FFCP PHASE1:Mm9::chr6:67505573..67505589,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=18|UniProt=|association_with_transcript=-40bp_to_ENSMUST00000103302,uc012enb.1_5end|description=CAGE_peak_2_at_ENSMUST00000103302_5end,CAGE_peak_2_at_uc012enb.1_5end|id=chr6:67505573..67505589,+|ontology_enrichment_celltype=CL:0000553!7.61e-13!6;CL:0000556!7.61e-13!6;CL:0000050!2.01e-08!9;CL:0000414!8.20e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,1.07e-33,6;CL:0000556,1.07e-33,6;CL:0000050,1.53e-22,9;CL:0000839,1.18e-15,13;CL:0000763,9.78e-13,16;CL:0002027,1.55e-11,3;CL:0002006,1.55e-11,3;CL:0002024,1.55e-11,3;CL:0002031,1.56e-11,25;CL:0000049,9.83e-11,19;CL:0000945,1.73e-09,1;CL:0000236,1.73e-09,1;CL:0000826,1.73e-09,1;CL:0000988,5.76e-09,32;CL:0002032,5.76e-09,32;CL:0000037,5.76e-09,32;CL:0000837,5.76e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!5.01e-11!6;UBERON:0004457!5.01e-11!6;UBERON:0000042!5.01e-11!6;UBERON:0004854!5.01e-11!6;UBERON:0009034!5.01e-11!6;UBERON:0002095!5.01e-11!6;UBERON:0004782!5.01e-11!6;UBERON:0003281!5.01e-11!6;UBERON:0009664!5.01e-11!6;UBERON:0002296!5.01e-11!6;UBERON:0005602!5.01e-11!6;UBERON:0001179!5.01e-11!6;UBERON:0006293!5.01e-11!6;UBERON:0002193!2.94e-10!48;UBERON:0002465!1.05e-09!3;UBERON:0004923!1.65e-09!24;UBERON:0007023!7.71e-08!51;UBERON:0001962!7.14e-07!2;UBERON:0001961!7.14e-07!2;UBERON:0001744!7.14e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.03e-13,48;UBERON:0002405,6.03e-13,48;UBERON:0002371,9.78e-13,16;UBERON:0002465,1.07e-11,3;UBERON:0000029,1.44e-09,1;UBERON:0001097,1.44e-09,1;UBERON:0003968,1.44e-09,1;UBERON:0001467,1.44e-09,1;UBERON:0001474,2.84e-09,22;UBERON:0004765,2.84e-09,22;UBERON:0001434,2.84e-09,22;UBERON:0003199,3.65e-09,1;UBERON:0002390,2.23e-08,45;UBERON:0003061,2.23e-08,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,4.656931149966,0,7.25562980323947,9.04955261797876,4.2438965179803,0.255129870453209,0,0,0.95995453676044,3.44113921600755,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36904339384756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,5.95557132388495,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,4.27177201994632,0,0.185194527369712,0.188368457004691,0.136694227721025,1.14389086603261,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@ENSMUST00000103302,p2@uc012enb.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-40bp_to_ENSMUST00000103302,uc012enb.1_5end | |||
|cluster_id=chr6:67505573..67505589,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000103302_5end,CAGE_peak_2_at_uc012enb.1_5end | |||
|id=chr6:67505573..67505589,+ | |||
|ontology_enrichment_celltype=CL:0000553!7.61e-13!6;CL:0000556!7.61e-13!6;CL:0000050!2.01e-08!9;CL:0000414!8.20e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.07e-33,6;CL:0000556,1.07e-33,6;CL:0000050,1.53e-22,9;CL:0000839,1.18e-15,13;CL:0000763,9.78e-13,16;CL:0002027,1.55e-11,3;CL:0002006,1.55e-11,3;CL:0002024,1.55e-11,3;CL:0002031,1.56e-11,25;CL:0000049,9.83e-11,19;CL:0000945,1.73e-09,1;CL:0000236,1.73e-09,1;CL:0000826,1.73e-09,1;CL:0000988,5.76e-09,32;CL:0002032,5.76e-09,32;CL:0000037,5.76e-09,32;CL:0000837,5.76e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!5.01e-11!6;UBERON:0004457!5.01e-11!6;UBERON:0000042!5.01e-11!6;UBERON:0004854!5.01e-11!6;UBERON:0009034!5.01e-11!6;UBERON:0002095!5.01e-11!6;UBERON:0004782!5.01e-11!6;UBERON:0003281!5.01e-11!6;UBERON:0009664!5.01e-11!6;UBERON:0002296!5.01e-11!6;UBERON:0005602!5.01e-11!6;UBERON:0001179!5.01e-11!6;UBERON:0006293!5.01e-11!6;UBERON:0002193!2.94e-10!48;UBERON:0002465!1.05e-09!3;UBERON:0004923!1.65e-09!24;UBERON:0007023!7.71e-08!51;UBERON:0001962!7.14e-07!2;UBERON:0001961!7.14e-07!2;UBERON:0001744!7.14e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.03e-13,48;UBERON:0002405,6.03e-13,48;UBERON:0002371,9.78e-13,16;UBERON:0002465,1.07e-11,3;UBERON:0000029,1.44e-09,1;UBERON:0001097,1.44e-09,1;UBERON:0003968,1.44e-09,1;UBERON:0001467,1.44e-09,1;UBERON:0001474,2.84e-09,22;UBERON:0004765,2.84e-09,22;UBERON:0001434,2.84e-09,22;UBERON:0003199,3.65e-09,1;UBERON:0002390,2.23e-08,45;UBERON:0003061,2.23e-08,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,4.656931149966,0,7.25562980323947,9.04955261797876,4.2438965179803,0.255129870453209,0,0,0.95995453676044,3.44113921600755,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36904339384756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,5.95557132388495,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,4.27177201994632,0,0.185194527369712,0.188368457004691,0.136694227721025,1.14389086603261,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENSMUST00000103302,p2@uc012enb.1 | |||
}} |
Latest revision as of 01:12, 6 August 2015
Short description: | p2@ENSMUST00000103302, p2@uc012enb.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000103302_5end, CAGE_peak_2_at_uc012enb.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -40bp_to_ENSMUST00000103302, uc012enb.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.07e-33 | 6 |
megakaryocyte | 1.07e-33 | 6 |
megakaryocyte-erythroid progenitor cell | 1.53e-22 | 9 |
myeloid lineage restricted progenitor cell | 1.18e-15 | 13 |
myeloid cell | 9.78e-13 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 1.55e-11 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.55e-11 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.55e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 1.56e-11 | 25 |
common myeloid progenitor | 9.83e-11 | 19 |
lymphocyte of B lineage | 1.73e-09 | 1 |
B cell | 1.73e-09 | 1 |
pro-B cell | 1.73e-09 | 1 |
hematopoietic cell | 5.76e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.76e-09 | 32 |
hematopoietic stem cell | 5.76e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.76e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.03e-13 | 48 |
immune system | 6.03e-13 | 48 |
bone marrow | 9.78e-13 | 16 |
lymphoid system | 1.07e-11 | 3 |
lymph node | 1.44e-09 | 1 |
axillary lymph node | 1.44e-09 | 1 |
peripheral lymph node | 1.44e-09 | 1 |
shoulder | 1.44e-09 | 1 |
bone element | 2.84e-09 | 22 |
skeletal element | 2.84e-09 | 22 |
skeletal system | 2.84e-09 | 22 |
egg chamber | 3.65e-09 | 1 |
hematopoietic system | 2.23e-08 | 45 |
blood island | 2.23e-08 | 45 |