FFCP PHASE1:Hg19::chr1:43162358..43162369,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=4904 | |EntrezGene=4904 | ||
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|UniProt=A0JLU4 | |UniProt=A0JLU4 | ||
|association_with_transcript=-17bp_to_BC020164_5end | |association_with_transcript=-17bp_to_BC020164_5end | ||
|cluster_id=chr1:43162358..43162369,+ | |||
|description=CAGE_peak_11_at_YBX1_5end | |description=CAGE_peak_11_at_YBX1_5end | ||
|id=chr1:43162358..43162369,+ | |id=chr1:43162358..43162369,+ |
Latest revision as of 03:32, 18 September 2015
Short description: | p11@YBX1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_YBX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_BC020164_5end |
EntrezGene: | YBX1 |
HGNC: | 8014 |
UniProt: | A0JLU4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p11@YBX1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.20e-13 | 48 |
phagocyte | 4.20e-13 | 48 |
macrophage | 1.67e-11 | 6 |
myeloid lineage restricted progenitor cell | 7.61e-11 | 66 |
monopoietic cell | 3.73e-10 | 59 |
monocyte | 3.73e-10 | 59 |
monoblast | 3.73e-10 | 59 |
promonocyte | 3.73e-10 | 59 |
myeloid cell | 3.84e-10 | 108 |
common myeloid progenitor | 3.84e-10 | 108 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
larynx | 4.79e-28 | 9 |
upper respiratory tract | 4.71e-13 | 19 |
bone marrow | 1.48e-07 | 76 |
blood vessel smooth muscle | 3.18e-07 | 10 |
arterial system smooth muscle | 3.18e-07 | 10 |
artery smooth muscle tissue | 3.18e-07 | 10 |
aorta smooth muscle tissue | 3.18e-07 | 10 |
bone element | 6.81e-07 | 82 |
Showing 1 to 8 of 8 entries