-07!57;UBERON:0007135!5.59e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,1.73e-13,100;UBERON:0002204,1.58e-11,167;UBERON:0004765,2.13e-11,90;UBERON:0001474,4.89e-10,82;UBERON:0002371,1.11e-09,76;UBERON:0001049,6.45e-07,56;UBERON:0005068,6.45e-07,56;UBERON:0006241,6.45e-07,56;UBERON:0007135,6.45e-07,56;UBERON:0010314,6.64e-07,132;UBERON:0002050,9.60e-07,564 | |||
|phase1_expression=0.181678379270557,1.49870366723688,1.83240725324762,1.0007329835313,1.34088328328186,0,2.53299878168311,0.631719873426831,0.522371256399677,0.245733936501509,0,1.52908960491121,1.05506791291381,4.95065411840187,5.30235801164665,3.36162573225888,0.602694528023977,1.46062018077475,0.975865597581014,1.84681587115182,1.63200552995402,2.19418305034661,3.72106783270374,5.2012281527696,1.75759695432724,0,0,0,1.96682138424452,2.30297638858328,3.71558695958582,1.83884244895785,0.6024118375565,1.47901604066715,0.387336002901508,0.284338464974843,1.76160263600908,3.32397245119126,2.20598892217156,3.90619567288533,3.35873211359887,3.56283032620878,2.57575567634187,10.9048679084674,10.9584023669755,14.3124596100812,13.0160260667183,12.7462045286766,13.3173739484895,35.0984718633024,21.2613386419154,29.7967609659617,21.0294865249337,18.0735711403471,12.1883837934908,11.1062980330137,12.8265890527188,8.7642158933583,14.0798590490615,25.0324641119353,15.983428144976,11.5447955065351,13.1646014030277,16.6227652707751,7.83564944297177,6.24123747160254,9.34233373493363,25.1248665256743,25.5526630025899,31.709571326947,9.08099253950053,12.1531619875896,6.96217252369946,1.69004229049553,1.27562579979026,0.838634582033504,2.47122988522289,3.00353785683013,3.37523732063868,0.570025487482497,0.39783335439818,1.0959849225878,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,2.27685187643779,1.17447437874188,0,1.32171328579026,4.48406850385229,2.10707267820062,0.590129310341499,0.393010762749165,0.616804496998528,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0,0.541607727530031,0.384273959177026,0.650296737799391,0,0,0.289803085735052,0.593146252648242,0.267540828089713,0,0,0.766440987203842,0,0.253019692019503,0.318565414324097,0,0.950452044448374,0.301150238155546,0.255973222308837,1.24930726552346,0.236777252044017,0.821127996921047,0.403213486449465,0.802320587350522,0.434473211648397,12.1903433156981,2.01210257911091,2.55725123687061,9.03597880961416,10.0267582127178,12.6016471495917,33.4020097761462,79.3214838593296,2.26883561193763,1.10864698731282,2.28370442802128,2.94702919869853,0,0.741568885568859,0.649094787309367,0.348259474598534,1.06366368415092,0.476981248610684,0,0.74291500265913,0.198762407366705,1.72046919021225,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0.732186172644509,0,0,0.357198913136319,0,0.337834441449967,0,0.949265659568129,0.366403487860815,2.63560834872127,0,0,3.47880366186723,0.759783069987479,1.58891016975863,7.17091551872034,3.19201543978521,3.36406560085384,5.33744978648525,3.7000132262574,18.0502400531864,2.96363478553314,3.92308567472301,2.27036141467397,4.03323147135999,0.234321431833797,2.49728061464256,1.1409436430889,1.34503812496621,5.28455243896942,3.56120477609889,4.49442581447195,4.89970011011744,5.65037859634133,7.43945624465511,4.75201142912821,4.69807165629258,0,0,5.21841953257605,6.50616303334214,3.04770527032601,2.19488810440419,1.5324389789951,5.55880817954408,0.340296549480063,5.38168907066586,10.2507546632912,3.81477422087211,2.10063767259082,3.19462840639161,4.3798891807757,2.60563598864226,3.88185564154912,3.21542117031955,8.33031455005578,8.83679026966074,0.969876340912871,7.10019185033229,3.42557133973977,0.847802961552438,2.31913023795956,2.45471508531751,4.30206893083506,1.09776335516636,1.19276791489337,0.929551542956147,1.96956004529204,0.756962552626885,2.18986415445498,6.25798129319264,10.935095949279,2.76269842704961,5.10804720835177,0.721879481669586,0.354920400119532,0.505754070234305,0.482022059766964,0.441175890929576,0.435758888184812,0.474541238222193,0.269662616320329,0.784885860501384,0.769494313892781,0,1.40241773803446,1.6462960453256,0,0,1.96565443335525,0,0,0,1.88724591328378,3.95101027471052,2.24803506515239,0.100528972411631,0.462942225792648,0,1.03993478527958,0,1.04337364477569,3.40485213283883,0,0,0,20.5453143469412,22.3206402144667,2.21595305478658,1.40402559083543,3.26988557035202,2.81201501960331,1.17587489739202,1.55952606966625,1.07470227243418,1.45316969256981,1.91691339582606,0,0.088048434013226,1.86595303986695,1.44119953416961,1.8936365013957,0.063497894292169,0.381988425558278,0,0,0.308482478109971,0,0.285826432630578,1.56983518083505,0,1.24675085895615,2.71470603091333,0,1.690605505112,1.59562869950922,0,2.05765899409714,0,3.19706614819319,2.28764789853036,0.542621605391443,0,1.62868092146868,2.48774364119782,0.791951872933429,1.50719688529793,0,1.79951384127703,0,3.01354254859276,0,4.31324739884849,5.7430967917057,7.13184525203592,1.15825045334063,4.9314317412092,2.68591444859843,0,0.394061520403854,0.431255149719035,0.513372145118994,10.9260688415659,5.20559415430487,1.54657762555539,1.17261385734044,1.27587750330633,1.49801404789436,0,4.14415513436035,10.0607023209695,7.00238729483548,7.32415563989286,4.78332981520856,5.88815663030634,6.78120384645919,5.97421216462837,3.00946099727719,4.5481500811197,5.17365356462525,4.64957918974806,5.16233671916769,1.91143951829782,0.195801157462741,1.02943027143257,1.44737618286021,2.80428461064202,0.533637789017222,0,0,0.604780586659361,1.24053903909388,2.60885354589706,1.40330047216537,3.58789617915963,1.53512174720011,6.4341568457443,1.48418066444991,3.23840356985577,2.48586415438378,4.68124789278712,4.67328986265259,2.32420756919918,0.966875596732978,4.41114234667227,4.05156351317944,1.03333003348146,0.546273504020151,1.18011973463482,0,0.770153371044148,0.784349769176855,0,1.05551628892876,0,0,2.15915916102139,0,0.541892875087706,1.00337954770971,1.78413391131527,0,0.895499018888713,0.219259876645935,0,1.02580050046556,0.328014645699706,0.650756789328606,1.13345112812495,34.7963966309705,36.2216704651381,1.14853107599234,2.60024098414608,1.6068392984416,9.76374254750432,6.932187770159,5.52613229014066,3.44591431211326,7.62683738564743,9.42608510442485,7.75562309486518,7.12256285173899,1.65284915360978,1.53752053892085,2.67986696238627,2.4277867405332,2.32422774648643,3.46293581513704,0.6970372701606,2.46426864140871,1.59691809095107,1.73986598415015,1.48259375283136,1.86062352764589,2.97726695487734,1.89827654831236,2.09693213316207,0.767693373934002,5.13526785640705,3.81843897511124,0.78494864019923,1.61885211824983,3.0199073270966,3.18093486333353,1.01091240786658,3.17020642346017,3.79132610615083,1.46290121726877,1.46228093778771,0,2.04749867111979,0.989838023675989,2.26016233240486,0.551365343546124,0.66343897524122,1.75380354101505,1.15755106853338,8.52663177660623,0.811641507850816,0.6196469961995,0.281695602532241,0.717056761020258,0,0.35667105148125,2.48332744849418,9.28873595309722,4.61012850143863,0.75894634753143,1.74967360122491,0.288666338176536,1.34060455107157,0,0.847294206991012,1.29151611801369,1.68471475667626,0.443430153536676,0,0,0.764637207142375,0,0.238231775457789,0,1.94541993357815,1.08006287447623,0,8.22545347681543,0,2.45040215981032,2.9728508020115,0,2.70339004723974,0,40.9137711437274,5.745161103971,1.90506224451495,0,1.12318871245384,4.56469358066384,0,0,13.8819257797315,0,0,0,0.343505344755765,7.37377834340299,5.14455048152557,5.50602167649298,0,2.22724939116194,0,0.811367035427949,2.99764771198038,0,0.37428108081644,1.75809815126273,7.40299182672032,0,0.284136146806413,2.62618933211459,1.18785872333055,1.53580351049616,4.97073823883149,8.44016498463076,3.56187856073299,16.480387422676,17.9456596908794,5.97743964753209,0.552567831062295,5.2905877049398,0.818149460017238,0.492339221844278,3.42143546427988,0.539210106883961,3.9384658428634,0,1.97286811273867,2.3948309234694,0,2.90799823828566,2.50473865036998,0,51.304268933791,175.88205999235,28.2749834419569,1.82069517256799,9.66163871112512,11.8193840883968,0,3.2076507472158,21.0086243869284,5.31444831488303,7.23578631752448,0,5.08664595683633,0.591095237907095,2.85201016300164,0.871507708151921,2.50962739701486,11.2347377415544,1.82307289355202,0,0.0897576444097721,0.108647371922008,0.638002319463839,1.92354946143911,1.06606955203727,0,35.7914984580656,0,1.57916962432026,0.980312671588698,1.84603745673427,1.51802986179348,0.317873157960757,0.632994193584081,0,0,3.67860687561555,1.99052386215701,1.14994833854341,1.22206028986725,0.889563386041866,0.123563938946503,0.104421949505455,3.57226004797588,4.01288823649394,3.98249557733077,0.182454789215666,5.86993856796269,0,4.3404284313433,3.62972148145992,1.83643656978294,4.54943373325113,9.47037542311303,3.83646308169814,1.99396161812156,1.65495977937749,4.70899377610838,5.97362148864794,23.0533732284132,22.1879476821022,5.90103110339445,1.17590876897253,0.174118413160805,3.14508002835654,6.53546923392143,0,0,0,9.79589066533036,0.0882561266915003,2.71176888936639,2.05562886970126,0.993573058514948,2.21587785845575,0,1.76349404553374,4.90941887900511,0.999048047910651,1.00863292007874,18.5549285788783,10.8104848653038,0.14405479798815,3.10631338913581,4.47818665771911,0.135904206073614,0,0.203996435272644,1.15580235960608,7.80546375322726,3.83335060897581,1.27746588066972,3.43812353135966,0,6.42349522926185,1.14580212005842,5.74298419661451,1.39775300349294,0.429226048136571,2.90122894674434,1.61240333968143,1.44119953416961,0,0,0,0,0,0,2.38568906942791,9.94284864614502,3.05430982083536,4.67634084430595,3.73896304226267,7.64911231275102,8.51182150013745,2.91597871958518,0,8.27459926641581,7.55346069143973,3.16801009558219,0.537862017998534,3.64638874906946,2.85878130549347,0.662091970365432,0,1.62899880526114,0.864221491201268,6.85833456229759,4.7892076624995,1.06720276974141,3.74853647927928,2.60617810496289,1.02586563574658,1.32506888912221,4.26633755993117,5.95046707842105,0,2.11444506695002,1.38823636338003,1.10043013569766,0.828478110694391,1.48849806543585,0.197611631897944,0.730755590285376,3.19170628885091,2.72008901684737,3.5096585163178,2.45076461410769,5.57383472206668,23.2440062450347,2.65820453990096,2.80660409274515,4.00610978260799,6.88091034828085,9.98361463831671,5.40238705590036,6.22568857213039,8.37368733346114,0.758245587708239,0.285465333544967,0.470531639396343,0,3.76794674388145,2.23882204330311,1.63599316893057,0.554805861502613,10.4171652901299,7.79860495432983,12.4573571023515,2.28840068396924,3.78077309408098,7.30554842739068,2.95710299979268,1.27437413730962,13.0442902527445,7.45262193006045,3.31764966272684,1.86089200190596,2.08698024724694,2.85489457094715,2.28483127301277,1.62748293281865,5.63730843527934,4.51124339578452,5.56840511854192,2.3885753321917,1.20008329398946,2.74716564146234,3.70424437642511,1.26184898228651,0,0,0,0,0.463044948647668,0.97894681802587,0.537266523244462,4.32322026025361,0.657852148736121,1.23682402162117,0,0.168942440653073,0,0,1.51929978088691,5.80685431837269,1.55888247071511,3.05589132720735,1.4720885483026,0.982829546539238,0.737318726261158,0.422624246717254,0.79994958341972,2.8806767017418,0.688859918643263,1.13503190713367,2.76158925377761,0.699397538597222,0.622077260032973,7.9294510208264,4.744291701454,0.629063767423586,0,0.169732529954025,0.425149840203366,0.371807292777007,6.14509409770568,0.954013051960256,0,0,0.352675943690684,0,2.89031512934068,2.8339315265117,4.15048033548593,2.2562800066483,1.26035848110859,1.59061680667701,3.39098855826887,0,3.23887471053385,1.65157612686837,0.183428598521679,0.462102664601353,2.288292572803,1.3807198521202,76.3838292926495,3.38446477571658,2.21875575573872,0,0,0.655087670040387,0.147856086217045,1.48582686160468,1.56215619722769,5.1671699125296,2.15613754659283,0,0.548257766857182,3.47347824872506,4.39678110899052,1.14986184875636,2.67850917939143,0.336283722218824,6.67662164660295,5.46389259243114,0.177404740325278,0.921871900446234,19.0351690475535,2.17503145525861,2.23627430113687,0.118193840883968,15.1274706573214,9.34067804921117,5.18481446722806,1.68163297988273,3.65263488203798,0.431855182437243,0,1.50100742770978,0,0,18.0812603194683,0.801711364730253,2.27937780579341,2.7314956335032,9.67763526539729,1.72090943528111,1.06498800657509,1.02256085710989,4.23387050190929,2.52017555398455,7.44495325594368,10.5109283287518,0,2.55190607399632,0.487671699929078,0.647428837187895,0.615976841137482,1.1598144313382,18.4570177362473,0,24.4709453448483,8.80008671754007,41.5641581903373,0.769583617218004,1.35866559210006,0.848915739187391,1.09279780251979,0,2.69663153929296,4.94920748913415,4.71140321075869,6.83206720752298,3.8039015482506,3.73839652313197,0.845855261818682,0.644578879735772,0,3.39252483350749,0.352894871715692,0.0802413666891683,2.19100916473955,2.2936464170227,3.01013124618048,16.250470905898,2.85564258801842,3.05445483238264,2.1161073620616,12.6478306176695,18.4870251452567,1.29787968637137,0.883164973845552,1.85751472338282,5.06794004045748,5.30341914658305,0.801652215796681,0.643264296743914,0.250707539292375,1.43979526614655,1.60778478093707,5.80418607621146,4.55105181792339,5.33084954752452,6.18967521805725,0.904244737704086,1.24149428591716,0.897054900644907,2.80047496423926,2.22328907854041,16.981906335963,10.951465634729,5.25346013513783,5.30744319905805,8.64916927019635,3.33753401304995,4.58927587274176,3.8614456457388,10.9586746570036,2.34640942403454,4.88965776731466,10.1724044578935,1.33151354837103,1.20764276154616,0 | |||
|short_description=p2@TRPS1 | |||
}} |
Latest revision as of 06:45, 25 September 2015
Short description: | p2@TRPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRPS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -181bp_to_ENST00000395715, NM_014112, uc003yny.2, uc003ynz.2, uc010mcy.2_5end |
EntrezGene: | TRPS1 |
HGNC: | 12340 |
UniProt: | Q9UHF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.33e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.33e-14 | 42 |
defensive cell | 2.80e-12 | 48 |
phagocyte | 2.80e-12 | 48 |
macrophage dendritic cell progenitor | 1.74e-11 | 61 |
monopoietic cell | 1.06e-10 | 59 |
monocyte | 1.06e-10 | 59 |
monoblast | 1.06e-10 | 59 |
promonocyte | 1.06e-10 | 59 |
granulocyte monocyte progenitor cell | 6.76e-10 | 67 |
myeloid leukocyte | 1.02e-08 | 72 |
myeloid lineage restricted progenitor cell | 1.97e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 1.73e-13 | 100 |
musculoskeletal system | 1.58e-11 | 167 |
skeletal element | 2.13e-11 | 90 |
bone element | 4.89e-10 | 82 |
bone marrow | 1.11e-09 | 76 |
neural tube | 6.45e-07 | 56 |
neural rod | 6.45e-07 | 56 |
future spinal cord | 6.45e-07 | 56 |
neural keel | 6.45e-07 | 56 |
structure with developmental contribution from neural crest | 6.64e-07 | 132 |
embryonic structure | 9.60e-07 | 564 |