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FFCP PHASE1:Mm9::chr8:108160409..108160489,+: Difference between revisions

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{{FFCP|EntrezGene=13018|HGNC=|MCL_coexpression_id=973|UniProt=Q61164|association_with_transcript=0bp_to_ENSMUST00000005841,ENSMUST00000132679,NM_181322,uc009ndm.2_5end|description=CAGE_peak_1_at_Ctcf_5end|id=chr8:108160409..108160489,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.03e-12!29;UBERON:0002390!7.61e-10!45;UBERON:0003061!7.61e-10!45;UBERON:0002370!2.08e-09!23;UBERON:0000974!2.08e-09!23;UBERON:0004807!2.08e-09!23;UBERON:0005058!2.08e-09!23;UBERON:0003351!2.08e-09!23;UBERON:0009113!2.08e-09!23;UBERON:0003295!2.08e-09!23;UBERON:0009722!2.08e-09!23;UBERON:0005562!2.08e-09!23;UBERON:0007690!2.08e-09!23;UBERON:0002193!2.42e-09!48;UBERON:0003408!6.68e-09!24;UBERON:0006562!9.46e-09!24;UBERON:0001557!9.46e-09!24;UBERON:0001042!9.46e-09!24;UBERON:0008814!9.46e-09!24;UBERON:0009145!9.46e-09!24;UBERON:0000065!2.26e-08!41;UBERON:0001004!4.42e-08!42;UBERON:0000072!2.42e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.03e-12,29;UBERON:0005057,2.03e-12,29;UBERON:0002390,7.61e-10,45;UBERON:0003061,7.61e-10,45;UBERON:0002370,2.08e-09,23;UBERON:0000974,2.08e-09,23;UBERON:0004807,2.08e-09,23;UBERON:0005058,2.08e-09,23;UBERON:0003351,2.08e-09,23;UBERON:0009113,2.08e-09,23;UBERON:0003295,2.08e-09,23;UBERON:0009722,2.08e-09,23;UBERON:0005562,2.08e-09,23;UBERON:0007690,2.08e-09,23;UBERON:0000153,2.18e-09,43;UBERON:0002193,2.42e-09,48;UBERON:0002405,2.42e-09,48;UBERON:0003408,6.68e-09,24;UBERON:0006562,9.46e-09,24;UBERON:0001557,9.46e-09,24;UBERON:0001042,9.46e-09,24;UBERON:0008814,9.46e-09,24;UBERON:0009145,9.46e-09,24;UBERON:0000077,1.08e-08,35;UBERON:0007811,1.22e-08,36;UBERON:0000065,2.26e-08,41;UBERON:0001004,4.42e-08,42;UBERON:0000072,2.42e-07,27|phase1_expression=40.5176583175129,36.9913932097723,38.6749353481106,42.3449895829562,38.5689712058687,39.9552667150298,44.8536269943409,80.443830504102,53.3589256954817,51.0260667381946,54.9609678003871,51.6125868699827,92.1059927029887,84.0110067246565,106.595123781012,128.36931952515,152.504489431936,85.4902468120824,92.8264715510851,75.1169683682513,30.9557576149894,52.0284584292639,54.0683563517596,41.5980299262857,38.7701685003517,30.4342940980961,29.7225777349762,28.4422027145374,37.0545667939929,38.8126399830293,28.8249663851896,27.9413496322238,25.2176562909674,47.5445043046316,40.4392267651784,39.8963148860382,38.7921776898501,65.2909343949576,47.6614560159518,64.3934205087772,50.5879079706672,68.3045484958446,59.2322630698007,27.0678158647491,25.6483635985372,22.5762505158868,10.9534788208725,13.5175596955877,13.4008571468028,13.8045228342741,27.017379373695,8.62515386189829,115.769998179838,108.07895915969,98.4754831487419,28.0412785279182,30.659078073447,26.2992767061496,62.9204193273349,59.2469896784677,59.5801519295808,9.14880236586657,16.0073063300005,8.54904731417329,17.7995945262055,14.9200824138681,7.78960287347852,14.9845139075406,79.2188638036769,84.1086995806433,75.0860112024434,21.9951257990929,28.2711732418065,79.2515470920753,85.7816965613216,104.790941673542,70.4741638396088,49.4149998389676,51.9190082406103,64.7561672755252,63.7668875908795,78.137005583514,33.2227768811643,28.138130501584,40.3387374130779,61.8720029494702,55.9520705540475,57.038230422542,26.8070724399472,37.9369231736063,56.5235752968272,26.673140186423,29.2387673494333,30.7630819233556,32.4888208723835,30.4658283226188,41.5715483589985,38.8581135477972,32.7330365799615,32.8605804294616,34.7883246848401,50.047326191584,173.267563000519,227.541345009066,50.8753946376353,44.3379764581423,40.9474800461974,40.7636450597044,150.701848282654,35.9229976536876,45.973611593026,45.6698217468212,40.3577120198102,33.9125941243401,45.0364748329749,37.4486442162433,40.0455847729686,45.1149993590124,82.2687813313383,51.6036251332235,77.0736899426773,96.4901753739092,50.325775528893,72.0240760648406,65.5568192326114,38.5740153364973,64.1010916106673,55.1910512513935,48.9220374231299,39.694519442278,44.8350590762254,66.8481153240439,50.5828771759525,45.0059204901382,41.557608911912,47.2122075527175,53.6693447491167,71.4096011301934,32.601235837944,45.2449990155919,69.0939552131957,52.1877777063984,68.063485066422,68.2692824795789,74.7721125673093,86.3486474719888,73.7432572285066,61.3126988651467,78.8978854134203,71.4820983034357,55.9524574841357,45.373516612508,61.1703948296315,58.506363975724,58.8536910126718,59.9093143123664,54.0704154231191,57.1312353794668,52.286083888789,40.8037771894939,54.1755198556332,56.5394872987587,42.1405629341674,54.8972206575257,47.8228049950873,49.0646623423361,53.1181334771246,45.4217181808289,47.5577966249959,45.1460526217512,44.1014323929455,42.3979963533464,44.5686734040833,38.5172421842267,48.7872680668775,60.3021028542607,40.6415103070072,44.4276951994754,69.7452579250215,63.6328480897602,57.4748877496536,49.2107800080956,39.8056698482318,39.7571558575249,37.9623249235609,38.3748564506945,43.7323263312469,35.8121649674071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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13018
|HGNC=
|MCL_coexpression_id=973
|TSSclassifier=NA
|UniProt=Q61164
|association_with_transcript=0bp_to_ENSMUST00000005841,ENSMUST00000132679,NM_181322,uc009ndm.2_5end
|cluster_id=chr8:108160409..108160489,+
|description=CAGE_peak_1_at_Ctcf_5end
|id=chr8:108160409..108160489,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.03e-12,29;UBERON:0005057,2.03e-12,29;UBERON:0002390,7.61e-10,45;UBERON:0003061,7.61e-10,45;UBERON:0002370,2.08e-09,23;UBERON:0000974,2.08e-09,23;UBERON:0004807,2.08e-09,23;UBERON:0005058,2.08e-09,23;UBERON:0003351,2.08e-09,23;UBERON:0009113,2.08e-09,23;UBERON:0003295,2.08e-09,23;UBERON:0009722,2.08e-09,23;UBERON:0005562,2.08e-09,23;UBERON:0007690,2.08e-09,23;UBERON:0000153,2.18e-09,43;UBERON:0002193,2.42e-09,48;UBERON:0002405,2.42e-09,48;UBERON:0003408,6.68e-09,24;UBERON:0006562,9.46e-09,24;UBERON:0001557,9.46e-09,24;UBERON:0001042,9.46e-09,24;UBERON:0008814,9.46e-09,24;UBERON:0009145,9.46e-09,24;UBERON:0000077,1.08e-08,35;UBERON:0007811,1.22e-08,36;UBERON:0000065,2.26e-08,41;UBERON:0001004,4.42e-08,42;UBERON:0000072,2.42e-07,27
|phase1_expression=40.5176583175129,36.9913932097723,38.6749353481106,42.3449895829562,38.5689712058687,39.9552667150298,44.8536269943409,80.443830504102,53.3589256954817,51.0260667381946,54.9609678003871,51.6125868699827,92.1059927029887,84.0110067246565,106.595123781012,128.36931952515,152.504489431936,85.4902468120824,92.8264715510851,75.1169683682513,30.9557576149894,52.0284584292639,54.0683563517596,41.5980299262857,38.7701685003517,30.4342940980961,29.7225777349762,28.4422027145374,37.0545667939929,38.8126399830293,28.8249663851896,27.9413496322238,25.2176562909674,47.5445043046316,40.4392267651784,39.8963148860382,38.7921776898501,65.2909343949576,47.6614560159518,64.3934205087772,50.5879079706672,68.3045484958446,59.2322630698007,27.0678158647491,25.6483635985372,22.5762505158868,10.9534788208725,13.5175596955877,13.4008571468028,13.8045228342741,27.017379373695,8.62515386189829,115.769998179838,108.07895915969,98.4754831487419,28.0412785279182,30.659078073447,26.2992767061496,62.9204193273349,59.2469896784677,59.5801519295808,9.14880236586657,16.0073063300005,8.54904731417329,17.7995945262055,14.9200824138681,7.78960287347852,14.9845139075406,79.2188638036769,84.1086995806433,75.0860112024434,21.9951257990929,28.2711732418065,79.2515470920753,85.7816965613216,104.790941673542,70.4741638396088,49.4149998389676,51.9190082406103,64.7561672755252,63.7668875908795,78.137005583514,33.2227768811643,28.138130501584,40.3387374130779,61.8720029494702,55.9520705540475,57.038230422542,26.8070724399472,37.9369231736063,56.5235752968272,26.673140186423,29.2387673494333,30.7630819233556,32.4888208723835,30.4658283226188,41.5715483589985,38.8581135477972,32.7330365799615,32.8605804294616,34.7883246848401,50.047326191584,173.267563000519,227.541345009066,50.8753946376353,44.3379764581423,40.9474800461974,40.7636450597044,150.701848282654,35.9229976536876,45.973611593026,45.6698217468212,40.3577120198102,33.9125941243401,45.0364748329749,37.4486442162433,40.0455847729686,45.1149993590124,82.2687813313383,51.6036251332235,77.0736899426773,96.4901753739092,50.325775528893,72.0240760648406,65.5568192326114,38.5740153364973,64.1010916106673,55.1910512513935,48.9220374231299,39.694519442278,44.8350590762254,66.8481153240439,50.5828771759525,45.0059204901382,41.557608911912,47.2122075527175,53.6693447491167,71.4096011301934,32.601235837944,45.2449990155919,69.0939552131957,52.1877777063984,68.063485066422,68.2692824795789,74.7721125673093,86.3486474719888,73.7432572285066,61.3126988651467,78.8978854134203,71.4820983034357,55.9524574841357,45.373516612508,61.1703948296315,58.506363975724,58.8536910126718,59.9093143123664,54.0704154231191,57.1312353794668,52.286083888789,40.8037771894939,54.1755198556332,56.5394872987587,42.1405629341674,54.8972206575257,47.8228049950873,49.0646623423361,53.1181334771246,45.4217181808289,47.5577966249959,45.1460526217512,44.1014323929455,42.3979963533464,44.5686734040833,38.5172421842267,48.7872680668775,60.3021028542607,40.6415103070072,44.4276951994754,69.7452579250215,63.6328480897602,57.4748877496536,49.2107800080956,39.8056698482318,39.7571558575249,37.9623249235609,38.3748564506945,43.7323263312469,35.8121649674071,45.0367041245168,39.5480539807857,39.3371250771944,44.6076452089783,49.3136542478012,71.4053203810805,65.3704866903866,67.0012868611084,58.9615560989582,54.2149887752162,47.7435855288143,39.8547399544926,42.2326577893298,33.9342200784951,33.795599487935,75.7476779951067,60.9332884850929,74.6542213117714,81.7526289195667,69.9413763282009,52.4529254669725,53.5114815658508,45.884269177335,52.1666685057355,70.4464211984037,36.4698128715133,38.0685961199764,40.9177782274321,33.3679189150757,25.0870631108951,58.5667612828137,50.5942069427194,66.0008154590205,79.1012099712377,80.2640649146677,60.6372651939373,50.4652518678349,45.2710063030093,64.6304090835383,60.4598602741156,62.6657240823924,60.9571530742545,53.3596593965617,50.9164686206921,96.5064217211342,42.4246433378593,35.8987919303896,42.2183221846241,40.9404004468869,38.679856575427,40.1640616172855,37.8706390806559,48.2727575706873,44.5100168498168,49.5473814785438,56.1576675188497,53.9172791279394,67.3722143277421,54.2446340244358,47.0531931237212,58.107303358139,66.1921911828922,42.2981453920641,47.1873849718226,56.8475488143981,54.2751704579642,42.4784442687881,65.30799112569,49.8833868991839,55.2612883684781,37.5033403958581,41.8111801203741,44.449666424934,53.0759245037158,50.9791251090152,50.5658812697306,43.2216295157495,38.1601510018291,36.7674774214091,73.4649263647746,50.061810623926,51.012214337519,52.8473896253975,42.2734097716907,45.9091767479918,35.3179340972935,38.2514884143848,34.7404596216665,33.5203165043542,108.989813194318,57.3198714770465,69.7820541418763,58.4924485615369,64.0149509005739,43.4306446578478,36.7142097980809,98.4216273395631,63.979929068599,84.6338990079582,131.481182989274,124.801829909296,106.381850541033,60.0023857878309,59.0595128805837,51.1339903076368,37.2321541025894,64.0580387001799,63.8423126778305,56.0547718865149,58.7538111800657,48.9132142791438,47.4722499274569,45.4594006489348,29.8401773861794,39.0141069608297,45.9791091684325,23.1114104860518,64.4416313449549,51.1266735512432,58.7242588799024,57.4761214475903,55.586565286466,61.9646220049581,54.1650240950832,51.5907974574497,33.0970245531628,27.6508806007551,147.261182212731,54.1276324824738,65.2214577996653,94.5823591278348,120.84301957555,121.394307771353,119.113690474289,129.523715332104,151.55064137217,146.393275584255,139.745092599661,163.339408119825,137.101874337469,152.758111151311,42.6253121196597,59.2702495508753,81.9087510844513,55.56980801651,41.9221419049853,40.1640497465529,45.7879060668163,48.2328852927898,40.6273404268644,50.2629139929189,44.191222704689,44.6858500482729,57.3989629027917,55.491684101422,47.5898155355511,47.9265975164582,50.8862959643369,57.549085940994,46.080667745912,101.815387980077,72.6225269589876,58.2201595621598,59.8042523988003,59.739751348975,65.632132516655,50.6722539387683,61.1924119999516,53.914427211425,50.5394423527595,57.2863217751942,60.1718029021583,62.3652439749417,54.9976059157827,51.9216639358744,68.1099978534795,55.0450548238064,53.2429448479826,53.1590812036265,59.1739658940277,64.8022887008435,57.5021611956253,63.6624627159347,60.609455735681,62.7709567370255,57.1994749347733,62.3784387496154,55.5077091133848,57.5809442706454,58.9199385240625,54.4534733189959,56.0490504716956,67.5231221229987,59.4957470154109,48.9982791892099,39.7198818921334,46.0845268637455,40.3957581610801,43.2311630475586,38.3829069267957,43.1274174253984
|short_description=p1@Ctcf
}}

Latest revision as of 07:32, 27 September 2015

Short description:p1@Ctcf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ctcf_5end
Coexpression cluster:MCL_coexpression_mm9:973
Association with transcript: 0bp_to_ENSMUST00000005841, ENSMUST00000132679, NM_181322, uc009ndm.2_5end
EntrezGene:Ctcf
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ctcf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G740.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I536.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I638.67
CD326+ enterocyte, pool1.CNhs13542.11848-124I342.34
CD326+ enterocyte, pool2.CNhs13197.11849-124I438.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I739.96
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I844.85
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E980.44
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E753.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F251.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E654.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F151.61
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E492.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E884.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1106.60
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3128.37
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5152.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A285.49
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A492.83
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A675.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A330.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H252.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I954.07
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D141.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D238.77
GP2+ M cell, pool1.CNhs13228.11845-124H930.43
GP2+ M cell, pool2.CNhs13231.11846-124I129.72
GP2+ M cell, pool3.CNhs13240.11847-124I228.44
Ileum epithelium, pool1.CNhs13199.10252-104B937.05
Ileum epithelium, pool2.CNhs13232.10253-104C138.81
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C828.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I327.94
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G625.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F540.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F639.90
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F738.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G865.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H147.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H364.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G950.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H268.30
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H459.23
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D827.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D925.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B322.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.52
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.40
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C427.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2115.77
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9108.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A198.48
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C128.04
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E130.66
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C526.30
Mouse Granule cells, donor1.CNhs12131.11713-123C362.92
Mouse Granule cells, donor2.CNhs12357.11731-123E359.25
Mouse Granule cells, donor3.CNhs12108.11636-122C759.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.15
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E717.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.92
Mouse Microglia, donor1.CNhs12629.11718-123C87.79
Mouse Microglia, donor2.CNhs12634.11736-123E814.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D579.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F584.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D975.09
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D528.27
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D279.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F285.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6104.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D370.47
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F349.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D751.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D464.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F463.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D878.14
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E433.22
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.34
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D661.87
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F655.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E157.04
Mouse Schwann, donor1.CNhs12507.11728-123D926.81
Mouse Schwann, donor2.CNhs12573.11746-123F937.94
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G356.52
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F726.67
Mouse hepatocyte, donor1.CNhs13078.11714-123C429.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C830.76
Mouse hepatocyte, donor6.CNhs13090.11822-124F432.49
Mouse hepatocyte, donor8.CNhs13091.11824-124F630.47
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A741.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I738.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E332.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I832.86
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G634.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H150.05
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8173.27
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6227.54
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G150.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G244.34
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G340.95
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B640.76
accessory axillary lymph node, adult.CNhs10475.1063-29H9150.70
adrenal gland, adult.CNhs10508.49-24D735.92
adrenal gland, embryo E14.CNhs11038.406-44C545.97
adrenal gland, embryo E16.CNhs11004.1254-43D645.67
adrenal gland, embryo E17.CNhs11043.1263-45I140.36
adrenal gland, embryo E18.CNhs11026.1262-18F533.91
adrenal gland, neonate N00.CNhs11191.1311-23C145.04
adrenal gland, neonate N25.CNhs11223.1377-27I337.45
amnion, adult pregnant day17.5.CNhs10488.583-22A840.05
aorta, adult.CNhs10498.46-23H145.11
bone (os femoris), adult.CNhs10483.56-12G282.27
bone (os femoris), neonate N02.CNhs11227.1985-43F551.60
bone (os femoris), neonate N16.CNhs11225.1525-43A677.07
bone (os femoris), neonate N20.CNhs11195.1350-25C396.49
cecum, adult.CNhs10467.37-13H450.33
cerebellum, adult.CNhs10494.15-8B272.02
cerebellum, neonate N30.CNhs11135.1395-42I265.56
colon, adult.CNhs10468.36-18H738.57
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C764.10
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D155.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D448.92
corpora quadrigemina, adult.CNhs10501.16-22A439.69
corpus striatum, adult.CNhs10487.19-21D844.84
corpus striatum, neonate N00.CNhs11226.630-43F166.85
cortex, adult.CNhs10473.12-14D550.58
cortex, neonate N30.CNhs11107.1392-42F245.01
diencephalon, adult.CNhs10482.20-12F241.56
diencephalon, neonate N30.CNhs11201.1388-42B247.21
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B153.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A271.41
epididymis, adult.CNhs10490.58-23B232.60
eyeball, adult.CNhs10484.31-12G445.24
eyeball, embryo E12.CNhs11016.345-16C669.09
eyeball, embryo E14.CNhs10521.399-16E252.19
eyeball, embryo E15.CNhs10593.426-16C968.06
eyeball, embryo E17.CNhs11023.1261-18D468.27
eyeball, neonate N00.CNhs11207.633-15C674.77
eyeball, neonate N01.CNhs11140.1532-43E786.35
eyeball, neonate N02.CNhs11205.1551-44G873.74
eyeball, neonate N16.CNhs11188.777-19A261.31
forelimb, embryo E11.CNhs10596.335-25E278.90
forelimb, embryo E12.CNhs10600.359-14H271.48
forelimb, embryo E13.CNhs10589.384-1E255.95
forelimb, embryo E14.CNhs10577.413-26A845.37
forelimb, embryo E15.CNhs11007.437-20E761.17
forelimb, embryo E17.CNhs10598.1517-43C458.51
forelimb, embryo E18.CNhs11008.1520-43B558.85
gonad, embryo E13.CNhs11044.1564-45I659.91
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C854.07
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D257.13
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D552.29
heart, embryo E11.CNhs10586.331-24E940.80
heart, embryo E12.CNhs11015.353-12F554.18
heart, embryo E13.CNhs11013.376-3I956.54
heart, embryo E14.CNhs10597.403-26D442.14
heart, embryo E15.CNhs11017.431-16C854.90
heart, embryo E16.CNhs11021.457-17C647.82
heart, embryo E17.CNhs11025.479-18E549.06
heart, embryo E18.CNhs11030.1283-20G353.12
heart, neonate N00.CNhs11213.639-21E345.42
heart, neonate N03.CNhs11221.1349-25I247.56
heart, neonate N10.CNhs11118.749-24G145.15
heart, neonate N16.CNhs11209.782-15G144.10
heart, neonate N20.CNhs11127.821-26I642.40
heart, neonate N25.CNhs11196.1351-25D344.57
heart, neonate N30.CNhs11202.1390-42D238.52
hippocampus, adult.CNhs10478.13-16E848.79
hippocampus, neonate N00.CNhs11228.627-43G160.30
intestinal mucosa, adult.CNhs10506.860-29I340.64
intestine, adult.CNhs10496.178-9A344.43
intestine, embryo E12.CNhs11019.1251-16I569.75
intestine, embryo E13.CNhs11010.381-16D563.63
intestine, embryo E15.CNhs10602.976-16D857.47
intestine, embryo E16.CNhs10585.463-22H449.21
intestine, embryo E17.CNhs10582.482-18D339.81
intestine, embryo E18.CNhs10526.1289-20F739.76
intestine, neonate N00.CNhs11126.644-26D137.96
intestine, neonate N01.CNhs11192.1322-23E938.37
intestine, neonate N06.CNhs11102.688-20B843.73
intestine, neonate N07.CNhs11095.720-20F235.81
intestine, neonate N10.CNhs11098.755-23A545.04
intestine, neonate N20.CNhs11187.827-18D139.55
intestine, neonate N25.CNhs11121.1352-25E339.34
intestine, neonate N30.CNhs11131.1384-42G144.61
kidney, embryo E14.CNhs10606.411-4I949.31
kidney, embryo E15.CNhs10997.434-16F871.41
kidney, embryo E16.CNhs10584.464-22A565.37
kidney, embryo E17.CNhs11028.483-18I267.00
kidney, embryo E18.CNhs11001.1288-20C758.96
kidney, neonate N00.CNhs11214.646-21G754.21
kidney, neonate N10.CNhs11206.758-6D547.74
kidney, neonate N20.CNhs11113.832-19I139.85
kidney, neonate N25.CNhs11122.1353-25F342.23
kidney, neonate N30.CNhs11203.1385-42H133.93
liver, adult pregnant day01.CNhs10466.508-5B233.80
liver, embryo E12.CNhs10601.355-15F875.75
liver, embryo E13.CNhs10524.378-3H660.93
liver, embryo E14.CNhs10594.409-16E174.65
liver, embryo E15.CNhs10520.433-16D781.75
liver, embryo E16.CNhs10523.462-17F569.94
liver, embryo E17.CNhs10510.481-18A352.45
liver, embryo E18.CNhs10579.499-43G453.51
liver, neonate N00.CNhs11117.641-24F445.88
liver, neonate N03.CNhs11123.1345-25G252.17
liver, neonate N06.CNhs11101.684-20A870.45
liver, neonate N07.CNhs11103.716-20H236.47
liver, neonate N10.CNhs11115.751-24B938.07
liver, neonate N20.CNhs11220.823-25A340.92
liver, neonate N25.CNhs11198.1368-26H133.37
liver, neonate N30.CNhs11106.1382-42D125.09
lung, adult.CNhs10474.28-22B158.57
lung, embryo E12.CNhs10522.354-16G250.59
lung, embryo E14.CNhs10604.404-26F866.00
lung, embryo E15.CNhs11020.432-17C579.10
lung, embryo E16.CNhs10998.458-17B680.26
lung, embryo E17.CNhs10605.480-44A660.64
lung, embryo E18.CNhs10583.1287-20I650.47
lung, neonate N00.CNhs11224.640-42C645.27
lung, neonate N06.CNhs11212.683-20E564.63
lung, neonate N07.CNhs11111.715-19A360.46
lung, neonate N10.CNhs11219.750-23E662.67
lung, neonate N20.CNhs11109.822-18A460.96
lung, neonate N25.CNhs11119.1359-25C753.36
lung, neonate N30.CNhs11133.1394-42H250.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A196.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A142.42
mammary gland, adult lactating day02.CNhs10480.595-22B635.90
mammary gland, adult pregnant day19.CNhs10476.588-5H242.22
medulla oblongata, adult.CNhs10477.17-12C240.94
medulla oblongata, neonate N30.CNhs11200.1396-42A338.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C740.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C237.87
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E148.27
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E244.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E349.55
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D756.16
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D853.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D967.37
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D454.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D547.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D658.11
olfactory brain, adult.CNhs10489.18-22I966.19
ovary, adult.CNhs10507.91-2I742.30
ovary, embryo E18.CNhs11040.505-44H747.19
ovary, neonate N00.CNhs11217.1299-22I456.85
oviduct, adult pregnant day01.CNhs10500.988-6G654.28
pancreas, adult.CNhs10486.34-16E442.48
pancreas, embryo E14.CNhs11012.405-44F465.31
pancreas, embryo E15.CNhs11042.1556-45F249.88
pancreas, embryo E16.CNhs11003.460-26E555.26
pancreas, embryo E17.CNhs10599.1558-45G337.50
pancreas, embryo E18.CNhs10580.1535-43I741.81
pancreas, neonate N00.CNhs11105.645-26G944.45
pancreas, neonate N01.CNhs11138.1531-43D753.08
pancreas, neonate N02.CNhs11139.1539-43D850.98
pancreas, neonate N16.CNhs11136.787-43B650.57
pancreas, neonate N25.CNhs11094.1555-45E243.22
pancreas, neonate N30.CNhs11182.1548-44H538.16
pituitary gland, adult.CNhs10493.21-1G836.77
pituitary gland, embryo E12.CNhs11018.346-16E673.46
pituitary gland, embryo E13.CNhs11009.370-44C750.06
pituitary gland, embryo E14.CNhs11037.398-44A551.01
pituitary gland, embryo E15.CNhs10592.427-16B952.85
pituitary gland, embryo E16.CNhs11036.449-43F642.27
pituitary gland, embryo E17.CNhs11039.1265-44F545.91
pituitary gland, neonate N00.CNhs11190.1308-22E935.32
placenta, adult pregnant day10.CNhs10472.539-13I738.25
placenta, adult pregnant day17.CNhs10464.577-18G334.74
prostate, adult.CNhs10470.859-1F833.52
skin, adult.CNhs10492.30-1C3108.99
skin, neonate N00.CNhs11124.650-25G457.32
skin, neonate N03.CNhs11215.662-22H369.78
skin, neonate N06.CNhs11097.693-20I558.49
skin, neonate N10.CNhs11108.762-6C464.01
small intestine, neonate N16.CNhs11114.790-21I143.43
spinal cord, adult.CNhs10505.24-13C936.71
spleen, adult.CNhs10465.25-2G298.42
spleen, embryo E16.CNhs11035.461-43C163.98
spleen, embryo E18.CNhs11011.1271-21F284.63
spleen, neonate N10.CNhs11116.752-24D1131.48
spleen, neonate N20.CNhs11112.824-19H1124.80
spleen, neonate N25.CNhs11099.1354-25G3106.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C660.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C959.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D351.13
stomach, adult.CNhs10503.33-1H637.23
stomach, embryo E12.CNhs10588.356-43E364.06
stomach, embryo E15.CNhs10603.1252-16G863.84
stomach, embryo E16.CNhs11022.459-17D456.05
stomach, embryo E17.CNhs11006.1035-18D558.75
stomach, embryo E18.CNhs10999.1286-20C648.91
stomach, neonate N03.CNhs11193.1340-24B847.47
stomach, neonate N07.CNhs11210.718-18A945.46
stomach, neonate N25.CNhs11104.1355-25E429.84
stomach, neonate N30.CNhs11134.1386-42I139.01
submandibular gland, adult.CNhs10469.59-29C145.98
testis, adult.CNhs10504.57-7G523.11
testis, embryo E13.CNhs11031.389-23F564.44
testis, embryo E15.CNhs11034.443-27C551.13
testis, embryo E16.CNhs11033.470-26G558.72
testis, embryo E17.CNhs11029.486-18I557.48
testis, embryo E18.CNhs11027.503-18G555.59
testis, neonate N00.CNhs11189.1300-22B761.96
testis, neonate N07.CNhs11222.726-26I454.17
testis, neonate N10.CNhs11204.763-44D951.59
testis, neonate N20.CNhs11110.839-18H333.10
testis, neonate N30.CNhs11130.1391-42E227.65
thymus, adult.CNhs10471.38-12B5147.26
thymus, embryo E14.CNhs11041.402-44I454.13
thymus, embryo E15.CNhs11005.430-45I265.22
thymus, embryo E16.CNhs11002.456-26C594.58
thymus, embryo E17.CNhs10581.478-18C1120.84
thymus, embryo E18.CNhs10595.1273-19G4121.39
thymus, neonate N02.CNhs11181.1541-43F8119.11
thymus, neonate N03.CNhs11137.2104-43C7129.52
thymus, neonate N06.CNhs11197.681-26C4151.55
thymus, neonate N07.CNhs11211.713-19D3146.39
thymus, neonate N10.CNhs11194.748-24E4139.75
thymus, neonate N20.CNhs11186.820-7A2163.34
thymus, neonate N25.CNhs11125.1362-25G7137.10
thymus, neonate N30.CNhs11132.1393-42G2152.76
tongue, adult.CNhs10499.32-1B442.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H359.27
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F781.91
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G555.57
urinary bladder, adult.CNhs10481.879-12E441.92
uterus, adult pregnant day19.CNhs10497.590-15F540.16
uterus, adult.CNhs10509.92-27E545.79
vagina, adult.CNhs10502.89-27D548.23
vesicular gland, adult.CNhs10491.51-27F840.63
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A150.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A344.69
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D757.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A455.49
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A547.59
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A647.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A750.89
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A857.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A946.08
whole body, embryo E11.CNhs11014.324-5I8101.82
whole body, embryo E12.CNhs10587.857-27C972.62
whole body, embryo E13.CNhs10512.372-23H258.22
whole body, embryo E14.5.CNhs10578.420-27D259.80
whole body, embryo E14.CNhs10519.395-14B159.74
whole body, embryo E16.CNhs10514.453-14F265.63
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G550.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G561.19
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G553.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G550.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G557.29
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G560.17
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G562.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G555.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G551.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G568.11
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G555.05
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G553.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G553.16
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G559.17
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G564.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G557.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G563.66
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G560.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G562.77
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G557.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G562.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G555.51
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G557.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G558.92
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G554.45
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G556.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G567.52
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G559.50
whole body, embryo E17.5.CNhs10513.490-9F949.00
whole body, embryo E17.CNhs10517.475-3I539.72
whole body, embryo E18.CNhs10516.493-3B346.08
whole body, neonate N00.CNhs10525.657-19C240.40
whole body, neonate N01.CNhs10576.659-23C643.23
whole body, neonate N06.CNhs10515.692-21D138.38
whole body, neonate N10.CNhs10518.761-6B443.13





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ2.03e-1229
immune organ2.03e-1229
hematopoietic system7.61e-1045
blood island7.61e-1045
thymus2.08e-0923
neck2.08e-0923
respiratory system epithelium2.08e-0923
hemolymphoid system gland2.08e-0923
pharyngeal epithelium2.08e-0923
thymic region2.08e-0923
pharyngeal gland2.08e-0923
entire pharyngeal arch endoderm2.08e-0923
thymus primordium2.08e-0923
early pharyngeal endoderm2.08e-0923
anterior region of body2.18e-0943
hemolymphoid system2.42e-0948
immune system2.42e-0948
gland of gut6.68e-0924
pharynx9.46e-0924
upper respiratory tract9.46e-0924
chordate pharynx9.46e-0924
pharyngeal arch system9.46e-0924
pharyngeal region of foregut9.46e-0924
mixed endoderm/mesoderm-derived structure1.08e-0835
craniocervical region1.22e-0836
respiratory tract2.26e-0841
respiratory system4.42e-0842
segment of respiratory tract2.42e-0727
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