FFCP PHASE1:Mm9::chr9:120401855..120401862,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:120401855..120401862,+
|short_description=p4@Eif1b
|description=CAGE_peak_4_at_Eif1b_5end
|association_with_transcript=131bp_to_ENSMUST00000007139,NM_02689...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68969 | |EntrezGene=68969 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9CXU9,Q4V9T8 | |UniProt=Q9CXU9,Q4V9T8 | ||
|association_with_transcript=131bp_to_ENSMUST00000007139,NM_026892,uc009scp.2_5end | |||
|cluster_id=chr9:120401855..120401862,+ | |||
|description=CAGE_peak_4_at_Eif1b_5end | |||
|id=chr9:120401855..120401862,+ | |||
|ontology_enrichment_celltype=CL:0000219!1.76e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,7.33e-09,46;CL:0000134,7.33e-09,46;CL:0000219,1.14e-08,54;CL:0000988,7.23e-08,32;CL:0002032,7.23e-08,32;CL:0000037,7.23e-08,32;CL:0000837,7.23e-08,32;CL:0000084,3.97e-07,11;CL:0000827,3.97e-07,11;CL:0000838,5.67e-07,12;CL:0000542,5.97e-07,13;CL:0000051,5.97e-07,13;CL:0000738,5.98e-07,17;CL:0002087,5.98e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.65e-09,45;UBERON:0003061,5.65e-09,45;UBERON:0002384,7.33e-09,46;UBERON:0002193,1.54e-08,48;UBERON:0002405,1.54e-08,48;UBERON:0002370,1.16e-07,23;UBERON:0000974,1.16e-07,23;UBERON:0004807,1.16e-07,23;UBERON:0005058,1.16e-07,23;UBERON:0003351,1.16e-07,23;UBERON:0009113,1.16e-07,23;UBERON:0003295,1.16e-07,23;UBERON:0009722,1.16e-07,23;UBERON:0005562,1.16e-07,23;UBERON:0007690,1.16e-07,23;UBERON:0000077,3.72e-07,35;UBERON:0006562,4.58e-07,24;UBERON:0003408,4.58e-07,24;UBERON:0001557,4.58e-07,24;UBERON:0001042,4.58e-07,24;UBERON:0008814,4.58e-07,24;UBERON:0009145,4.58e-07,24 | |||
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|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.839396359559449,0.934450562382103,2.1950964985068,2.53419699873,3.7450324211519,1.88339765048055,2.31339261086476,1.54080656938085,2.88487327982691,0.333109761815663,0.809901069559304,0,1.10411757875383,1.50825876966313,3.81950686618227,0.425216450755349,1.68794617041505,2.35079810225042,0.799962113967033,1.60586496747019,1.14846392823004,0.430761996159075,1.07735616342945,1.14014051673824,1.00812051903972,0.443461021310609,0.635030673459631,0,0,1.1554064790051,0.498703936075477,0.612508068787107,2.09265815368454,0.7813353445238,1.57057123192139,2.94115744015507,2.73218193983378,1.94204141212461,0.377690453926732,1.01376931219515,2.20256102594018,0.782391344348039,0.872100625521786,0.878744730937887,0.972149495371417,1.39986421625363,1.43752564364972,1.00669563634642,0.725362142011344,2.01656279485478,0.514518872071894,0.85960031981627,2.57836046138721,0.202316460859598,0,0.633831403506179,1.0165335962074,0.889294796111139,1.7997994345628,1.97773272513395,0,1.19840044207362,1.15265491596466,0.207379224616955,0.540023753326763,0.841299845405528,0,1.76694832761291,0.734944795289724,0.575072826109418,0.919218786610021,1.10115880999389,2.17068474744819,1.53606533256243,0.395658863190582,0.731901148819277,1.04182674111352,0.837548997004143,0.56276261003168,0.916789486660861,0.294628585473668,0.711858403995515,1.1183966749518,1.74170244666323,1.36028808192214,2.89864488701678,1.72084775396277,0.679971333707751,2.15881276655127,0.649776417447669,1.34408066129201,1.12355536105401,1.1930122580464,0.259786004602869,1.06001872353102,0.985903938436763,0,0,0,1.94841936910093,0.506719730950197,0,0.79928715803342,0.776813650941515,0.742210695324124,0.346970653532272,0.608930956624282,0.691846491768175,0.60289056221049,0.352766121407114,0.628332956648377,1.23597483867187,0.144599356919912,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,1.17112318804619,0.628340120440365,0.255457055208591,1.67741174308288,1.19980546198682,1.77898317902291,1.3481157546434,0.457500602818626,1.13088916901578,1.04294592115366,1.02286182932132,1.45451631191692,1.1356888414743,0.81471491080253,0.870848794270651,3.0326731012041,0.420883711772948,0.780722657776222,1.14951052216736,0.900310649026746,1.05493372485001,0.95251098811859,0.12811372028485,0.843315521037559,0.776110112217047,1.29340795759705,0.378212160335639,0.527853372491847,1.53437012699302,0.278047249225598,0,0.823128545631774,0.995171334092466,4.91549231119264,3.86021860672073,1.98914449576915,1.03562886267751,0.469052119962192,1.2604344302271,2.13070262026689,0.590292695242212,0.617068451549513,1.39520366850245,0.268273401399619,0.350296027101508,0.658239399653922,0.492502392237286,0.405344047729279,1.02339991197733,0.439100230582101,1.07365135008297,1.47202963994889,0.617427674275707,0.330418782983798,0,1.06644125267617,1.16118335930219,0.77320476793256,1.61346819698674,1.11189021922435,0.380451252225118,0.949058123089023,0.494096864172033,0.251335208800269,0.397912944082302,0.779856348476481,0,0.432276099749388,0.597423819763102,0.758671603812327,0.913988100877831,1.1270773567308,1.22190796707189,0.969762435838129,0.841629838683823,0.316182685621286,0.442830443938806,0.31399745568275,0.493588655687202,1.48226313543574,0.667380422864376,1.17935397067922,0,0.202860121388503,0.482354319504834,0.25462585178142,1.43848068725405,1.13494658742525,0.549122826376163,1.43768206527355,0,0,2.27320990152401,1.25578189465339,1.4473305640901,1.29327233116623,0.568474235311454,1.14075483509418,1.35796068620151,0.938760993154008,1.34005005953453,0.714130922658041,0.780534591431195,0.945810864637146,0.44292937929755,0.956728611944923,1.3109065177259,0.345369963731791,0.433947175744535,1.50791283939272,0.54390568381871,0.491764273019036,1.10374698521893,0.80275294993896,0.468846746368813,0.491804836130026,0.757412781613119,1.57754109708128,0.780877488593277,0.215423397732799,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,1.46127928955656,1.18586333383957,1.28528526568723,0.283880170416537,1.6025904330053,0.977321756121456,0.329940245945071,1.32745138339963,0.242780636154981,0.906970670894253,1.69744571780308,0.590603785761546,0,0.775284879504663,2.18120237686503,0.712994756769443,1.26414703174326,3.16255825724996,0,2.7235168460303,0.720244376125241,0.905510786479282,1.50035924522115,0.886701168211368,0.535106452806212,1.64549020602121,0.913394847343798,1.17335854031855,2.54198485036584,0,0.16488625294148,0.484393280087717,0.542816324353403,0.596861720015682,0,1.7488850197791,1.11255181206306,1.19609616558497,1.03193433981611,0.555583582109135,1.13021074202815,0.683471138605126,0.915112692826091,1.86976272993241,3.07893195112048,2.07299960706636,2.86401185404534,0.158167996790568,0.203319467126849,0.756037385752609,0.627264888043406,0.218362563746178,0.134864346384821,0.578574190077352,1.04702376793612,0.777689839750757,0.621339313086926,1.12738587736838,0.448549638131936,0.330916980914195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| ||
|short_description=p4@Eif1b | |||
}} | }} |
Latest revision as of 08:11, 26 September 2015
Short description: | p4@Eif1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Eif1b_5end |
Coexpression cluster: | NA |
Association with transcript: | 131bp_to_ENSMUST00000007139, NM_026892, uc009scp.2_5end |
EntrezGene: | Eif1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 7.33e-09 | 46 |
mesenchymal cell | 7.33e-09 | 46 |
motile cell | 1.14e-08 | 54 |
hematopoietic cell | 7.23e-08 | 32 |
hematopoietic oligopotent progenitor cell | 7.23e-08 | 32 |
hematopoietic stem cell | 7.23e-08 | 32 |
hematopoietic multipotent progenitor cell | 7.23e-08 | 32 |
T cell | 3.97e-07 | 11 |
pro-T cell | 3.97e-07 | 11 |
lymphoid lineage restricted progenitor cell | 5.67e-07 | 12 |
lymphocyte | 5.97e-07 | 13 |
common lymphoid progenitor | 5.97e-07 | 13 |
leukocyte | 5.98e-07 | 17 |
nongranular leukocyte | 5.98e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.65e-09 | 45 |
blood island | 5.65e-09 | 45 |
connective tissue | 7.33e-09 | 46 |
hemolymphoid system | 1.54e-08 | 48 |
immune system | 1.54e-08 | 48 |
thymus | 1.16e-07 | 23 |
neck | 1.16e-07 | 23 |
respiratory system epithelium | 1.16e-07 | 23 |
hemolymphoid system gland | 1.16e-07 | 23 |
pharyngeal epithelium | 1.16e-07 | 23 |
thymic region | 1.16e-07 | 23 |
pharyngeal gland | 1.16e-07 | 23 |
entire pharyngeal arch endoderm | 1.16e-07 | 23 |
thymus primordium | 1.16e-07 | 23 |
early pharyngeal endoderm | 1.16e-07 | 23 |
mixed endoderm/mesoderm-derived structure | 3.72e-07 | 35 |
pharynx | 4.58e-07 | 24 |
gland of gut | 4.58e-07 | 24 |
upper respiratory tract | 4.58e-07 | 24 |
chordate pharynx | 4.58e-07 | 24 |
pharyngeal arch system | 4.58e-07 | 24 |
pharyngeal region of foregut | 4.58e-07 | 24 |