FFCP PHASE1:Mm9::chr5:5380607..5380682,-: Difference between revisions
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{{FFCP|EntrezGene=18647|HGNC=|UniProt=O35495,Q6NVF8,Q8BFX6,Q8BQ67|association_with_transcript=-356bp_to_ENSMUST00000132390,NM_011074,uc008wii.2,uc008wik.2,uc008wil.2,uc008wim.2_5end|description=CAGE_peak_2_at_Cdk14_5end|id=chr5:5380607..5380682,-|ontology_enrichment_celltype=CL:0000393!4.69e-08!39;CL:0000211!4.69e-08!39;CL:0000117!1.12e-07!23;CL:0000337!1.12e-07!23;CL:0000540!9.29e-07!33;CL:0000047!9.29e-07!33;CL:0000031!9.29e-07!33;CL:0000404!9.29e-07!33|ontology_enrichment_celltype_v019_2=CL:0000393,4.39e-08,39;CL:0000211,4.39e-08,39;CL:0000117,1.05e-07,23;CL:0000337,1.05e-07,23;CL:0000540,8.80e-07,33;CL:0000047,8.80e-07,33;CL:0000031,8.80e-07,33;CL:0000404,8.80e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!3.49e-09!14;UBERON:0000117!3.49e-09!14;UBERON:0000171!3.49e-09!14;UBERON:0000170!3.49e-09!14;UBERON:0005597!3.49e-09!14;UBERON:0000118!3.49e-09!14;UBERON:0000468!4.25e-07!333;UBERON:0005178!6.72e-07!17;UBERON:0005181!6.72e-07!17;UBERON:0002224!6.72e-07!17;UBERON:0000915!6.72e-07!17;UBERON:0008947!6.72e-07!17;UBERON:0003258!6.72e-07!17;UBERON:0005153!7.18e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.23e-09,14;UBERON:0000117,3.23e-09,14;UBERON:0000171,3.23e-09,14;UBERON:0000170,3.23e-09,14;UBERON:0005597,3.23e-09,14;UBERON:0000118,3.23e-09,14;UBERON:0005178,6.36e-07,17;UBERON:0005181,6.36e-07,17;UBERON:0002224,6.36e-07,17;UBERON:0000915,6.36e-07,17;UBERON:0008947,6.36e-07,17;UBERON:0003258,6.36e-07,17;UBERON:0005153,6.80e-07,17;UBERON:0004121,8.49e-07,95;UBERON:0000924,8.49e-07,95;UBERON:0006601,8.49e-07,95|phase1_expression=11.0502704502308,0,0,0,0,1.34303417529512,0.467225281191051,0,0,0,0,0,0,0,1.33243904726265,0.809901069559304,2.09868563438444,0.473193248037357,0.959801035240171,0.42438965179803,7.22867966284093,1.68794617041505,1.04479915655574,0.319984845586813,0.22940928106717,0,0.430761996159075,0.430942465371778,0,1.00812051903972,0.443461021310609,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0.588231488031014,0,0.485510353031154,11.0789199818508,13.4831318521954,5.50640256485045,1.56478268869608,5.23260375313072,3.95435128922049,7.38833616482277,4.33957907038624,5.75010257459886,0,0,0,6.94600477297057,7.44986943840768,7.21940929188419,14.1621522601718,9.52183762689659,10.775133859605,6.09920157724438,5.33576877666684,6.74924787961049,6.92206453796882,5.6838409195688,4.19440154725767,4.61061966385865,8.29516898467821,6.34527910158946,7.36137364729837,4.57041575046086,4.63823935998388,12.6165523191403,11.8848384062613,11.9498442259303,11.0115880999389,8.93811366596314,8.75557239560588,12.5291973343684,7.41049913179518,13.5437476344758,7.81712397203867,6.19038871034848,10.0846843532695,8.54422897873636,6.83384067835694,14.1663578827228,4.69502398665741,4.45872204630035,1.73918693221007,0.860423876981386,0,0,0,0,2.80888840263504,5.62420064507591,5.97507810586598,4.94675404314476,7.32385782838739,11.5493829672886,15.2883143823987,14.2213340630666,2.38140145112336,3.80039798212648,1.51657333504435,1.48439043634778,2.07150306917737,2.22663208597237,4.8575891494518,3.65358573974569,2.99800146432876,2.11011696773672,4.8211369925639,1.63366568728578,1.23597483867187,4.62717942143717,2.65383165584962,9.22071044700232,5.07935492458905,9.21262980956922,0,4.09893115816166,5.44561437714983,1.02182822083437,1.1981512450592,1.19980546198682,0.381210681219194,7.04016005202667,4.57500602818627,7.79056983099759,2.9550134432687,4.34716277461562,5.194701113989,6.32740925964255,13.850153483643,4.10543003013307,3.0326731012041,11.3638602178696,6.76626303406059,6.89706313300419,11.884100567153,10.3986324306643,13.2671173345089,11.7864622662062,12.8371362646828,6.20888089773638,7.11374376678379,9.64441008855878,8.97350733236139,8.54863356467542,8.06337022754234,7.3132954969655,7.20237477427802,7.36426787228425,2.1066395619397,0.51469581422943,0.284163499395593,7.87077935634907,7.27030785941398,7.20248245844059,7.81257627431194,7.08351234290654,6.47921874126989,7.90615412151387,10.4626626545851,6.889155199663,7.5697530960201,6.07419617092652,6.32336714457675,3.94739966048397,3.73235195994786,4.16039898157152,6.30869845692382,9.05560588937703,0.991256348951394,1.05780226665418,8.31824177087412,6.73486348395272,8.63411990858025,3.63030344322017,2.89091456998331,3.80451252225118,2.84717436926707,2.14108641141214,3.77002813200404,2.98434708061726,3.31438948102504,3.59527763461689,1.08069024937347,1.59313018603494,3.79335801906163,5.1411830674378,5.63538678365402,7.33144780243131,7.17624202520215,7.71494018793504,4.3000845244495,1.62371162777562,1.41298855057237,1.23397163921801,0.592905254174298,3.33690211432188,1.17935397067922,1.34917267430912,0.405720242777006,0.72353147925725,1.52775511068852,1.15078454980324,1.29708181420028,0.823684239564244,1.43768206527355,2.23284568601102,1.5601883655728,2.02063102357689,1.79397413521912,1.4473305640901,12.5632169313291,7.39016505904891,8.47417877498535,10.5241953180617,11.2651319178481,18.928207090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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18647 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=O35495,Q6NVF8,Q8BFX6,Q8BQ67 | |||
|association_with_transcript=-356bp_to_ENSMUST00000132390,NM_011074,uc008wii.2,uc008wik.2,uc008wil.2,uc008wim.2_5end | |||
|cluster_id=chr5:5380607..5380682,- | |||
|description=CAGE_peak_2_at_Cdk14_5end | |||
|id=chr5:5380607..5380682,- | |||
|ontology_enrichment_celltype=CL:0000393!4.69e-08!39;CL:0000211!4.69e-08!39;CL:0000117!1.12e-07!23;CL:0000337!1.12e-07!23;CL:0000540!9.29e-07!33;CL:0000047!9.29e-07!33;CL:0000031!9.29e-07!33;CL:0000404!9.29e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.39e-08,39;CL:0000211,4.39e-08,39;CL:0000117,1.05e-07,23;CL:0000337,1.05e-07,23;CL:0000540,8.80e-07,33;CL:0000047,8.80e-07,33;CL:0000031,8.80e-07,33;CL:0000404,8.80e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!3.49e-09!14;UBERON:0000117!3.49e-09!14;UBERON:0000171!3.49e-09!14;UBERON:0000170!3.49e-09!14;UBERON:0005597!3.49e-09!14;UBERON:0000118!3.49e-09!14;UBERON:0000468!4.25e-07!333;UBERON:0005178!6.72e-07!17;UBERON:0005181!6.72e-07!17;UBERON:0002224!6.72e-07!17;UBERON:0000915!6.72e-07!17;UBERON:0008947!6.72e-07!17;UBERON:0003258!6.72e-07!17;UBERON:0005153!7.18e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.23e-09,14;UBERON:0000117,3.23e-09,14;UBERON:0000171,3.23e-09,14;UBERON:0000170,3.23e-09,14;UBERON:0005597,3.23e-09,14;UBERON:0000118,3.23e-09,14;UBERON:0005178,6.36e-07,17;UBERON:0005181,6.36e-07,17;UBERON:0002224,6.36e-07,17;UBERON:0000915,6.36e-07,17;UBERON:0008947,6.36e-07,17;UBERON:0003258,6.36e-07,17;UBERON:0005153,6.80e-07,17;UBERON:0004121,8.49e-07,95;UBERON:0000924,8.49e-07,95;UBERON:0006601,8.49e-07,95 | |||
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| |||
|short_description=p2@Cdk14 | |||
}} |
Latest revision as of 02:11, 26 September 2015
Short description: | p2@Cdk14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdk14_5end |
Coexpression cluster: | NA |
Association with transcript: | -356bp_to_ENSMUST00000132390, NM_011074, uc008wii.2, uc008wik.2, uc008wil.2, uc008wim.2_5end |
EntrezGene: | Cdk14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.39e-08 | 39 |
electrically active cell | 4.39e-08 | 39 |
CNS neuron (sensu Vertebrata) | 1.05e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.05e-07 | 23 |
neuron | 8.80e-07 | 33 |
neuronal stem cell | 8.80e-07 | 33 |
neuroblast | 8.80e-07 | 33 |
electrically signaling cell | 8.80e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
lung | 3.23e-09 | 14 |
respiratory tube | 3.23e-09 | 14 |
respiration organ | 3.23e-09 | 14 |
pair of lungs | 3.23e-09 | 14 |
lung primordium | 3.23e-09 | 14 |
lung bud | 3.23e-09 | 14 |
thoracic cavity element | 6.36e-07 | 17 |
thoracic segment organ | 6.36e-07 | 17 |
thoracic cavity | 6.36e-07 | 17 |
thoracic segment of trunk | 6.36e-07 | 17 |
respiratory primordium | 6.36e-07 | 17 |
endoderm of foregut | 6.36e-07 | 17 |
epithelial bud | 6.80e-07 | 17 |
ectoderm-derived structure | 8.49e-07 | 95 |
ectoderm | 8.49e-07 | 95 |
presumptive ectoderm | 8.49e-07 | 95 |