FFCP PHASE2:Hg19::chr22:21213352..21213386,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9342 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11133 |TSSclas...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9342 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11133 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 05:33, 19 September 2015
Short description: | p1@SNAP29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNAP29_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000490458_5end |
EntrezGene: | SNAP29 |
HGNC: | 11133 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SNAP29 |
---|
0
20
40
60
80
100
120
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.43e-27 | 72 |
myeloid cell | 1.48e-26 | 108 |
common myeloid progenitor | 1.48e-26 | 108 |
myeloid lineage restricted progenitor cell | 1.18e-24 | 66 |
granulocyte monocyte progenitor cell | 1.76e-24 | 67 |
macrophage dendritic cell progenitor | 1.11e-23 | 61 |
monopoietic cell | 7.72e-23 | 59 |
monocyte | 7.72e-23 | 59 |
monoblast | 7.72e-23 | 59 |
promonocyte | 7.72e-23 | 59 |
Showing 1 to 10 of 26 entries
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.36e-22 | 76 |
hemolymphoid system | 3.40e-22 | 108 |
immune system | 4.10e-22 | 93 |
hematopoietic system | 7.71e-21 | 98 |
blood island | 7.71e-21 | 98 |
bone element | 1.20e-20 | 82 |
skeletal element | 1.56e-20 | 90 |
skeletal system | 7.48e-20 | 100 |
musculoskeletal system | 5.26e-17 | 167 |
connective tissue | 4.70e-14 | 371 |
Showing 1 to 10 of 14 entries