Personal tools

FFCP PHASE1:Mm9::chr4:98103550..98103568,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr4:98103550..98103568,+ |short_description=p11@Inadl |description=CAGE_peak_11_at_Inadl_5end |association_with_transcript=-64bp_to_uc008tue.1_5end |EntrezGen...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:98103550..98103568,+
|DHSsupport=NA
|short_description=p11@Inadl
|DPIdataset=NA
|description=CAGE_peak_11_at_Inadl_5end
|association_with_transcript=-64bp_to_uc008tue.1_5end
|EntrezGene=12695
|EntrezGene=12695
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=A2ADS9
|UniProt=A2ADS9
|association_with_transcript=-64bp_to_uc008tue.1_5end
|cluster_id=chr4:98103550..98103568,+
|description=CAGE_peak_11_at_Inadl_5end
|id=chr4:98103550..98103568,+
|ontology_enrichment_celltype=CL:0000838!2.39e-17!12;CL:0000542!7.74e-16!13;CL:0000051!7.74e-16!13;CL:0000791!1.06e-15!9;CL:0000789!1.06e-15!9;CL:0002420!1.06e-15!9;CL:0002419!1.06e-15!9;CL:0000790!1.06e-15!9;CL:0000084!1.31e-15!11;CL:0000827!1.31e-15!11;CL:0000624!1.06e-13!8;CL:0000738!1.40e-11!17;CL:0002087!1.40e-11!17;CL:0002031!1.79e-10!25;CL:0000988!2.25e-10!32;CL:0002032!2.25e-10!32;CL:0000037!2.25e-10!32;CL:0000566!2.25e-10!32;CL:0000837!2.25e-10!32;CL:0000893!1.83e-09!6;CL:0002489!1.83e-09!6;CL:0000898!1.83e-09!6;CL:0000809!1.83e-09!6;CL:0000810!1.83e-09!6;CL:0000895!1.83e-09!6;CL:0000808!1.83e-09!6;CL:0000894!1.83e-09!6;CL:0000806!1.83e-09!6;CL:0000807!1.83e-09!6;CL:0000805!1.83e-09!6;CL:0002425!1.83e-09!6;CL:0002436!1.83e-09!6;CL:0002427!1.83e-09!6;CL:0002428!1.83e-09!6;CL:0002429!1.83e-09!6;CL:0002433!1.83e-09!6;CL:0002431!1.83e-09!6;CL:0002432!1.83e-09!6
|ontology_enrichment_celltype_v019_2=CL:0000791,7.05e-24,9;CL:0000789,7.05e-24,9;CL:0002420,7.05e-24,9;CL:0002419,7.05e-24,9;CL:0000790,7.05e-24,9;CL:0000084,1.72e-19,11;CL:0000827,1.72e-19,11;CL:0000624,4.44e-19,8;CL:0000838,7.61e-18,12;CL:0000542,1.89e-16,13;CL:0000051,1.89e-16,13;CL:0000738,1.67e-12,17;CL:0002087,1.67e-12,17;CL:0000893,1.13e-09,6;CL:0002489,1.13e-09,6;CL:0000898,1.13e-09,6;CL:0000809,1.13e-09,6;CL:0000810,1.13e-09,6;CL:0000895,1.13e-09,6;CL:0000808,1.13e-09,6;CL:0000894,1.13e-09,6;CL:0000806,1.13e-09,6;CL:0000807,1.13e-09,6;CL:0000805,1.13e-09,6;CL:0002425,1.13e-09,6;CL:0002436,1.13e-09,6;CL:0002427,1.13e-09,6;CL:0002428,1.13e-09,6;CL:0002429,1.13e-09,6;CL:0002433,1.13e-09,6;CL:0002431,1.13e-09,6;CL:0002432,1.13e-09,6;CL:0002031,2.20e-08,25;CL:0000815,2.11e-07,1;CL:0000792,2.11e-07,1;CL:0000625,4.83e-07,1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!7.72e-28!23;UBERON:0000974!7.72e-28!23;UBERON:0004807!7.72e-28!23;UBERON:0005058!7.72e-28!23;UBERON:0003351!7.72e-28!23;UBERON:0009113!7.72e-28!23;UBERON:0003295!7.72e-28!23;UBERON:0009722!7.72e-28!23;UBERON:0005562!7.72e-28!23;UBERON:0007690!7.72e-28!23;UBERON:0006562!1.77e-26!24;UBERON:0003408!1.77e-26!24;UBERON:0001557!1.77e-26!24;UBERON:0001042!1.77e-26!24;UBERON:0008814!1.77e-26!24;UBERON:0009145!1.77e-26!24;UBERON:0004177!4.90e-26!29;UBERON:0000072!5.25e-23!27;UBERON:0002193!8.78e-21!48;UBERON:0002390!1.70e-20!45;UBERON:0003061!1.70e-20!45;UBERON:0000063!1.14e-16!35;UBERON:0005057!5.40e-14!51;UBERON:0002405!1.45e-13!70;UBERON:0000065!1.50e-13!41;UBERON:0001004!4.06e-13!42;UBERON:0003081!1.02e-12!88;UBERON:0003929!4.27e-10!55;UBERON:0002368!7.23e-09!60;UBERON:0002530!7.79e-08!65;UBERON:0000490!1.20e-07!66;UBERON:0005911!4.02e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.59e-35,23;UBERON:0000974,2.59e-35,23;UBERON:0004807,2.59e-35,23;UBERON:0005058,2.59e-35,23;UBERON:0003351,2.59e-35,23;UBERON:0009113,2.59e-35,23;UBERON:0003295,2.59e-35,23;UBERON:0009722,2.59e-35,23;UBERON:0005562,2.59e-35,23;UBERON:0007690,2.59e-35,23;UBERON:0006562,8.63e-34,24;UBERON:0003408,8.63e-34,24;UBERON:0001557,8.63e-34,24;UBERON:0001042,8.63e-34,24;UBERON:0008814,8.63e-34,24;UBERON:0009145,8.63e-34,24;UBERON:0000072,6.77e-30,27;UBERON:0004177,9.57e-28,29;UBERON:0005057,9.57e-28,29;UBERON:0000077,9.18e-23,35;UBERON:0007811,4.29e-22,36;UBERON:0000065,3.11e-19,41;UBERON:0001004,9.62e-19,42;UBERON:0000153,2.83e-18,43;UBERON:0002390,2.12e-17,45;UBERON:0003061,2.12e-17,45;UBERON:0002193,3.17e-16,48;UBERON:0002405,3.17e-16,48;UBERON:0003929,5.61e-14,55;UBERON:0002368,1.09e-12,60;UBERON:0002530,1.34e-11,65;UBERON:0000490,2.11e-11,66;UBERON:0005911,7.69e-11,69;UBERON:0000949,2.52e-10,72;UBERON:0001041,3.86e-09,80;UBERON:0003081,2.81e-08,87
|phase1_expression=0,0,0,0,0,0,0,4.39019299701359,0.703943610758334,2.34064526321993,0.171217968225505,0,6.16322627752341,4.98296293788285,0,0,0,0.473193248037357,0.548457734422955,0,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,7.25362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0.169978429993855,0.69975726161829,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.79213344753814,0,0.102710957164827,0.129920822977795,0.358053391334963,0.993406773906324,1.56254084375959,1.47689527174577,1.51449674922221,2.66723823292499,1.91569751759997,2.82627854145282,3.84847366561318,6.19447581562315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,4.39019299701359,0.703943610758334,2.34064526321993,0.171217968225505,0,6.16322627752341,4.98296293788285,0,0,0,0.473193248037357,0.548457734422955,0,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,7.25362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0.169978429993855,0.69975726161829,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.79213344753814,0,0.102710957164827,0.129920822977795,0.358053391334963,0.993406773906324,1.56254084375959,1.47689527174577,1.51449674922221,2.66723823292499,1.91569751759997,2.82627854145282,3.84847366561318,6.19447581562315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421
|short_description=p11@Inadl
}}
}}

Latest revision as of 07:53, 27 September 2015

Short description:p11@Inadl
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_11_at_Inadl_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: -64bp_to_uc008tue.1_5end
EntrezGene:Inadl
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
1
2
3
4
5
6
7
8




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data