FFCP PHASE2:Hg19::chr19:17581187..17581208,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:376497 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10995 |TSScl...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=376497 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10995 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q6PCB7 | ||
|association_with_transcript=-91bp_to_ENST00000252595,NM_198580,uc002ngt.1,uc002ngu.1,uc010xpp.1_5end | |association_with_transcript=-91bp_to_ENST00000252595,NM_198580,uc002ngt.1,uc002ngu.1,uc010xpp.1_5end | ||
|cluster_id=chr19:17581187..17581208,+ | |cluster_id=chr19:17581187..17581208,+ |
Latest revision as of 12:20, 16 September 2015
Short description: | p2@SLC27A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC27A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -91bp_to_ENST00000252595, NM_198580, uc002ngt.1, uc002ngu.1, uc010xpp.1_5end |
EntrezGene: | SLC27A1 |
HGNC: | 10995 |
UniProt: | Q6PCB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@SLC27A1 |
---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.63e-08 | 67 |
myeloid leukocyte | 1.51e-07 | 72 |
myeloid lineage restricted progenitor cell | 3.80e-07 | 66 |
defensive cell | 4.98e-07 | 48 |
phagocyte | 4.98e-07 | 48 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 5.73e-14 | 56 |
neural rod | 5.73e-14 | 56 |
future spinal cord | 5.73e-14 | 56 |
neural keel | 5.73e-14 | 56 |
regional part of nervous system | 5.92e-14 | 53 |
regional part of brain | 5.92e-14 | 53 |
adult organism | 4.29e-12 | 114 |
ecto-epithelium | 2.85e-11 | 104 |
brain | 5.67e-11 | 68 |
future brain | 5.67e-11 | 68 |
Showing 1 to 10 of 40 entries