FFCP PHASE1:Mm9::chr6:21802509..21802520,-: Difference between revisions
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{{FFCP|EntrezGene=269831|HGNC=|MCL_coexpression_id=8|UniProt=Q8BKT6|association_with_transcript=0bp_to_ENSMUST00000031678,ENSMUST00000090596,NM_173007,uc009bar.1_5end|description=CAGE_peak_3_at_Tspan12_5end|id=chr6:21802509..21802520,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.62e-08,5;CL:0002250,1.60e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!7.85e-17!66;UBERON:0002107!2.95e-14!22;UBERON:0007499!2.95e-14!22;UBERON:0006925!2.95e-14!22;UBERON:0009497!2.95e-14!22;UBERON:0000015!2.95e-14!22;UBERON:0002423!2.95e-14!22;UBERON:0006235!2.95e-14!22;UBERON:0008835!2.95e-14!22;UBERON:0003894!2.95e-14!22;UBERON:0004161!2.95e-14!22;UBERON:0008836!2.95e-14!22;UBERON:0002365!3.44e-14!25;UBERON:0002330!3.44e-14!25;UBERON:0009854!3.89e-13!23;UBERON:0009856!3.89e-13!23;UBERON:0005177!1.33e-12!85;UBERON:0005172!2.00e-12!49;UBERON:0005173!2.00e-12!49;UBERON:0002417!2.00e-12!49;UBERON:0000916!2.00e-12!49;UBERON:0001007!1.71e-10!128;UBERON:0001555!1.71e-10!128;UBERON:0007026!1.71e-10!128;UBERON:0004921!2.26e-10!126;UBERON:0004185!2.26e-10!126;UBERON:0002100!2.91e-10!98;UBERON:0004119!6.65e-10!130;UBERON:0000925!6.65e-10!130;UBERON:0006595!6.65e-10!130;UBERON:0005256!2.42e-09!47;UBERON:0000466!8.50e-08!79;UBERON:0003104!1.47e-07!131;UBERON:0009142!1.47e-07!131;UBERON:0005911!5.20e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.61e-35,22;UBERON:0007499,3.61e-35,22;UBERON:0006925,3.61e-35,22;UBERON:0009497,3.61e-35,22;UBERON:0000015,3.61e-35,22;UBERON:0002423,3.61e-35,22;UBERON:0006235,3.61e-35,22;UBERON:0008835,3.61e-35,22;UBERON:0003894,3.61e-35,22;UBERON:0004161,3.61e-35,22;UBERON:0008836,3.61e-35,22;UBERON:0002365,8.04e-34,25;UBERON:0002330,8.04e-34,25;UBERON:0009854,1.99e-33,23;UBERON:0009856,1.99e-33,23;UBERON:0005256,1.87e-20,45;UBERON:0005172,4.42e-18,49;UBERON:0005173,4.42e-18,49;UBERON:0002417,4.42e-18,49;UBERON:0000916,4.42e-18,49;UBERON:0009569,1.32e-17,66;UBERON:0003929,1.35e-17,55;UBERON:0005911,5.53e-17,69;UBERON:0003104,1.38e-16,61;UBERON:0009142,1.38e-16,61;UBERON:0005177,5.37e-15,79;UBERON:0001007,1.89e-14,116;UBERON:0001555,1.89e-14,116;UBERON:0007026,1.89e-14,116;UBERON:0004119,4.46e-14,118;UBERON:0000925,4.46e-14,118;UBERON:0006595,4.46e-14,118;UBERON:0002530,6.73e-14,65;UBERON:0003914,6.81e-14,47;UBERON:0004921,9.84e-14,114;UBERON:0000490,1.03e-13,66;UBERON:0002100,1.10e-13,90;UBERON:0001041,2.57e-12,80;UBERON:0002368,4.03e-11,60;UBERON:0000949,1.81e-08,72;UBERON:0004111,1.22e-07,122|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.11994695955385,0,0,0.430761996159075,0.861884930743556,0.950117097281869,0.252030129759931,0,0,0,0,4.62162591602039,2.49351968037739,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0.420649922702764,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0,0,0,0,0.0755715601067855,0,3.44169550792555,6.79971333707751,11.873470216032,9.09686984426737,11.6486990645307,2.80888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,1.51657333504435,5.02409070763864,0,0.593768556259299,0,0.304465478312141,0,0.452167921657868,0.587943535678524,0.502666365318702,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.324482526135515,0.101839363850316,0,0.505445516867349,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0.215567992932842,0.756424320671277,0.703804496655795,0.657587197282725,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,1.70630600428187,0.232236671860439,0.902072229254653,0.80673409849337,0,0.760902504450237,0.949058123089023,0.494096864172033,0.502670417600539,0.596869416123452,0.19496408711912,0,0.432276099749388,1.1948476395262,0.569003702859245,0.114248512609729,2.25415471346161,0.203651327845314,0.581857461502877,0.49095073923223,1.07502113111237,0.295220295959204,0,0.493588655687202,13.933273473096,0.500535317148282,1.17935397067922,0.449724224769707,1.01430060694251,1.4470629585145,1.01850340712568,4.60313819921297,11.8358715545776,3.84385978463314,10.0637744569148,4.09355042435354,5.92871578917665,5.80931419278357,5.02312757861354,15.4381926836277,0.739012760666419,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.502518772325447,0.476087281772027,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,1.3109065177259,1.38147985492716,1.15719246865209,0,0,0,0.551873492609465,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0,0,0.727067458955011,0.712994756769443,0.316036757935816,0,0,2.04263763452273,0.360122188062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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269831 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BKT6 | |||
|association_with_transcript=0bp_to_ENSMUST00000031678,ENSMUST00000090596,NM_173007,uc009bar.1_5end | |||
|cluster_id=chr6:21802509..21802520,- | |||
|description=CAGE_peak_3_at_Tspan12_5end | |||
|id=chr6:21802509..21802520,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.62e-08,5;CL:0002250,1.60e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!7.85e-17!66;UBERON:0002107!2.95e-14!22;UBERON:0007499!2.95e-14!22;UBERON:0006925!2.95e-14!22;UBERON:0009497!2.95e-14!22;UBERON:0000015!2.95e-14!22;UBERON:0002423!2.95e-14!22;UBERON:0006235!2.95e-14!22;UBERON:0008835!2.95e-14!22;UBERON:0003894!2.95e-14!22;UBERON:0004161!2.95e-14!22;UBERON:0008836!2.95e-14!22;UBERON:0002365!3.44e-14!25;UBERON:0002330!3.44e-14!25;UBERON:0009854!3.89e-13!23;UBERON:0009856!3.89e-13!23;UBERON:0005177!1.33e-12!85;UBERON:0005172!2.00e-12!49;UBERON:0005173!2.00e-12!49;UBERON:0002417!2.00e-12!49;UBERON:0000916!2.00e-12!49;UBERON:0001007!1.71e-10!128;UBERON:0001555!1.71e-10!128;UBERON:0007026!1.71e-10!128;UBERON:0004921!2.26e-10!126;UBERON:0004185!2.26e-10!126;UBERON:0002100!2.91e-10!98;UBERON:0004119!6.65e-10!130;UBERON:0000925!6.65e-10!130;UBERON:0006595!6.65e-10!130;UBERON:0005256!2.42e-09!47;UBERON:0000466!8.50e-08!79;UBERON:0003104!1.47e-07!131;UBERON:0009142!1.47e-07!131;UBERON:0005911!5.20e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.61e-35,22;UBERON:0007499,3.61e-35,22;UBERON:0006925,3.61e-35,22;UBERON:0009497,3.61e-35,22;UBERON:0000015,3.61e-35,22;UBERON:0002423,3.61e-35,22;UBERON:0006235,3.61e-35,22;UBERON:0008835,3.61e-35,22;UBERON:0003894,3.61e-35,22;UBERON:0004161,3.61e-35,22;UBERON:0008836,3.61e-35,22;UBERON:0002365,8.04e-34,25;UBERON:0002330,8.04e-34,25;UBERON:0009854,1.99e-33,23;UBERON:0009856,1.99e-33,23;UBERON:0005256,1.87e-20,45;UBERON:0005172,4.42e-18,49;UBERON:0005173,4.42e-18,49;UBERON:0002417,4.42e-18,49;UBERON:0000916,4.42e-18,49;UBERON:0009569,1.32e-17,66;UBERON:0003929,1.35e-17,55;UBERON:0005911,5.53e-17,69;UBERON:0003104,1.38e-16,61;UBERON:0009142,1.38e-16,61;UBERON:0005177,5.37e-15,79;UBERON:0001007,1.89e-14,116;UBERON:0001555,1.89e-14,116;UBERON:0007026,1.89e-14,116;UBERON:0004119,4.46e-14,118;UBERON:0000925,4.46e-14,118;UBERON:0006595,4.46e-14,118;UBERON:0002530,6.73e-14,65;UBERON:0003914,6.81e-14,47;UBERON:0004921,9.84e-14,114;UBERON:0000490,1.03e-13,66;UBERON:0002100,1.10e-13,90;UBERON:0001041,2.57e-12,80;UBERON:0002368,4.03e-11,60;UBERON:0000949,1.81e-08,72;UBERON:0004111,1.22e-07,122 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.11994695955385,0,0,0.430761996159075,0.861884930743556,0.950117097281869,0.252030129759931,0,0,0,0,4.62162591602039,2.49351968037739,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0.420649922702764,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0,0,0,0,0.0755715601067855,0,3.44169550792555,6.79971333707751,11.873470216032,9.09686984426737,11.6486990645307,2.80888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,1.51657333504435,5.02409070763864,0,0.593768556259299,0,0.304465478312141,0,0.452167921657868,0.587943535678524,0.502666365318702,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.324482526135515,0.101839363850316,0,0.505445516867349,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0.215567992932842,0.756424320671277,0.703804496655795,0.657587197282725,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,1.70630600428187,0.232236671860439,0.902072229254653,0.80673409849337,0,0.760902504450237,0.949058123089023,0.494096864172033,0.502670417600539,0.596869416123452,0.19496408711912,0,0.432276099749388,1.1948476395262,0.569003702859245,0.114248512609729,2.25415471346161,0.203651327845314,0.581857461502877,0.49095073923223,1.07502113111237,0.295220295959204,0,0.493588655687202,13.933273473096,0.500535317148282,1.17935397067922,0.449724224769707,1.01430060694251,1.4470629585145,1.01850340712568,4.60313819921297,11.8358715545776,3.84385978463314,10.0637744569148,4.09355042435354,5.92871578917665,5.80931419278357,5.02312757861354,15.4381926836277,0.739012760666419,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.502518772325447,0.476087281772027,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,1.3109065177259,1.38147985492716,1.15719246865209,0,0,0,0.551873492609465,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0,0,0.727067458955011,0.712994756769443,0.316036757935816,0,0,2.04263763452273,0.36012218806262,0.517434735131018,0.214337035031592,0.532020700926821,0.178368817602071,0,0.304464949114599,0,0,6.3953235435939,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0.790839983952838,0.609958401380546,0.648032044930808,0.209088296014469,0.218362563746178,0.134864346384821,0.578574190077352,0,2.59229946583586,3.10669656543463,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,1.9318959403219,0,0.183151624267265,0.214368379079066,2.00628841614145,0,0,0,0.515559547031063,0,0,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0,0,0.888986911206461,0.412070114477788,0,0.505394423527595,1.01391719956096,0,0.37456602987953,0.448176066834085,0.287177344778066,0.952587382566147,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0.953744759789284,0.581385666529314,0.282328141245992,0.169229215783353,0.548783918618318,0.789209134313529,0.271608227691724,0,0,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,1.28922632428979,0.191288332068843,0,0 | |||
|short_description=p3@Tspan12 | |||
}} |
Latest revision as of 23:55, 26 September 2015
Short description: | p3@Tspan12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tspan12_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000031678, ENSMUST00000090596, NM_173007, uc009bar.1_5end |
EntrezGene: | Tspan12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.62e-08 | 5 |
intestinal crypt stem cell | 1.60e-07 | 3 |