FFCP PHASE1:Mm9::chr16:3718105..3718150,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:3718105..3718150,-
|short_description=p1@Mefv
|description=CAGE_peak_1_at_Mefv_5end
|association_with_transcript=0bp_to_ENSMUST00000023180,ENSMUST00000100...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=54483 | |EntrezGene=54483 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2996 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JJ26,Q32MT0,Q32MT1 | |UniProt=Q9JJ26,Q32MT0,Q32MT1 | ||
|association_with_transcript=0bp_to_ENSMUST00000023180,ENSMUST00000100222,NM_001161790,NM_001161791,NM_019453,uc007xym.2,uc012aam.1,uc012aan.1_5end | |||
|cluster_id=chr16:3718105..3718150,- | |||
|description=CAGE_peak_1_at_Mefv_5end | |||
|id=chr16:3718105..3718150,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.50e-12,19;CL:0000557,3.56e-08,7;CL:0000763,1.41e-07,16;CL:0002092,2.59e-07,3;CL:0002540,2.59e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.47e-08,3;DOID:4045,5.47e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002405!1.73e-14!70;UBERON:0002193!2.41e-11!48;UBERON:0002390!7.79e-10!45;UBERON:0003061!7.79e-10!45;UBERON:0001474!1.13e-08!22;UBERON:0004765!1.13e-08!22;UBERON:0001434!1.13e-08!22;UBERON:0002371!6.51e-08!16;UBERON:0005057!6.71e-07!51;UBERON:0002204!7.20e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.27e-14,16;UBERON:0002204,3.23e-14,32;UBERON:0001474,4.56e-14,22;UBERON:0004765,4.56e-14,22;UBERON:0001434,4.56e-14,22;UBERON:0002193,3.48e-10,48;UBERON:0002405,3.48e-10,48;UBERON:0002390,1.06e-09,45;UBERON:0003061,1.06e-09,45;UBERON:0002106,2.30e-08,6;UBERON:0004457,2.30e-08,6;UBERON:0000042,2.30e-08,6;UBERON:0004854,2.30e-08,6;UBERON:0009034,2.30e-08,6;UBERON:0002095,2.30e-08,6;UBERON:0004782,2.30e-08,6;UBERON:0003281,2.30e-08,6;UBERON:0009664,2.30e-08,6;UBERON:0002296,2.30e-08,6;UBERON:0005602,2.30e-08,6;UBERON:0001179,2.30e-08,6;UBERON:0006293,2.30e-08,6;UBERON:0003887,7.13e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0,0.0874204024189974,0.666219523631325,2.42970320867791,0,1.73504190947031,1.7824876368746,0.84877930359606,0.425216450755349,0,0,0.47997726838022,0.91763712426868,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,19.2524550138978,27.346737058333,42.4054232618777,22.9410280332096,19.8083190637949,18.934903768215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29929802096979,9.88866362566974,7.8152812644071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,13.7237078333001,0,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,9.73071607144862,0.485300549842228,1.54589062922275,0.969750506270444,0,0,0,1.02182822083437,19.0506047964413,19.196887391789,34.6901719909467,0,0,0,0,0,0,0,0,3.6078021476927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.7323846678896,42.9771004881574,41.7720344111521,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0,0,0,0.330418782983798,0.793351699990633,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0.329397909448022,1.25667604400135,0.397912944082302,1.16978452271472,0,0.864552199498777,0.995706366271836,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,1.12431056192427,0.202860121388503,2.41177159752417,1.52775511068852,1.43848068725405,0.810676133875177,0.274561413188081,2.87536413054709,0.744281895337007,0.936113019343682,0.505157755894224,0.179397413521912,0.482443521363367,2.58654466233247,0,0,0,0,0.167506257441816,0,0.195133647857799,0.630540576424764,0.44292937929755,0.159454768657487,0.983179888294428,1.20879487306127,0.144649058581512,1.50791283939272,9.79030230873677,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,1.15420377059036,0.161464426695906,0,0,0.164140899745061,0.582961673259701,0,5.98048082792484,1.65109494370578,1.48155621895769,0.941842285023455,2.59719032669948,2.74533807847827,0.679913719975421,1.6794174278839,0.690999869022119,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0.330613822901344,0,0.518459893167171,0,0,0,0.165458490457098,0,0,0,0.234714477291508,0,0,0,0,0.632022241256357,0,0.308132871494482,0.25984164595559,0.537080087002444,0.993406773906324,0.360586348559907,0,0.403865799792591,0.457240839929999,0,0.194915761479505,0.288635524920988,1.05189211963412,0,0,0,0,0.19318959403219,0.375364950902364,0.36630324853453,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0.824171801606613,0,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,1.54413993383661,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0,0.0874204024189974,0.666219523631325,2.42970320867791,0,1.73504190947031,1.7824876368746,0.84877930359606,0.425216450755349,0,0,0.47997726838022,0.91763712426868,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,19.2524550138978,27.346737058333,42.4054232618777,22.9410280332096,19.8083190637949,18.934903768215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29929802096979,9.88866362566974,7.8152812644071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,13.7237078333001,0,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,9.73071607144862,0.485300549842228,1.54589062922275,0.969750506270444,0,0,0,1.02182822083437,19.0506047964413,19.196887391789,34.6901719909467,0,0,0,0,0,0,0,0,3.6078021476927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.7323846678896,42.9771004881574,41.7720344111521,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0,0,0,0.330418782983798,0.793351699990633,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0.329397909448022,1.25667604400135,0.397912944082302,1.16978452271472,0,0.864552199498777,0.995706366271836,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,1.12431056192427,0.202860121388503,2.41177159752417,1.52775511068852,1.43848068725405,0.810676133875177,0.274561413188081,2.87536413054709,0.744281895337007,0.936113019343682,0.505157755894224,0.179397413521912,0.482443521363367,2.58654466233247,0,0,0,0,0.167506257441816,0,0.195133647857799,0.630540576424764,0.44292937929755,0.159454768657487,0.983179888294428,1.20879487306127,0.144649058581512,1.50791283939272,9.79030230873677,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,1.15420377059036,0.161464426695906,0,0,0.164140899745061,0.582961673259701,0,5.98048082792484,1.65109494370578,1.48155621895769,0.941842285023455,2.59719032669948,2.74533807847827,0.679913719975421,1.6794174278839,0.690999869022119,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0.330613822901344,0,0.518459893167171,0,0,0,0.165458490457098,0,0,0,0.234714477291508,0,0,0,0,0.632022241256357,0,0.308132871494482,0.25984164595559,0.537080087002444,0.993406773906324,0.360586348559907,0,0.403865799792591,0.457240839929999,0,0.194915761479505,0.288635524920988,1.05189211963412,0,0,0,0,0.19318959403219,0.375364950902364,0.36630324853453,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0.824171801606613,0,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,1.54413993383661,0.927471342481686 | ||
|short_description=p1@Mefv | |||
}} | }} |
Latest revision as of 23:31, 1 October 2015
Short description: | p1@Mefv |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mefv_5end |
Coexpression cluster: | MCL_coexpression_mm9:2996 |
Association with transcript: | 0bp_to_ENSMUST00000023180, ENSMUST00000100222, NM_001161790, NM_001161791, NM_019453, uc007xym.2, uc012aam.1, uc012aan.1_5end |
EntrezGene: | Mefv |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.50e-12 | 19 |
granulocyte monocyte progenitor cell | 3.56e-08 | 7 |
myeloid cell | 1.41e-07 | 16 |
bone marrow cell | 2.59e-07 | 3 |
mesenchymal stem cell of the bone marrow | 2.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.27e-14 | 16 |
musculoskeletal system | 3.23e-14 | 32 |
bone element | 4.56e-14 | 22 |
skeletal element | 4.56e-14 | 22 |
skeletal system | 4.56e-14 | 22 |
hemolymphoid system | 3.48e-10 | 48 |
immune system | 3.48e-10 | 48 |
hematopoietic system | 1.06e-09 | 45 |
blood island | 1.06e-09 | 45 |
spleen | 2.30e-08 | 6 |
cavity lining | 2.30e-08 | 6 |
serous membrane | 2.30e-08 | 6 |
gastrointestinal system mesentery | 2.30e-08 | 6 |
stomach region | 2.30e-08 | 6 |
mesentery | 2.30e-08 | 6 |
gastrointestinal system serosa | 2.30e-08 | 6 |
mesentery of stomach | 2.30e-08 | 6 |
gut mesentery | 2.30e-08 | 6 |
dorsal mesentery | 2.30e-08 | 6 |
dorsal mesogastrium | 2.30e-08 | 6 |
peritoneal cavity | 2.30e-08 | 6 |
spleen primordium | 2.30e-08 | 6 |
intraembryonic coelom | 7.13e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.47e-08 | 3 |
muscle cancer | 5.47e-08 | 3 |