FFCP PHASE1:Mm9::chr6:106698057..106698071,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:106698057..106698071,-|id=chr6:106698057..106698071,-|ontology_enrichment_celltype=CL:0000553!1.10e-19!6;CL:0000556!1.10e-19!6;CL:0000050!4.52e-13!9;CL:0000414!1.17e-10!11;CL:0000763!4.50e-10!16;CL:0000839!5.53e-09!13;CL:0000049!2.12e-08!19;CL:0002027!4.56e-07!3;CL:0002006!4.56e-07!3;CL:0002024!4.56e-07!3|ontology_enrichment_celltype_v019_2=CL:0000553,8.72e-30,6;CL:0000556,8.72e-30,6;CL:0000050,4.69e-20,9;CL:0000839,4.85e-14,13;CL:0000945,2.59e-12,1;CL:0000236,2.59e-12,1;CL:0000826,2.59e-12,1;CL:0000763,1.71e-11,16;CL:0002031,2.76e-11,25;CL:0000049,9.64e-10,19;CL:0000988,7.38e-09,32;CL:0002032,7.38e-09,32;CL:0000037,7.38e-09,32;CL:0000837,7.38e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.80e-14!48;UBERON:0002390!1.52e-12!45;UBERON:0003061!1.52e-12!45;UBERON:0002106!3.00e-12!6;UBERON:0004457!3.00e-12!6;UBERON:0000042!3.00e-12!6;UBERON:0004854!3.00e-12!6;UBERON:0009034!3.00e-12!6;UBERON:0002095!3.00e-12!6;UBERON:0004782!3.00e-12!6;UBERON:0003281!3.00e-12!6;UBERON:0009664!3.00e-12!6;UBERON:0002296!3.00e-12!6;UBERON:0005602!3.00e-12!6;UBERON:0001179!3.00e-12!6;UBERON:0006293!3.00e-12!6;UBERON:0002371!4.50e-10!16;UBERON:0002405!7.53e-09!70;UBERON:0003081!8.41e-08!88;UBERON:0003887!2.10e-07!10;UBERON:0001474!3.51e-07!22;UBERON:0004765!3.51e-07!22;UBERON:0001434!3.51e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.01e-12,1;UBERON:0001097,2.01e-12,1;UBERON:0003968,2.01e-12,1;UBERON:0001467,2.01e-12,1;UBERON:0002371,1.71e-11,16;UBERON:0001474,1.83e-08,22;UBERON:0004765,1.83e-08,22;UBERON:0001434,1.83e-08,22;UBERON:0002193,2.50e-08,48;UBERON:0002405,2.50e-08,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.41732687172878,0,4.10100814965709,4.66189074259512,1.69755860719212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18117387875057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84831672011889,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.376736914009382,1.0935538217682,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:106698057..106698071,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:106698057..106698071,- | |||
|description=CAGE_peak_at_chr6:106698057..106698071,- | |||
|id=chr6:106698057..106698071,- | |||
|ontology_enrichment_celltype=CL:0000553!1.10e-19!6;CL:0000556!1.10e-19!6;CL:0000050!4.52e-13!9;CL:0000414!1.17e-10!11;CL:0000763!4.50e-10!16;CL:0000839!5.53e-09!13;CL:0000049!2.12e-08!19;CL:0002027!4.56e-07!3;CL:0002006!4.56e-07!3;CL:0002024!4.56e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.72e-30,6;CL:0000556,8.72e-30,6;CL:0000050,4.69e-20,9;CL:0000839,4.85e-14,13;CL:0000945,2.59e-12,1;CL:0000236,2.59e-12,1;CL:0000826,2.59e-12,1;CL:0000763,1.71e-11,16;CL:0002031,2.76e-11,25;CL:0000049,9.64e-10,19;CL:0000988,7.38e-09,32;CL:0002032,7.38e-09,32;CL:0000037,7.38e-09,32;CL:0000837,7.38e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.80e-14!48;UBERON:0002390!1.52e-12!45;UBERON:0003061!1.52e-12!45;UBERON:0002106!3.00e-12!6;UBERON:0004457!3.00e-12!6;UBERON:0000042!3.00e-12!6;UBERON:0004854!3.00e-12!6;UBERON:0009034!3.00e-12!6;UBERON:0002095!3.00e-12!6;UBERON:0004782!3.00e-12!6;UBERON:0003281!3.00e-12!6;UBERON:0009664!3.00e-12!6;UBERON:0002296!3.00e-12!6;UBERON:0005602!3.00e-12!6;UBERON:0001179!3.00e-12!6;UBERON:0006293!3.00e-12!6;UBERON:0002371!4.50e-10!16;UBERON:0002405!7.53e-09!70;UBERON:0003081!8.41e-08!88;UBERON:0003887!2.10e-07!10;UBERON:0001474!3.51e-07!22;UBERON:0004765!3.51e-07!22;UBERON:0001434!3.51e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.01e-12,1;UBERON:0001097,2.01e-12,1;UBERON:0003968,2.01e-12,1;UBERON:0001467,2.01e-12,1;UBERON:0002371,1.71e-11,16;UBERON:0001474,1.83e-08,22;UBERON:0004765,1.83e-08,22;UBERON:0001434,1.83e-08,22;UBERON:0002193,2.50e-08,48;UBERON:0002405,2.50e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.41732687172878,0,4.10100814965709,4.66189074259512,1.69755860719212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18117387875057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84831672011889,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.376736914009382,1.0935538217682,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:106698057..106698071,- | |||
}} |
Latest revision as of 21:00, 4 August 2015
Short description: | p@chr6:106698057..106698071, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:106698057..106698071, - |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.72e-30 | 6 |
megakaryocyte | 8.72e-30 | 6 |
megakaryocyte-erythroid progenitor cell | 4.69e-20 | 9 |
myeloid lineage restricted progenitor cell | 4.85e-14 | 13 |
lymphocyte of B lineage | 2.59e-12 | 1 |
B cell | 2.59e-12 | 1 |
pro-B cell | 2.59e-12 | 1 |
myeloid cell | 1.71e-11 | 16 |
hematopoietic lineage restricted progenitor cell | 2.76e-11 | 25 |
common myeloid progenitor | 9.64e-10 | 19 |
hematopoietic cell | 7.38e-09 | 32 |
hematopoietic oligopotent progenitor cell | 7.38e-09 | 32 |
hematopoietic stem cell | 7.38e-09 | 32 |
hematopoietic multipotent progenitor cell | 7.38e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.01e-12 | 1 |
axillary lymph node | 2.01e-12 | 1 |
peripheral lymph node | 2.01e-12 | 1 |
shoulder | 2.01e-12 | 1 |
bone marrow | 1.71e-11 | 16 |
bone element | 1.83e-08 | 22 |
skeletal element | 1.83e-08 | 22 |
skeletal system | 1.83e-08 | 22 |
hemolymphoid system | 2.50e-08 | 48 |
immune system | 2.50e-08 | 48 |