FFCP PHASE1:Mm9::chr17:36117059..36117078,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:36117059..36117078,+
|short_description=p2@Gnl1
|description=CAGE_peak_2_at_Gnl1_5end
|association_with_transcript=159bp_to_ENSMUST00000166679,NM_008136,u...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14670 | |EntrezGene=14670 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PYS8,P36916,Q52KE3 | |UniProt=E9PYS8,P36916,Q52KE3 | ||
|association_with_transcript=159bp_to_ENSMUST00000166679,NM_008136,uc008cjo.1_5end | |||
|cluster_id=chr17:36117059..36117078,+ | |||
|description=CAGE_peak_2_at_Gnl1_5end | |||
|id=chr17:36117059..36117078,+ | |||
|ontology_enrichment_celltype=CL:0002321!3.81e-15!70;CL:0000220!3.81e-15!70;CL:0000055!3.04e-11!50;CL:0000221!5.80e-11!44;CL:0000133!5.80e-11!44;CL:0002319!1.76e-10!43;CL:0000548!8.54e-10!115;CL:0000004!8.54e-10!115;CL:0000255!8.54e-10!115;CL:0002371!1.51e-08!118;CL:0000117!1.88e-08!23;CL:0000337!1.88e-08!23;CL:0000144!1.92e-08!121;CL:0000012!1.92e-08!121;CL:0000393!8.54e-08!39;CL:0000211!8.54e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.76e-15,70;CL:0000221,5.65e-11,44;CL:0000133,5.65e-11,44;CL:0002319,1.72e-10,43;CL:0000117,1.81e-08,23;CL:0000337,1.81e-08,23;CL:0000393,8.44e-08,39;CL:0000211,8.44e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.31e-10!75;UBERON:0001016!2.31e-10!75;UBERON:0001017!2.45e-10!73;UBERON:0005743!2.45e-10!73;UBERON:0001049!1.26e-07!52;UBERON:0005068!1.26e-07!52;UBERON:0006241!1.26e-07!52;UBERON:0007135!1.26e-07!52;UBERON:0000955!1.37e-07!50;UBERON:0006238!1.37e-07!50;UBERON:0002616!1.38e-07!49;UBERON:0004121!4.29e-07!102;UBERON:0000924!4.29e-07!102;UBERON:0006601!4.29e-07!102;UBERON:0000033!4.78e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.91e-10,75;UBERON:0001017,2.03e-10,73;UBERON:0000073,8.54e-09,54;UBERON:0001049,1.04e-07,52;UBERON:0005068,1.04e-07,52;UBERON:0006241,1.04e-07,52;UBERON:0007135,1.04e-07,52;UBERON:0004121,2.03e-07,95;UBERON:0000924,2.03e-07,95;UBERON:0006601,2.03e-07,95 | |||
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| ||
|short_description=p2@Gnl1 | |||
}} | }} |
Latest revision as of 11:04, 26 September 2015
Short description: | p2@Gnl1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gnl1_5end |
Coexpression cluster: | NA |
Association with transcript: | 159bp_to_ENSMUST00000166679, NM_008136, uc008cjo.1_5end |
EntrezGene: | Gnl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.76e-15 | 70 |
ectodermal cell | 5.65e-11 | 44 |
neurectodermal cell | 5.65e-11 | 44 |
neural cell | 1.72e-10 | 43 |
CNS neuron (sensu Vertebrata) | 1.81e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.81e-08 | 23 |
electrically responsive cell | 8.44e-08 | 39 |
electrically active cell | 8.44e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.91e-10 | 75 |
central nervous system | 2.03e-10 | 73 |
regional part of nervous system | 8.54e-09 | 54 |
neural tube | 1.04e-07 | 52 |
neural rod | 1.04e-07 | 52 |
future spinal cord | 1.04e-07 | 52 |
neural keel | 1.04e-07 | 52 |
ectoderm-derived structure | 2.03e-07 | 95 |
ectoderm | 2.03e-07 | 95 |
presumptive ectoderm | 2.03e-07 | 95 |