FFCP PHASE1:Mm9::chr4:115726172..115726197,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=441|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:115726172..115726197,+|id=chr4:115726172..115726197,+|ontology_enrichment_celltype=CL:0000066!3.06e-08!25;CL:0002563!3.83e-07!9;CL:0002251!3.83e-07!9;CL:0000791!8.70e-07!9;CL:0000789!8.70e-07!9;CL:0002420!8.70e-07!9;CL:0002419!8.70e-07!9;CL:0000790!8.70e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,5.85e-14,25;CL:0002563,8.83e-11,9;CL:0002251,8.83e-11,9;CL:0000791,3.39e-10,9;CL:0000789,3.39e-10,9;CL:0002420,3.39e-10,9;CL:0002419,3.39e-10,9;CL:0000790,3.39e-10,9;CL:0000223,8.19e-10,20;CL:0000624,2.91e-09,8;CL:0000838,1.32e-08,12;CL:0000075,2.08e-08,7;CL:0002076,6.20e-08,15;CL:0000239,6.93e-08,6;CL:0000677,6.93e-08,6;CL:0000584,6.93e-08,6;CL:0000084,8.12e-08,11;CL:0000827,8.12e-08,11;CL:0000542,1.06e-07,13;CL:0000051,1.06e-07,13;CL:0000893,3.12e-07,6;CL:0002489,3.12e-07,6;CL:0000898,3.12e-07,6;CL:0000809,3.12e-07,6;CL:0000810,3.12e-07,6;CL:0000895,3.12e-07,6;CL:0000808,3.12e-07,6;CL:0000894,3.12e-07,6;CL:0000806,3.12e-07,6;CL:0000807,3.12e-07,6;CL:0000805,3.12e-07,6;CL:0002425,3.12e-07,6;CL:0002436,3.12e-07,6;CL:0002427,3.12e-07,6;CL:0002428,3.12e-07,6;CL:0002429,3.12e-07,6;CL:0002433,3.12e-07,6;CL:0002431,3.12e-07,6;CL:0002432,3.12e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005911!2.36e-08!69;UBERON:0001007!3.54e-08!128;UBERON:0001555!3.54e-08!128;UBERON:0007026!3.54e-08!128;UBERON:0000490!4.19e-08!66;UBERON:0000485!5.59e-08!11;UBERON:0004119!5.71e-08!130;UBERON:0000925!5.71e-08!130;UBERON:0006595!5.71e-08!130;UBERON:0004921!1.24e-07!126;UBERON:0004185!1.24e-07!126;UBERON:0003929!2.69e-07!55;UBERON:0003350!3.83e-07!9;UBERON:0004808!3.83e-07!9;UBERON:0001277!3.83e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000485,3.73e-12,11;UBERON:0000490,5.40e-11,66;UBERON:0003350,8.83e-11,9;UBERON:0004808,8.83e-11,9;UBERON:0001277,8.83e-11,9;UBERON:0005911,5.34e-10,69;UBERON:0000344,9.69e-09,15;UBERON:0003929,1.04e-08,55;UBERON:0004119,1.54e-08,118;UBERON:0000925,1.54e-08,118;UBERON:0006595,1.54e-08,118;UBERON:0001007,1.84e-08,116;UBERON:0001555,1.84e-08,116;UBERON:0007026,1.84e-08,116;UBERON:0004921,9.95e-08,114;UBERON:0001242,1.14e-07,13;UBERON:0001262,1.14e-07,13;UBERON:0004786,1.14e-07,13|phase1_expression=3.20297694209588,19.8915982354436,11.3749809847384,14.8207463540347,20.5367249278002,6.88305014838748,4.20502753071946,7.10178278928669,17.5985902689583,16.6185813688615,4.28044920563762,2.55270908785077,3.42401459862411,4.28359971853087,0.333109761815663,0.202475267389826,0,1.10411757875383,1.37114433605739,1.27316895539409,2.72138528483423,0.198581902401771,0,2.07990149631429,1.14704640533585,6.89078356938024,5.59990595006797,4.52489588640367,0.380046838912748,0.756090389279792,1.10865255327652,1.90509202037889,0.61506478758457,0,10.6875099307972,2.49351968037739,10.4126371693808,2.92972141515835,5.4693474116666,1.57057123192139,9.99993529652724,6.14740936462601,4.85510353031154,1.00717454380462,0.202753862439029,0.367093504323363,1.56478268869608,0.218025156380447,0.878744730937887,0.194429899074283,0.279972843250725,1.43752564364972,2.68452169692378,6.5282592781021,4.36921938885203,0.257259436035947,0,1.54701627683233,0.202316460859598,0,0.633831403506179,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0.768436610643109,0.207379224616955,0.405017814995072,0.420649922702764,0.285650984403804,0,0.122490799214954,0.287536413054709,0,1.10115880999389,0.255374676170375,0.153606533256243,0.659431438650969,0.274462930807229,0,0,0,0.45839474333043,0.294628585473668,0,0.745597783301202,0.37863096666592,0.604572480854284,25.7979394944493,0.860423876981386,2.03991400112325,1.07940638327563,1.94932925234301,0.896053774194671,0.561777680527007,0.340860645156116,0.519572009205738,0.35333957451034,1.54927761754349,0,0,0,0.432982082022428,1.77351905832569,3.0331466700887,1.48439043634778,1.8125651855302,1.03909497345377,0.693941307064543,0.608930956624282,0.230615497256059,0.452167921657868,0.823120949949934,0.628332956648377,0.988779870937496,0.86759614151947,0,0,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,0,1.43778149407104,0.599902730993408,1.01656181658452,0.449371918214468,0,0.376963056338593,0.695297280769106,0.255715457330331,0.41557608911912,0.811206315338788,0.407357455401265,0.373220911830279,0.505445516867349,2.31486041475121,0.260240885925407,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0.187403449119458,1.29351685369508,0.431135985865684,0,0.527853372491847,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0.284163499395593,0.414251545071004,0,0.180062061461015,0,0.393528463494808,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.405344047729279,0.730999937126662,0,0.402619256281115,0,0.308713837137853,0.330418782983798,2.11560453330835,0.639864751605702,0.696710015581316,0.6443373066104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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=441 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:115726172..115726197,+ | |||
|description=CAGE_peak_at_chr4:115726172..115726197,+ | |||
|id=chr4:115726172..115726197,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.06e-08!25;CL:0002563!3.83e-07!9;CL:0002251!3.83e-07!9;CL:0000791!8.70e-07!9;CL:0000789!8.70e-07!9;CL:0002420!8.70e-07!9;CL:0002419!8.70e-07!9;CL:0000790!8.70e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.85e-14,25;CL:0002563,8.83e-11,9;CL:0002251,8.83e-11,9;CL:0000791,3.39e-10,9;CL:0000789,3.39e-10,9;CL:0002420,3.39e-10,9;CL:0002419,3.39e-10,9;CL:0000790,3.39e-10,9;CL:0000223,8.19e-10,20;CL:0000624,2.91e-09,8;CL:0000838,1.32e-08,12;CL:0000075,2.08e-08,7;CL:0002076,6.20e-08,15;CL:0000239,6.93e-08,6;CL:0000677,6.93e-08,6;CL:0000584,6.93e-08,6;CL:0000084,8.12e-08,11;CL:0000827,8.12e-08,11;CL:0000542,1.06e-07,13;CL:0000051,1.06e-07,13;CL:0000893,3.12e-07,6;CL:0002489,3.12e-07,6;CL:0000898,3.12e-07,6;CL:0000809,3.12e-07,6;CL:0000810,3.12e-07,6;CL:0000895,3.12e-07,6;CL:0000808,3.12e-07,6;CL:0000894,3.12e-07,6;CL:0000806,3.12e-07,6;CL:0000807,3.12e-07,6;CL:0000805,3.12e-07,6;CL:0002425,3.12e-07,6;CL:0002436,3.12e-07,6;CL:0002427,3.12e-07,6;CL:0002428,3.12e-07,6;CL:0002429,3.12e-07,6;CL:0002433,3.12e-07,6;CL:0002431,3.12e-07,6;CL:0002432,3.12e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!2.36e-08!69;UBERON:0001007!3.54e-08!128;UBERON:0001555!3.54e-08!128;UBERON:0007026!3.54e-08!128;UBERON:0000490!4.19e-08!66;UBERON:0000485!5.59e-08!11;UBERON:0004119!5.71e-08!130;UBERON:0000925!5.71e-08!130;UBERON:0006595!5.71e-08!130;UBERON:0004921!1.24e-07!126;UBERON:0004185!1.24e-07!126;UBERON:0003929!2.69e-07!55;UBERON:0003350!3.83e-07!9;UBERON:0004808!3.83e-07!9;UBERON:0001277!3.83e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,3.73e-12,11;UBERON:0000490,5.40e-11,66;UBERON:0003350,8.83e-11,9;UBERON:0004808,8.83e-11,9;UBERON:0001277,8.83e-11,9;UBERON:0005911,5.34e-10,69;UBERON:0000344,9.69e-09,15;UBERON:0003929,1.04e-08,55;UBERON:0004119,1.54e-08,118;UBERON:0000925,1.54e-08,118;UBERON:0006595,1.54e-08,118;UBERON:0001007,1.84e-08,116;UBERON:0001555,1.84e-08,116;UBERON:0007026,1.84e-08,116;UBERON:0004921,9.95e-08,114;UBERON:0001242,1.14e-07,13;UBERON:0001262,1.14e-07,13;UBERON:0004786,1.14e-07,13 | |||
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| |||
|short_description=p@chr4:115726172..115726197,+ | |||
}} |
Latest revision as of 14:18, 4 August 2015
Short description: | p@chr4:115726172..115726197, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:115726172..115726197, + |
Coexpression cluster: | MCL_coexpression_mm9:441 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 3.73e-12 | 11 |
unilaminar epithelium | 5.40e-11 | 66 |
epithelium of mucosa | 8.83e-11 | 9 |
gastrointestinal system epithelium | 8.83e-11 | 9 |
intestinal epithelium | 8.83e-11 | 9 |
endo-epithelium | 5.34e-10 | 69 |
mucosa | 9.69e-09 | 15 |
gut epithelium | 1.04e-08 | 55 |
endoderm-derived structure | 1.54e-08 | 118 |
endoderm | 1.54e-08 | 118 |
presumptive endoderm | 1.54e-08 | 118 |
digestive system | 1.84e-08 | 116 |
digestive tract | 1.84e-08 | 116 |
primitive gut | 1.84e-08 | 116 |
subdivision of digestive tract | 9.95e-08 | 114 |
intestinal mucosa | 1.14e-07 | 13 |
wall of intestine | 1.14e-07 | 13 |
gastrointestinal system mucosa | 1.14e-07 | 13 |