FFCP PHASE1:Mm9::chr8:40244709..40244712,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:40244709..40244712,+
|short_description=p@chr8:40244709..40244712,+
|description=CAGE_peak_at_chr8:40244709..40244712,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:40244709..40244712,+ | |||
|description=CAGE_peak_at_chr8:40244709..40244712,+ | |||
|id=chr8:40244709..40244712,+ | |||
|ontology_enrichment_celltype=CL:0000393!5.73e-24!39;CL:0000211!5.73e-24!39;CL:0000540!7.10e-21!33;CL:0000047!7.10e-21!33;CL:0000031!7.10e-21!33;CL:0000404!7.10e-21!33;CL:0000055!2.70e-20!50;CL:0000221!9.87e-19!44;CL:0000133!9.87e-19!44;CL:0002319!6.85e-18!43;CL:0002321!7.87e-17!70;CL:0000220!7.87e-17!70;CL:0000117!2.32e-15!23;CL:0000337!2.32e-15!23;CL:0000723!1.53e-11!91;CL:0000048!1.53e-11!91;CL:0000548!6.61e-11!115;CL:0000004!6.61e-11!115;CL:0000255!6.61e-11!115;CL:0000034!2.82e-10!97;CL:0002371!3.71e-10!118;CL:0000144!1.87e-09!121;CL:0000012!1.87e-09!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.99e-22,39;CL:0000211,1.99e-22,39;CL:0000540,5.65e-19,33;CL:0000047,5.65e-19,33;CL:0000031,5.65e-19,33;CL:0000404,5.65e-19,33;CL:0000117,1.94e-14,23;CL:0000337,1.94e-14,23;CL:0002319,3.08e-14,43;CL:0000221,7.00e-14,44;CL:0000133,7.00e-14,44;CL:0000723,5.46e-12,91;CL:0000048,5.46e-12,91;CL:0002321,9.35e-12,70;CL:0000034,3.96e-11,97;CL:0002612,7.12e-09,3;CL:0002614,3.32e-08,3;CL:0002610,5.02e-08,3;CL:0000815,3.59e-07,1;CL:0000792,3.59e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.78e-10!75;UBERON:0001016!8.78e-10!75;UBERON:0001017!5.08e-09!73;UBERON:0005743!5.08e-09!73;UBERON:0002020!4.19e-08!34;UBERON:0004121!7.56e-07!102;UBERON:0000924!7.56e-07!102;UBERON:0006601!7.56e-07!102;UBERON:0000010!7.76e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,7.12e-09,3;UBERON:0010313,1.31e-08,3;UBERON:0002342,1.31e-08,3;UBERON:0002005,1.31e-08,3;UBERON:0005428,1.31e-08,3;UBERON:0005062,1.31e-08,3;UBERON:0002038,3.32e-08,3;UBERON:0009663,3.32e-08,3;UBERON:0009661,3.32e-08,3;UBERON:0000125,3.32e-08,3;UBERON:0002308,3.32e-08,3;UBERON:0004684,5.02e-08,3;UBERON:0002275,5.02e-08,3;UBERON:0001017,8.89e-08,73;UBERON:0001016,1.57e-07,75 | |||
|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0,1.93684985162364,0,0.234064526321993,0,0.638177271962691,0.342401459862411,1.48614684112296,0,0,0,0,0.137114433605739,0,1.10556277196391,0,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0,0.760093677825496,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.709638518536602,1.28482726513177,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0,0.257259436035947,0,1.54701627683233,0.606949382578793,0,1.26766280701236,0,0,0,0,0,0.599200221036809,0,0.829516898467821,0.540023753326763,0.420649922702764,0.856952953211411,0.883474163806454,0.489963196859816,0.191690942036473,0.919218786610021,1.10115880999389,1.27687338085188,0.46081959976873,0.395658863190582,0.365950574409639,1.04182674111352,0,1.12552522006336,1.5279824777681,2.35702868378934,1.99320353118744,0.745597783301202,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0.539703191637817,0,0,0.140444420131752,0.681721290312231,0.779358013808606,0,0.985903938436763,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0.457500602818626,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,1.57754109708128,0.390438744296638,1.72338718186239,0.955875191810208,0.222798674082394,0.283076530788832,1.61924280669958,0.292255857911312,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0.198681354781265,0.120195449519969,0.295379054349154,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,0,0,0,0,0,0,0,0,0.685082519770642,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0,1.93684985162364,0,0.234064526321993,0,0.638177271962691,0.342401459862411,1.48614684112296,0,0,0,0,0.137114433605739,0,1.10556277196391,0,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0,0.760093677825496,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.709638518536602,1.28482726513177,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0,0.257259436035947,0,1.54701627683233,0.606949382578793,0,1.26766280701236,0,0,0,0,0,0.599200221036809,0,0.829516898467821,0.540023753326763,0.420649922702764,0.856952953211411,0.883474163806454,0.489963196859816,0.191690942036473,0.919218786610021,1.10115880999389,1.27687338085188,0.46081959976873,0.395658863190582,0.365950574409639,1.04182674111352,0,1.12552522006336,1.5279824777681,2.35702868378934,1.99320353118744,0.745597783301202,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0.539703191637817,0,0,0.140444420131752,0.681721290312231,0.779358013808606,0,0.985903938436763,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0.457500602818626,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,1.57754109708128,0.390438744296638,1.72338718186239,0.955875191810208,0.222798674082394,0.283076530788832,1.61924280669958,0.292255857911312,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0.198681354781265,0.120195449519969,0.295379054349154,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,0,0,0,0,0,0,0,0,0.685082519770642,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:40244709..40244712,+ | |||
}} | }} |
Latest revision as of 09:49, 6 August 2015
Short description: | p@chr8:40244709..40244712, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:40244709..40244712, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.99e-22 | 39 |
electrically active cell | 1.99e-22 | 39 |
neuron | 5.65e-19 | 33 |
neuronal stem cell | 5.65e-19 | 33 |
neuroblast | 5.65e-19 | 33 |
electrically signaling cell | 5.65e-19 | 33 |
CNS neuron (sensu Vertebrata) | 1.94e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.94e-14 | 23 |
neural cell | 3.08e-14 | 43 |
ectodermal cell | 7.00e-14 | 44 |
neurectodermal cell | 7.00e-14 | 44 |
somatic stem cell | 5.46e-12 | 91 |
multi fate stem cell | 5.46e-12 | 91 |
embryonic cell | 9.35e-12 | 70 |
stem cell | 3.96e-11 | 97 |
neuron of the ventral spinal cord | 7.12e-09 | 3 |
neuron of the substantia nigra | 3.32e-08 | 3 |
raphe nuclei neuron | 5.02e-08 | 3 |
regulatory T cell | 3.59e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.59e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 7.12e-09 | 3 |
neural crest-derived structure | 1.31e-08 | 3 |
neural crest | 1.31e-08 | 3 |
enteric nervous system | 1.31e-08 | 3 |
vagal neural crest | 1.31e-08 | 3 |
neural fold | 1.31e-08 | 3 |
substantia nigra | 3.32e-08 | 3 |
telencephalic nucleus | 3.32e-08 | 3 |
midbrain nucleus | 3.32e-08 | 3 |
neural nucleus | 3.32e-08 | 3 |
nucleus of brain | 3.32e-08 | 3 |
raphe nuclei | 5.02e-08 | 3 |
reticular formation | 5.02e-08 | 3 |
central nervous system | 8.89e-08 | 73 |
nervous system | 1.57e-07 | 75 |