FFCP PHASE1:Mm9::chr6:53571193..53571200,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:53571193..53571200,+|id=chr6:53571193..53571200,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.19e-07,3;CL:0002202,1.19e-07,3;CL:0000069,1.19e-07,3;CL:0002632,1.19e-07,3;CL:0002368,1.19e-07,3;CL:0000307,1.19e-07,3;CL:0000377,1.19e-07,3;CL:0000213,5.73e-07,1;CL:0002078,5.73e-07,1;CL:0000115,5.73e-07,1;CL:0002262,5.73e-07,1;CL:1000398,5.73e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.70e-11,23;UBERON:0001009,8.70e-11,23;UBERON:0007100,2.89e-10,18;UBERON:0000948,2.89e-10,18;UBERON:0005498,2.89e-10,18;UBERON:0004140,2.89e-10,18;UBERON:0009881,2.89e-10,18;UBERON:0004141,2.89e-10,18;UBERON:0003084,2.89e-10,18;UBERON:0007005,2.89e-10,18;UBERON:0004139,2.89e-10,18;UBERON:0004291,2.89e-10,18;UBERON:0003126,1.19e-07,3;UBERON:0001005,1.19e-07,3;UBERON:0007196,1.19e-07,3;UBERON:0001558,1.19e-07,3;UBERON:0004872,2.66e-07,33;UBERON:0002394,5.73e-07,1;UBERON:0001281,5.73e-07,1;UBERON:0000353,5.73e-07,1;UBERON:0003497,5.73e-07,1;UBERON:0003909,5.73e-07,1;UBERON:0003928,5.73e-07,1;UBERON:0003835,5.73e-07,1;UBERON:0003513,5.73e-07,1;UBERON:0001280,5.73e-07,1;UBERON:0004647,5.73e-07,1;UBERON:0002294,5.73e-07,1;UBERON:0001173,5.73e-07,1;UBERON:0004912,5.73e-07,1;UBERON:0005171,5.73e-07,1;UBERON:0003103,6.64e-07,43|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0.307213066512487,0,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0.226714680320357,2.89864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.432982082022428,1.52015919285059,1.01104889002957,0.22836775943812,0,0,0,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0.741584903203122,0.144599356919912,0,0.485300549842228,0,0,0,0.585561594023094,0.83778682725382,0,1.07833612055328,0.599902730993408,0.381210681219194,0.299581278809645,0,0.125654352112864,0,0,0,0.162241263067758,0.509196819251581,0.373220911830279,0,0,0.390361328888111,0.689706313300419,0,0.753524089178575,0.476255494059295,0.896796041993948,0.468508622798644,0,0.215567992932842,0.378212160335639,0.703804496655795,0.43839146485515,0.834141747676794,0.696504333044333,1.02891068203972,0.398068533636986,0,0.257347907114715,0.284163499395593,0.414251545071004,1.64168241986767,1.62055855314913,0.473489471170421,1.77087808572663,2.1597395804233,1.86027155800326,0.536546802799238,1.05088808130453,0.329119699826961,0.32833492815819,0.648550476366846,0.146199987425332,0.878200461164203,0.268412837520744,0.210289948564127,0,0,0,0,0.232236671860439,0,0,0,0,0.949058123089023,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0.184753190166605,0.568474235311454,0.488894929326078,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0,0,0.117211686592203,0,0.252470927204373,0.631016438832513,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0,0.292255857911312,0,0,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0.42366414172764,0.220528398054962,0.65954501176592,0.322928853391811,0.301564624640779,0.716234064018819,0.820704498725306,0.291480836629851,0.18542530201051,0,0,0,0.188368457004691,0,0,2.71965487990169,2.6590775941495,1.38199973804424,0,0.158167996790568,0,0.324016022465404,0.627264888043406,0,0.539457385539283,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.938857909166032,0.5208175393758,0.419437377702843,0,0.288030006257865,0,0.405450430580328,0.616265742988964,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.563047426353546,0,0.428736758158132,0,0,0,0,0.515559547031063,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0.754505365544305,0.37456602987953,0.256100609619477,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.685738504770831,0.354951612318675,0.476872379894642,0.436039249896986,0,0.25384382367503,0.365855945745545,0.789209134313529,0.271608227691724,1.12228454331548,0.237270036248348,0.591026894253381,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0|short_description=p@chr6:53571193..53571200,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:53571193..53571200,+ | |||
|description=CAGE_peak_at_chr6:53571193..53571200,+ | |||
|id=chr6:53571193..53571200,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.19e-07,3;CL:0002202,1.19e-07,3;CL:0000069,1.19e-07,3;CL:0002632,1.19e-07,3;CL:0002368,1.19e-07,3;CL:0000307,1.19e-07,3;CL:0000377,1.19e-07,3;CL:0000213,5.73e-07,1;CL:0002078,5.73e-07,1;CL:0000115,5.73e-07,1;CL:0002262,5.73e-07,1;CL:1000398,5.73e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.70e-11,23;UBERON:0001009,8.70e-11,23;UBERON:0007100,2.89e-10,18;UBERON:0000948,2.89e-10,18;UBERON:0005498,2.89e-10,18;UBERON:0004140,2.89e-10,18;UBERON:0009881,2.89e-10,18;UBERON:0004141,2.89e-10,18;UBERON:0003084,2.89e-10,18;UBERON:0007005,2.89e-10,18;UBERON:0004139,2.89e-10,18;UBERON:0004291,2.89e-10,18;UBERON:0003126,1.19e-07,3;UBERON:0001005,1.19e-07,3;UBERON:0007196,1.19e-07,3;UBERON:0001558,1.19e-07,3;UBERON:0004872,2.66e-07,33;UBERON:0002394,5.73e-07,1;UBERON:0001281,5.73e-07,1;UBERON:0000353,5.73e-07,1;UBERON:0003497,5.73e-07,1;UBERON:0003909,5.73e-07,1;UBERON:0003928,5.73e-07,1;UBERON:0003835,5.73e-07,1;UBERON:0003513,5.73e-07,1;UBERON:0001280,5.73e-07,1;UBERON:0004647,5.73e-07,1;UBERON:0002294,5.73e-07,1;UBERON:0001173,5.73e-07,1;UBERON:0004912,5.73e-07,1;UBERON:0005171,5.73e-07,1;UBERON:0003103,6.64e-07,43 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0.307213066512487,0,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0.226714680320357,2.89864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.432982082022428,1.52015919285059,1.01104889002957,0.22836775943812,0,0,0,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0.741584903203122,0.144599356919912,0,0.485300549842228,0,0,0,0.585561594023094,0.83778682725382,0,1.07833612055328,0.599902730993408,0.381210681219194,0.299581278809645,0,0.125654352112864,0,0,0,0.162241263067758,0.509196819251581,0.373220911830279,0,0,0.390361328888111,0.689706313300419,0,0.753524089178575,0.476255494059295,0.896796041993948,0.468508622798644,0,0.215567992932842,0.378212160335639,0.703804496655795,0.43839146485515,0.834141747676794,0.696504333044333,1.02891068203972,0.398068533636986,0,0.257347907114715,0.284163499395593,0.414251545071004,1.64168241986767,1.62055855314913,0.473489471170421,1.77087808572663,2.1597395804233,1.86027155800326,0.536546802799238,1.05088808130453,0.329119699826961,0.32833492815819,0.648550476366846,0.146199987425332,0.878200461164203,0.268412837520744,0.210289948564127,0,0,0,0,0.232236671860439,0,0,0,0,0.949058123089023,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0.184753190166605,0.568474235311454,0.488894929326078,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0,0,0.117211686592203,0,0.252470927204373,0.631016438832513,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0,0.292255857911312,0,0,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0.42366414172764,0.220528398054962,0.65954501176592,0.322928853391811,0.301564624640779,0.716234064018819,0.820704498725306,0.291480836629851,0.18542530201051,0,0,0,0.188368457004691,0,0,2.71965487990169,2.6590775941495,1.38199973804424,0,0.158167996790568,0,0.324016022465404,0.627264888043406,0,0.539457385539283,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.938857909166032,0.5208175393758,0.419437377702843,0,0.288030006257865,0,0.405450430580328,0.616265742988964,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.563047426353546,0,0.428736758158132,0,0,0,0,0.515559547031063,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0.754505365544305,0.37456602987953,0.256100609619477,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.685738504770831,0.354951612318675,0.476872379894642,0.436039249896986,0,0.25384382367503,0.365855945745545,0.789209134313529,0.271608227691724,1.12228454331548,0.237270036248348,0.591026894253381,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p@chr6:53571193..53571200,+ | |||
}} |
Latest revision as of 23:08, 5 August 2015
Short description: | p@chr6:53571193..53571200, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:53571193..53571200, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.19e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.19e-07 | 3 |
branched duct epithelial cell | 1.19e-07 | 3 |
epithelial cell of lower respiratory tract | 1.19e-07 | 3 |
respiratory epithelial cell | 1.19e-07 | 3 |
tracheal epithelial cell | 1.19e-07 | 3 |
tracheoblast | 1.19e-07 | 3 |
lining cell | 5.73e-07 | 1 |
meso-epithelial cell | 5.73e-07 | 1 |
endothelial cell | 5.73e-07 | 1 |
endothelial cell of sinusoid | 5.73e-07 | 1 |
endothelial cell of hepatic sinusoid | 5.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 8.70e-11 | 23 |
circulatory system | 8.70e-11 | 23 |
primary circulatory organ | 2.89e-10 | 18 |
heart | 2.89e-10 | 18 |
primitive heart tube | 2.89e-10 | 18 |
primary heart field | 2.89e-10 | 18 |
anterior lateral plate mesoderm | 2.89e-10 | 18 |
heart tube | 2.89e-10 | 18 |
heart primordium | 2.89e-10 | 18 |
cardiac mesoderm | 2.89e-10 | 18 |
cardiogenic plate | 2.89e-10 | 18 |
heart rudiment | 2.89e-10 | 18 |
trachea | 1.19e-07 | 3 |
respiratory airway | 1.19e-07 | 3 |
tracheobronchial tree | 1.19e-07 | 3 |
lower respiratory tract | 1.19e-07 | 3 |
splanchnic layer of lateral plate mesoderm | 2.66e-07 | 33 |
bile duct | 5.73e-07 | 1 |
hepatic sinusoid | 5.73e-07 | 1 |
parenchyma | 5.73e-07 | 1 |
abdomen blood vessel | 5.73e-07 | 1 |
sinusoid | 5.73e-07 | 1 |
digestive system duct | 5.73e-07 | 1 |
abdominal segment blood vessel | 5.73e-07 | 1 |
trunk blood vessel | 5.73e-07 | 1 |
liver parenchyma | 5.73e-07 | 1 |
liver lobule | 5.73e-07 | 1 |
biliary system | 5.73e-07 | 1 |
biliary tree | 5.73e-07 | 1 |
biliary bud | 5.73e-07 | 1 |
hepatic duct | 5.73e-07 | 1 |
compound organ | 6.64e-07 | 43 |