FFCP PHASE1:Hg19::chr9:125141103..125141134,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:125141103..125141134,- | |||
|coexpression_cluster_id=C2017 | |||
|description=CAGE_peak_at_chr9:125141103..125141134,- | |||
|id=chr9:125141103..125141134,- | |||
|ontology_enrichment_celltype=CL:0000057!1.80e-12!75;CL:0000055!5.41e-09!180;CL:0000048!3.47e-07!430;CL:0000723!8.07e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002548;9.35e-14;6!CL:0002494;4.38e-10;16!CL:0000057;4.03e-09;73!CL:0002552;1.06e-08;5!CL:0000632;3.28e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.81e-16,76;CL:0002548,1.92e-13,6;CL:0002494,6.88e-10,16;CL:0002552,8.97e-09,5;CL:0000632,2.89e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.65e-10!110;UBERON:0001009!9.67e-10!113;UBERON:0000926!7.39e-08!448;UBERON:0004120!7.39e-08!448;UBERON:0006603!7.39e-08!448;UBERON:0000914!9.39e-08!83;UBERON:0002329!9.39e-08!83;UBERON:0003077!9.39e-08!83;UBERON:0003059!9.39e-08!83;UBERON:0007282!9.39e-08!83;UBERON:0009618!9.39e-08!83;UBERON:0007285!9.39e-08!83;UBERON:0004872!2.68e-07!84;UBERON:0004290!3.29e-07!70;UBERON:0004573!3.41e-07!33;UBERON:0004571!3.41e-07!33;UBERON:0000178!7.28e-07!15;UBERON:0000179!7.28e-07!15;UBERON:0000463!7.28e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.38e-12;15!UBERON:0000179;3.38e-12;15!UBERON:0000463;3.38e-12;15!UBERON:0000948;7.07e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,5.71e-15,109;UBERON:0001009,2.46e-14,112;UBERON:0000178,2.91e-12,15;UBERON:0000179,2.91e-12,15;UBERON:0000463,2.91e-12,15;UBERON:0000948,1.73e-07,24;UBERON:0005498,1.73e-07,24;UBERON:0004140,1.73e-07,24;UBERON:0009881,1.73e-07,24;UBERON:0004141,1.73e-07,24;UBERON:0003084,1.73e-07,24;UBERON:0007005,1.73e-07,24;UBERON:0004139,1.73e-07,24;UBERON:0004291,1.73e-07,24 | |||
|phase1_expression=1.99846217197612,2.5692062866918,1.40954404095971,0,0,2.61701557230111,2.53299878168311,3.15859936713415,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0.336985893439485,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0.696518949197069,1.99436940778298,0,0,0,0,0,0.694281003215189,0.56530794192401,2.93649605346934,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.183201743930407,1.31780417436063,0,0,2.48485975847659,2.15271869829786,0.132409180813219,7.74458876021797,3.19201543978521,1.12135520028461,1.06748995729705,1.2333377420858,2.17847724779836,2.55950276932407,2.45192854670188,0,0,0.468642863667593,4.68240115245481,1.1409436430889,2.39117888882882,0.23486899728753,0.323745888736263,0.280901613404497,4.69554593886255,2.94802361548243,4.95963749643674,2.37600571456411,0.741800787835671,0,1.43723628363248,1.34668891163253,2.37725187756732,2.49357703935765,0,0.30648779579902,0.45071417671979,1.36118619792025,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0,0.504867548488229,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,1.38134921352481,0.464367928031979,1.44375896333917,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,1.2347220339942,2.94017422771084,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0.492434012174795,0.234004265139238,0.594524649154913,0,0,0,0.0895585227028483,0,0,0,0.616339038092582,0.207328115540772,0.288239906833923,0.37872730027914,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,7.15312891703765,0,0,1.04007436911366,0.257207374262142,0,1.5985330740966,4.28933980974443,0,0,0.325736184293735,2.13235169245527,0,0,0,0.199945982364114,0,2.00902836572851,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0.12269149171914,1.50051156317903,0,2.07970861530807,3.21172179834891,1.41932173530541,0.117141414992713,0,0,0,0,0,0.955719759148911,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0.30239029332968,0.744323423456331,1.07423381301644,0.561320188866147,1.79394808957981,0,3.21707842287215,0,0.616838775210622,0.710246901252508,0.0821271560138091,0,0.348631135379878,0,0,0.184161977871793,0.68888668898764,0.910455840033585,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.308097234229289,0.767518373630648,0.137836572484531,0.107420244868274,0.435050081742686,0.0852266274161009,0,0,0,0,0,0.464845549297286,3.77774816196768,0,5.5446044431696,0.532306030317022,0,0.55597265731176,0,0,0.632758849437452,1.33441135746677,1.02359116524534,0.42793898803392,1.90921948755562,0.78494864019923,0.359744915166629,0.54907405947211,0.353437207037059,0.606547444719948,0,0.842516912477962,0,0.974853958525138,0,0.682499557039929,1.69686518344455,0,3.85955740482287,1.32687795048244,1.31535265576129,0,0,0,0,0.563391205064483,0,0,0,0.354761064070598,0,0.329294892959902,1.13841952129715,1.04980416073495,0,0.670302275535787,0,0,0,0,0,0.229723400206959,4.05958087385735,2.29391162142713,6.83576624608995,3.57347663186684,1.23408681925858,1.94541993357815,3.24018862342869,3.96562588147135,0,0,0,0,0,0,0,0.997896857164083,0.191505370132367,0.423347165447766,0.324621940274555,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0.390776190804081,0,0,0.540911356951966,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0.123084805461069,0.622079175323615,0,0.179021174675609,0,7.20096861149615,2.3948309234694,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,2.04074333313532,0.498635045700469,0,0,0,0,0.635746315921515,0,0,0,0,2.98578579323551,0.353830258013357,1.83309043480088,0,0,0,0.539209063845416,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.694238953340524,0.881931576729399,0,0.17472666824203,0,0,0,0,0.872901148395775,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,8.64719720501769,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0.449947783103001,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0.653174720218818,0,0.82092520749339,0,0.226624183040251,0.293104467356165,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,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| |||
|short_description=p@chr9:125141103..125141134,- | |||
}} |
Latest revision as of 22:30, 31 July 2015
Short description: | p@chr9:125141103..125141134, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:125141103..125141134, - |
Coexpression cluster: | C2017_Fibroblast_smooth_Smooth_bladder_hepatic_Cardiac_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.81e-16 | 76 |
cardiac fibroblast | 1.92e-13 | 6 |
cardiocyte | 6.88e-10 | 16 |
fibroblast of gingiva | 8.97e-09 | 5 |
hepatic stellate cell | 2.89e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 5.71e-15 | 109 |
circulatory system | 2.46e-14 | 112 |
blood | 2.91e-12 | 15 |
haemolymphatic fluid | 2.91e-12 | 15 |
organism substance | 2.91e-12 | 15 |
heart | 1.73e-07 | 24 |
primitive heart tube | 1.73e-07 | 24 |
primary heart field | 1.73e-07 | 24 |
anterior lateral plate mesoderm | 1.73e-07 | 24 |
heart tube | 1.73e-07 | 24 |
heart primordium | 1.73e-07 | 24 |
cardiac mesoderm | 1.73e-07 | 24 |
cardiogenic plate | 1.73e-07 | 24 |
heart rudiment | 1.73e-07 | 24 |