FFCP PHASE1:Mm9::chr14:52816891..52816942,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:52816891..52816942,-
|short_description=p1@LOC100505120,p1@Supt16h
|description=CAGE_peak_1_at_LOC100505120_5end,CAGE_peak_1_at_Supt16h_5end
|association_...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100505120,114741 | |EntrezGene=100505120,114741 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1134 | |||
|TSSclassifier=NA | |||
|UniProt=G3X956,Q920B9 | |UniProt=G3X956,Q920B9 | ||
|association_with_transcript=0bp_to_ENSMUST00000046709,NM_033618,uc007tor.1_5end | |||
|cluster_id=chr14:52816891..52816942,- | |||
|description=CAGE_peak_1_at_LOC100505120_5end,CAGE_peak_1_at_Supt16h_5end | |||
|id=chr14:52816891..52816942,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.79e-14!29;UBERON:0002370!2.33e-11!23;UBERON:0000974!2.33e-11!23;UBERON:0004807!2.33e-11!23;UBERON:0005058!2.33e-11!23;UBERON:0003351!2.33e-11!23;UBERON:0009113!2.33e-11!23;UBERON:0003295!2.33e-11!23;UBERON:0009722!2.33e-11!23;UBERON:0005562!2.33e-11!23;UBERON:0007690!2.33e-11!23;UBERON:0002390!2.45e-10!45;UBERON:0003061!2.45e-10!45;UBERON:0006562!2.81e-10!24;UBERON:0001557!2.81e-10!24;UBERON:0001042!2.81e-10!24;UBERON:0008814!2.81e-10!24;UBERON:0009145!2.81e-10!24;UBERON:0003408!3.06e-10!24;UBERON:0002193!7.69e-10!48;UBERON:0005057!3.10e-09!51;UBERON:0000065!1.63e-07!41;UBERON:0002405!1.72e-07!70;UBERON:0000072!2.44e-07!27;UBERON:0001048!2.99e-07!147;UBERON:0001004!6.19e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.79e-14,29;UBERON:0005057,1.79e-14,29;UBERON:0002370,2.33e-11,23;UBERON:0000974,2.33e-11,23;UBERON:0004807,2.33e-11,23;UBERON:0005058,2.33e-11,23;UBERON:0003351,2.33e-11,23;UBERON:0009113,2.33e-11,23;UBERON:0003295,2.33e-11,23;UBERON:0009722,2.33e-11,23;UBERON:0005562,2.33e-11,23;UBERON:0007690,2.33e-11,23;UBERON:0000153,3.63e-11,43;UBERON:0000077,7.21e-11,35;UBERON:0002390,2.45e-10,45;UBERON:0003061,2.45e-10,45;UBERON:0006562,2.81e-10,24;UBERON:0001557,2.81e-10,24;UBERON:0001042,2.81e-10,24;UBERON:0008814,2.81e-10,24;UBERON:0009145,2.81e-10,24;UBERON:0003408,3.06e-10,24;UBERON:0002193,7.69e-10,48;UBERON:0002405,7.69e-10,48;UBERON:0007811,1.22e-09,36;UBERON:0001048,1.53e-08,134;UBERON:0000065,1.63e-07,41;UBERON:0000072,2.44e-07,27;UBERON:0001041,4.83e-07,80;UBERON:0001004,6.19e-07,42 | |||
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| ||
|short_description=p1@LOC100505120,p1@Supt16h | |||
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Latest revision as of 01:13, 26 September 2015
Short description: | p1@LOC100505120, p1@Supt16h |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC100505120_5end, CAGE_peak_1_at_Supt16h_5end |
Coexpression cluster: | MCL_coexpression_mm9:1134 |
Association with transcript: | 0bp_to_ENSMUST00000046709, NM_033618, uc007tor.1_5end |
EntrezGene: | 100505120,114741 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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hemopoietic organ | 1.79e-14 | 29 |
immune organ | 1.79e-14 | 29 |
thymus | 2.33e-11 | 23 |
neck | 2.33e-11 | 23 |
respiratory system epithelium | 2.33e-11 | 23 |
hemolymphoid system gland | 2.33e-11 | 23 |
pharyngeal epithelium | 2.33e-11 | 23 |
thymic region | 2.33e-11 | 23 |
pharyngeal gland | 2.33e-11 | 23 |
entire pharyngeal arch endoderm | 2.33e-11 | 23 |
thymus primordium | 2.33e-11 | 23 |
early pharyngeal endoderm | 2.33e-11 | 23 |
anterior region of body | 3.63e-11 | 43 |
mixed endoderm/mesoderm-derived structure | 7.21e-11 | 35 |
hematopoietic system | 2.45e-10 | 45 |
blood island | 2.45e-10 | 45 |
pharynx | 2.81e-10 | 24 |
upper respiratory tract | 2.81e-10 | 24 |
chordate pharynx | 2.81e-10 | 24 |
pharyngeal arch system | 2.81e-10 | 24 |
pharyngeal region of foregut | 2.81e-10 | 24 |
gland of gut | 3.06e-10 | 24 |
hemolymphoid system | 7.69e-10 | 48 |
immune system | 7.69e-10 | 48 |
craniocervical region | 1.22e-09 | 36 |
primordium | 1.53e-08 | 134 |
respiratory tract | 1.63e-07 | 41 |
segment of respiratory tract | 2.44e-07 | 27 |
foregut | 4.83e-07 | 80 |
respiratory system | 6.19e-07 | 42 |