FFCP PHASE2:Hg19::chr17:46806098..46806118,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:10481 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:5112 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=5112 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q4KR72,Q92826 | ||
|association_with_transcript=0bp_to_NM_006361,uc002ioa.2_5end | |association_with_transcript=0bp_to_NM_006361,uc002ioa.2_5end | ||
|cluster_id=chr17:46806098..46806118,- | |cluster_id=chr17:46806098..46806118,- |
Latest revision as of 17:42, 15 September 2015
Short description: | p3@HOXB13 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXB13_5end |
Coexpression cluster: | C2415_prostate_neuroepithelioma_neuroectodermal_rhabdomyosarcoma_Melanocyte_carcinoid_argyrophil |
Association with transcript: | 0bp_to_NM_006361, uc002ioa.2_5end |
EntrezGene: | HOXB13 |
HGNC: | 5112 |
UniProt: | Q4KR72Q92826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@HOXB13 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 1.63e-12 | 253 |
light melanocyte | 6.55e-09 | 3 |
melanocyte | 7.61e-09 | 10 |
melanoblast | 7.61e-09 | 10 |
epithelial cell of stomach | 2.29e-07 | 3 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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larynx | 3.60e-21 | 9 |
pancreas | 8.00e-12 | 10 |
transitional epithelium | 1.28e-09 | 6 |
upper respiratory tract | 5.04e-09 | 19 |
urothelium | 9.87e-08 | 5 |
viscus | 1.00e-07 | 18 |
hindgut | 4.59e-07 | 19 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
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cell type cancer | 4.13e-31 | 143 |
disease of cellular proliferation | 3.05e-25 | 239 |
cancer | 9.17e-24 | 235 |
carcinoma | 4.10e-17 | 106 |
adenocarcinoma | 4.23e-11 | 25 |
gastrointestinal system cancer | 1.23e-09 | 14 |
sarcoma | 1.67e-08 | 20 |
Showing 1 to 7 of 7 entries