FFCP PHASE1:Mm9::chr9:121325087..121325103,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:121325087..121325103,+|id=chr9:121325087..121325103,+|ontology_enrichment_celltype=CL:0002563!9.70e-08!9;CL:0002251!9.70e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.15e-09,9;CL:0002251,1.15e-09,9;CL:0000239,1.38e-07,6;CL:0000677,1.38e-07,6;CL:0000584,1.38e-07,6;CL:0002076,3.71e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.04e-14!59;UBERON:0000160!6.78e-13!43;UBERON:0000344!5.42e-12!15;UBERON:0004119!3.32e-11!130;UBERON:0000925!3.32e-11!130;UBERON:0006595!3.32e-11!130;UBERON:0001007!3.49e-11!128;UBERON:0001555!3.49e-11!128;UBERON:0007026!3.49e-11!128;UBERON:0001242!1.81e-10!13;UBERON:0000060!1.81e-10!13;UBERON:0001262!1.81e-10!13;UBERON:0004786!1.81e-10!13;UBERON:0004921!3.65e-10!126;UBERON:0004185!3.65e-10!126;UBERON:0003350!9.70e-08!9;UBERON:0004808!9.70e-08!9;UBERON:0001277!9.70e-08!9;UBERON:0005178!5.53e-07!17;UBERON:0005181!5.53e-07!17;UBERON:0002224!5.53e-07!17;UBERON:0000915!5.53e-07!17;UBERON:0008947!5.53e-07!17;UBERON:0003258!5.53e-07!17;UBERON:0004923!6.60e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.42e-24,31;UBERON:0005409,1.03e-23,47;UBERON:0000344,3.11e-15,15;UBERON:0001242,3.09e-13,13;UBERON:0001262,3.09e-13,13;UBERON:0004786,3.09e-13,13;UBERON:0001007,1.51e-12,116;UBERON:0001555,1.51e-12,116;UBERON:0007026,1.51e-12,116;UBERON:0004119,5.20e-12,118;UBERON:0000925,5.20e-12,118;UBERON:0006595,5.20e-12,118;UBERON:0004921,2.79e-11,114;UBERON:0003350,1.15e-09,9;UBERON:0004808,1.15e-09,9;UBERON:0001277,1.15e-09,9;UBERON:0004923,2.25e-08,24;UBERON:0005178,1.19e-07,17;UBERON:0005181,1.19e-07,17;UBERON:0002224,1.19e-07,17;UBERON:0000915,1.19e-07,17;UBERON:0008947,1.19e-07,17;UBERON:0003258,1.19e-07,17;UBERON:0000485,2.53e-07,11;UBERON:0002048,6.21e-07,14;UBERON:0000117,6.21e-07,14;UBERON:0000171,6.21e-07,14;UBERON:0000170,6.21e-07,14;UBERON:0005597,6.21e-07,14;UBERON:0000118,6.21e-07,14|phase1_expression=0,112.370081259874,115.114807565553,99.2082613086402,104.687207558787,90.8226861043324,56.0670337429262,0.258246646883153,0,0,0,0,0,0.699363219351979,0,0,0,0,0,0,9.77997836737302,0,0,71.0366357202726,78.4579741249721,68.3336037296874,58.1528694814751,62.055715013536,31.1638407908453,45.6174534865475,27.0511222999472,0,0,0,14.4425809875637,12.6338330472454,19.3960888449251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6087803983151,0,0,0,0,0,5.61777680527007,0,0,0,0.563373679106722,0,0,0,1.5154372870785,2.53359865475099,2.02209778005913,14.2729849648825,0,0,0,0,0,0,0.117588707135705,0,7.41584903203122,0,0,0.323533699894818,0,0,22.3670113461747,0,0,27.5893619625279,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.995255764880744,3.53811861807145,1.05220927943237,0.130120442962704,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,1.03481348295606,0,0,0,0,0.556094498451196,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0.462801338662135,0.465067889500816,0.804820204198858,0,0,0,0,0,0,0,0,0,73.3529698224032,10.0491215332147,0.639864751605702,1.16118335930219,3.35055399437443,8.26902450955704,9.33987784148455,11.6037631928661,34.1660924312048,15.481701744057,13.3207660664143,12.9321706826748,13.8424501854575,29.6610404855893,42.1469197255654,53.5690025054248,0,0,0,0.407302655690628,0.775809948670503,0.631222379012867,3.92066530170395,9.88987991463334,4.70996183524124,7.65062416315163,0,0,0,0,0.202860121388503,0,0.50925170356284,0.575392274901621,0,0.274561413188081,0,0.744281895337007,0,0.505157755894224,0,0,21.8008764396594,0.189491411770485,0.325929952884052,2.54617628662782,5.39787571063555,12.5629693081362,18.091316707337,29.6603144743854,8.19702749352193,8.858587585951,6.05928120898451,10.1595255123758,8.11619414769709,14.0309586824066,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.534196811001766,0.651547837414304,3.46437258242324,0,0.242780636154981,0.604647113929502,0.565815239267694,0,0,3.10113951801865,0,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.517434735131018,0.428674070063185,1.06404140185364,0.891844088010353,0.987294123612726,1.522324745573,0.23467170806371,0.21183207086382,0,10.8824926941377,3.39075296061402,2.95533332147964,3.9392873521035,6.40149509005739,29.1480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,44.8695190467103,0.474503990371703,1.62655573701479,8.6404272657441,13.7998275369549,23.8015194483334,18.7461441474901,22.647046868742,35.337052167844,4.79575401179634,0.621339313086926,0,0.897099276263873,1.32366792365678,2.33341426012857,0.645799117388655,0.844780627453891,0.58678619322877,1.17183946359555,0.104859344425711,0,0.288030006257865,0.316011120628178,0,0,0,0.358053391334963,0.39736270956253,0.120195449519969,0,0.504832249740738,0.0762068066549998,0.604957110821043,0.487289403698762,0.192423683280659,0.467507608726276,7.25537227568676,0.221985953374065,0,0.167884616364078,0.386379188064381,46.1698889609908,18.8646172995283,10.7184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.419226325255965,0.919217542250071,1.55572709461131,2.06035057238894,3.85103051510178,3.03236654116557,4.30914809813408,3.39527414494937,2.71560371662659,2.68905640100451,2.75690250986944,2.85776214769844,2.20180219295225,1.54327376370964,3.29668720642645,3.38557516309114,3.08582327146874,3.54951612318675,1.66905332963125,3.34296758254356,2.1645157495526,3.04612588410035,3.29270351170991,2.89376682581627,2.30866993537965,2.24456908663095,3.55905054372522,3.94017929502254,0.818462086339379,2.01417893541756,2.3148793317737,0.999242311751784,1.87145286756327,2.79332370262788,0.382576664137687,0.882365676478062,0.695603506861264|short_description=p@chr9:121325087..121325103,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:121325087..121325103,+ | |||
|description=CAGE_peak_at_chr9:121325087..121325103,+ | |||
|id=chr9:121325087..121325103,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.70e-08!9;CL:0002251!9.70e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.15e-09,9;CL:0002251,1.15e-09,9;CL:0000239,1.38e-07,6;CL:0000677,1.38e-07,6;CL:0000584,1.38e-07,6;CL:0002076,3.71e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.04e-14!59;UBERON:0000160!6.78e-13!43;UBERON:0000344!5.42e-12!15;UBERON:0004119!3.32e-11!130;UBERON:0000925!3.32e-11!130;UBERON:0006595!3.32e-11!130;UBERON:0001007!3.49e-11!128;UBERON:0001555!3.49e-11!128;UBERON:0007026!3.49e-11!128;UBERON:0001242!1.81e-10!13;UBERON:0000060!1.81e-10!13;UBERON:0001262!1.81e-10!13;UBERON:0004786!1.81e-10!13;UBERON:0004921!3.65e-10!126;UBERON:0004185!3.65e-10!126;UBERON:0003350!9.70e-08!9;UBERON:0004808!9.70e-08!9;UBERON:0001277!9.70e-08!9;UBERON:0005178!5.53e-07!17;UBERON:0005181!5.53e-07!17;UBERON:0002224!5.53e-07!17;UBERON:0000915!5.53e-07!17;UBERON:0008947!5.53e-07!17;UBERON:0003258!5.53e-07!17;UBERON:0004923!6.60e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.42e-24,31;UBERON:0005409,1.03e-23,47;UBERON:0000344,3.11e-15,15;UBERON:0001242,3.09e-13,13;UBERON:0001262,3.09e-13,13;UBERON:0004786,3.09e-13,13;UBERON:0001007,1.51e-12,116;UBERON:0001555,1.51e-12,116;UBERON:0007026,1.51e-12,116;UBERON:0004119,5.20e-12,118;UBERON:0000925,5.20e-12,118;UBERON:0006595,5.20e-12,118;UBERON:0004921,2.79e-11,114;UBERON:0003350,1.15e-09,9;UBERON:0004808,1.15e-09,9;UBERON:0001277,1.15e-09,9;UBERON:0004923,2.25e-08,24;UBERON:0005178,1.19e-07,17;UBERON:0005181,1.19e-07,17;UBERON:0002224,1.19e-07,17;UBERON:0000915,1.19e-07,17;UBERON:0008947,1.19e-07,17;UBERON:0003258,1.19e-07,17;UBERON:0000485,2.53e-07,11;UBERON:0002048,6.21e-07,14;UBERON:0000117,6.21e-07,14;UBERON:0000171,6.21e-07,14;UBERON:0000170,6.21e-07,14;UBERON:0005597,6.21e-07,14;UBERON:0000118,6.21e-07,14 | |||
|phase1_expression=0,112.370081259874,115.114807565553,99.2082613086402,104.687207558787,90.8226861043324,56.0670337429262,0.258246646883153,0,0,0,0,0,0.699363219351979,0,0,0,0,0,0,9.77997836737302,0,0,71.0366357202726,78.4579741249721,68.3336037296874,58.1528694814751,62.055715013536,31.1638407908453,45.6174534865475,27.0511222999472,0,0,0,14.4425809875637,12.6338330472454,19.3960888449251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6087803983151,0,0,0,0,0,5.61777680527007,0,0,0,0.563373679106722,0,0,0,1.5154372870785,2.53359865475099,2.02209778005913,14.2729849648825,0,0,0,0,0,0,0.117588707135705,0,7.41584903203122,0,0,0.323533699894818,0,0,22.3670113461747,0,0,27.5893619625279,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.995255764880744,3.53811861807145,1.05220927943237,0.130120442962704,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,1.03481348295606,0,0,0,0,0.556094498451196,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0.462801338662135,0.465067889500816,0.804820204198858,0,0,0,0,0,0,0,0,0,73.3529698224032,10.0491215332147,0.639864751605702,1.16118335930219,3.35055399437443,8.26902450955704,9.33987784148455,11.6037631928661,34.1660924312048,15.481701744057,13.3207660664143,12.9321706826748,13.8424501854575,29.6610404855893,42.1469197255654,53.5690025054248,0,0,0,0.407302655690628,0.775809948670503,0.631222379012867,3.92066530170395,9.88987991463334,4.70996183524124,7.65062416315163,0,0,0,0,0.202860121388503,0,0.50925170356284,0.575392274901621,0,0.274561413188081,0,0.744281895337007,0,0.505157755894224,0,0,21.8008764396594,0.189491411770485,0.325929952884052,2.54617628662782,5.39787571063555,12.5629693081362,18.091316707337,29.6603144743854,8.19702749352193,8.858587585951,6.05928120898451,10.1595255123758,8.11619414769709,14.0309586824066,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.534196811001766,0.651547837414304,3.46437258242324,0,0.242780636154981,0.604647113929502,0.565815239267694,0,0,3.10113951801865,0,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.517434735131018,0.428674070063185,1.06404140185364,0.891844088010353,0.987294123612726,1.522324745573,0.23467170806371,0.21183207086382,0,10.8824926941377,3.39075296061402,2.95533332147964,3.9392873521035,6.40149509005739,29.1480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,44.8695190467103,0.474503990371703,1.62655573701479,8.6404272657441,13.7998275369549,23.8015194483334,18.7461441474901,22.647046868742,35.337052167844,4.79575401179634,0.621339313086926,0,0.897099276263873,1.32366792365678,2.33341426012857,0.645799117388655,0.844780627453891,0.58678619322877,1.17183946359555,0.104859344425711,0,0.288030006257865,0.316011120628178,0,0,0,0.358053391334963,0.39736270956253,0.120195449519969,0,0.504832249740738,0.0762068066549998,0.604957110821043,0.487289403698762,0.192423683280659,0.467507608726276,7.25537227568676,0.221985953374065,0,0.167884616364078,0.386379188064381,46.1698889609908,18.8646172995283,10.7184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.419226325255965,0.919217542250071,1.55572709461131,2.06035057238894,3.85103051510178,3.03236654116557,4.30914809813408,3.39527414494937,2.71560371662659,2.68905640100451,2.75690250986944,2.85776214769844,2.20180219295225,1.54327376370964,3.29668720642645,3.38557516309114,3.08582327146874,3.54951612318675,1.66905332963125,3.34296758254356,2.1645157495526,3.04612588410035,3.29270351170991,2.89376682581627,2.30866993537965,2.24456908663095,3.55905054372522,3.94017929502254,0.818462086339379,2.01417893541756,2.3148793317737,0.999242311751784,1.87145286756327,2.79332370262788,0.382576664137687,0.882365676478062,0.695603506861264 | |||
|short_description=p@chr9:121325087..121325103,+ | |||
}} |
Latest revision as of 18:19, 4 August 2015
Short description: | p@chr9:121325087..121325103, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:121325087..121325103, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.15e-09 | 9 |
epithelial cell of alimentary canal | 1.15e-09 | 9 |
brush border epithelial cell | 1.38e-07 | 6 |
gut absorptive cell | 1.38e-07 | 6 |
enterocyte | 1.38e-07 | 6 |
endo-epithelial cell | 3.71e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.42e-24 | 31 |
gastrointestinal system | 1.03e-23 | 47 |
mucosa | 3.11e-15 | 15 |
intestinal mucosa | 3.09e-13 | 13 |
wall of intestine | 3.09e-13 | 13 |
gastrointestinal system mucosa | 3.09e-13 | 13 |
digestive system | 1.51e-12 | 116 |
digestive tract | 1.51e-12 | 116 |
primitive gut | 1.51e-12 | 116 |
endoderm-derived structure | 5.20e-12 | 118 |
endoderm | 5.20e-12 | 118 |
presumptive endoderm | 5.20e-12 | 118 |
subdivision of digestive tract | 2.79e-11 | 114 |
epithelium of mucosa | 1.15e-09 | 9 |
gastrointestinal system epithelium | 1.15e-09 | 9 |
intestinal epithelium | 1.15e-09 | 9 |
organ component layer | 2.25e-08 | 24 |
thoracic cavity element | 1.19e-07 | 17 |
thoracic segment organ | 1.19e-07 | 17 |
thoracic cavity | 1.19e-07 | 17 |
thoracic segment of trunk | 1.19e-07 | 17 |
respiratory primordium | 1.19e-07 | 17 |
endoderm of foregut | 1.19e-07 | 17 |
simple columnar epithelium | 2.53e-07 | 11 |
lung | 6.21e-07 | 14 |
respiratory tube | 6.21e-07 | 14 |
respiration organ | 6.21e-07 | 14 |
pair of lungs | 6.21e-07 | 14 |
lung primordium | 6.21e-07 | 14 |
lung bud | 6.21e-07 | 14 |