FFCP PHASE1:Mm9::chrX:45807450..45807478,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:45807450..45807478,-
|short_description=p3@Elf4
|description=CAGE_peak_3_at_Elf4_5end
|association_with_transcript=-104bp_to_ENSMUST00000114958,uc009tce.2_...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56501 | |EntrezGene=56501 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9Z2U4 | |UniProt=Q9Z2U4 | ||
|association_with_transcript=-104bp_to_ENSMUST00000114958,uc009tce.2_5end | |||
|cluster_id=chrX:45807450..45807478,- | |||
|description=CAGE_peak_3_at_Elf4_5end | |||
|id=chrX:45807450..45807478,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.18e-12!59;UBERON:0004119!4.57e-11!130;UBERON:0000925!4.57e-11!130;UBERON:0006595!4.57e-11!130;UBERON:0001007!5.04e-11!128;UBERON:0001555!5.04e-11!128;UBERON:0007026!5.04e-11!128;UBERON:0004921!1.28e-10!126;UBERON:0004185!1.28e-10!126;UBERON:0000160!1.05e-09!43;UBERON:0003081!1.09e-08!88;UBERON:0002193!2.45e-08!48;UBERON:0004177!9.12e-08!29;UBERON:0000926!9.99e-08!193;UBERON:0004120!9.99e-08!193;UBERON:0006603!9.99e-08!193;UBERON:0002390!1.74e-07!45;UBERON:0003061!1.74e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.58e-12,47;UBERON:0000160,9.16e-10,31;UBERON:0000926,9.70e-10,120;UBERON:0004120,9.70e-10,120;UBERON:0006603,9.70e-10,120;UBERON:0001007,1.90e-09,116;UBERON:0001555,1.90e-09,116;UBERON:0007026,1.90e-09,116;UBERON:0004119,2.35e-09,118;UBERON:0000925,2.35e-09,118;UBERON:0006595,2.35e-09,118;UBERON:0004921,4.53e-09,114;UBERON:0002193,1.73e-08,48;UBERON:0002405,1.73e-08,48;UBERON:0003081,3.36e-08,87;UBERON:0004177,4.33e-08,29;UBERON:0005057,4.33e-08,29;UBERON:0002390,1.28e-07,45;UBERON:0003061,1.28e-07,45;UBERON:0000077,3.22e-07,35;UBERON:0002370,9.98e-07,23;UBERON:0000974,9.98e-07,23;UBERON:0004807,9.98e-07,23;UBERON:0005058,9.98e-07,23;UBERON:0003351,9.98e-07,23;UBERON:0009113,9.98e-07,23;UBERON:0003295,9.98e-07,23;UBERON:0009722,9.98e-07,23;UBERON:0005562,9.98e-07,23;UBERON:0007690,9.98e-07,23 | |||
|phase1_expression=0.160148847104794,5.23463111459042,3.18499467572675,4.83942738090928,3.50627010962443,4.19698179779725,2.80335168714631,6.32704284863724,3.09735188733667,5.38348410540585,0.34243593645101,2.31339261086476,5.13602189793617,6.6439505838438,1.66554880907831,3.23960427823721,0.699561878128147,4.41647031501533,4.38766187538364,4.2438965179803,2.12608225377674,3.47518329203099,1.82839852397255,4.7997726838022,2.52350209173887,5.16808767703518,3.87685796543167,3.878482188346,3.04037471130198,6.04872311423834,3.76941868114018,0,0.61506478758457,0,1.44425809875637,1.82858109894342,1.63335485009895,10.8818223991596,8.5946887897618,4.18818995179039,9.99993529652724,15.0270006690858,11.6522484727477,2.01434908760924,1.52065396829272,2.20256102594018,4.69434806608824,1.09012578190223,2.41654801007919,1.74986909166855,2.37976916763116,0,5.20126078778983,2.90144856804538,6.72187598284928,1.28629718017973,1.71920063963254,2.06268836910977,0.202316460859598,0,0,4.74382344896785,2.66788438833342,2.2497492932035,7.9109309005358,3.5524005747305,2.39680088414724,2.30530983192933,0.103689612308478,0,0.210324961351382,0,0,0.367472397644862,0.191690942036473,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0,1.13589289999776,1.058001841495,3.76823835312181,0,0.679971333707751,0,0,0.448026887097336,1.54488862144927,2.21559419351475,2.33807404142582,2.47337702157238,0,0,5.09610479413291,0,0.865964164044856,1.26679932737549,0,1.48439043634778,8.80388804400384,1.63286352971307,3.29622120855658,2.13125834818499,1.84492397804847,2.11011696773672,3.64524992120685,1.63366568728578,2.71914464507811,3.47038456607788,5.30766331169925,4.36770494858005,4.85851340612866,2.90925151881133,5.59175283654366,0.292780797011547,0,5.8755122697976,3.95389910869537,0.599902730993408,2.54140454146129,0.149790639404823,0,0,0,0,0.20778804455956,0,3.86989582631202,2.36373244159177,0,0.210441855886474,0.520481771850815,0.229902104433473,0.900310649026746,1.65775299619287,1.02054748726992,1.15302348256365,0.843315521037559,1.03481348295606,0.215567992932842,0.378212160335639,1.40760899331159,1.97276159184817,3.05851974148158,1.74126083261083,2.05782136407943,2.9855140022774,2.1066395619397,1.80143534980301,1.13665399758237,4.14251545071004,6.3322036194896,3.6012412292203,4.97163944728941,4.9191057936851,3.70241070929708,3.72054311600653,4.29237442239391,4.67061369468678,3.62031669809657,1.31333971263276,2.59420190546738,2.04679982395465,2.85415149878366,2.14730270016595,0,0.102904612379284,7.93005079161115,5.55346189993443,2.55945900642281,2.32236671860439,4.51036114627327,5.84882221407693,5.11469500843202,5.51654315726422,6.16887780007865,5.10566759644434,5.27803938480566,7.75930240960488,6.82374304916921,6.29173586057955,7.78096979548899,5.37681437786791,1.70701110857774,1.37098215131675,2.25415471346161,2.24016460629846,1.16371492300575,2.10407459670956,2.02356918797623,0.738050739898011,0.156998727841375,0.616985819609003,0.889357881261447,1.33476084572875,1.76903095601883,2.02375901146368,2.84004169943904,1.68824011826692,2.29163266603278,2.30156909960649,2.10775794807546,0.823684239564244,2.87536413054709,1.11642284300551,0.624075346229121,0.505157755894224,0.358794827043824,0.482443521363367,5.72734889516475,0.568474235311454,2.44447464663039,2.54617628662782,1.64283173801951,2.1775813467436,2.61848004974615,3.51240566144038,2.52216230569906,2.87904096543407,2.23236676120482,2.94953966488328,2.41758974612254,3.61622646453779,1.50791283939272,3.80733978673097,0.491764273019036,0.551873492609465,0.321101179975584,0,1.14754461763673,2.52470927204373,0,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,1.18586333383957,0,3.12268187458191,3.5613120733451,3.09485222771795,2.3095817216155,0,4.37005145078967,4.83717691143602,3.39489143560617,2.65771703592696,3.99665692327106,6.20227903603731,3.27180356529755,3.20847640546249,3.16036757935816,1.05418608574999,1.03135543248187,0.680879211507576,0.720244376125241,0.646793418913773,0.428674070063185,0.886701168211368,1.78368817602071,0.658196082408484,0,4.4587624532105,0.847328283455281,0.220528398054962,2.4732937941222,4.03661066739764,2.29189114726992,2.38744688006273,1.80554989719567,3.20628920292836,0.18542530201051,4.78438466233988,4.33412422722767,4.62986318424279,2.44878994106098,3.00727300986255,4.34678529092393,3.90950388985867,2.23922323717853,2.76399947608848,2.86401185404534,2.05618395827738,3.86306987541013,3.99619761040665,2.71814784818809,3.05707589244649,3.50647300600534,2.97552440611209,3.14107130380836,6.99920855775682,0.621339313086926,0.56369293868419,2.99033092087958,3.47462829959905,3.88902376688095,2.84151611651008,2.87225413334323,4.5769323071844,4.29674469985035,3.56521771047417,1.44950472495604,0.864090018773596,8.84831137758899,2.22997736819181,2.87590680061516,4.67714962720062,7.16106782669926,6.15912199821921,6.12996792551841,6.20296014133224,8.07731599585181,6.17275133905499,8.57022573663144,7.9915462206597,8.65906574762965,8.41513695707296,1.13365191807606,3.32978930061097,3.85769583420746,2.68615386182526,2.31827512838629,4.31669693537719,3.6630324853453,3.00115730710692,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.62272408550506,1.99512436700516,1.36586884603307,1.21553358534147,2.93458427679175,1.83843508450014,2.44471400581777,1.23621034343337,1.92551525755089,1.51618327058278,2.28131369901216,0.943131706930381,2.1537546718073,3.07320731543373,2.46972516509137,3.33405583898152,1.62238056322798,2.12200142510076,0.412085900803307,2.35518272215036,2.40008476669791,1.95223386775271,1.90748951957857,2.61623549938191,2.07040636913727,2.70766745253365,1.64635175585495,1.31534855718921,1.90125759384206,2.24456908663095,3.6776855618494,2.1670986122624,1.22769312950907,2.47898945897546,2.70069255373598,1.74867404556562,2.10538447600868,2.79332370262788,1.72159498861959,1.10295709559758,3.94175320554716 | |phase1_expression=0.160148847104794,5.23463111459042,3.18499467572675,4.83942738090928,3.50627010962443,4.19698179779725,2.80335168714631,6.32704284863724,3.09735188733667,5.38348410540585,0.34243593645101,2.31339261086476,5.13602189793617,6.6439505838438,1.66554880907831,3.23960427823721,0.699561878128147,4.41647031501533,4.38766187538364,4.2438965179803,2.12608225377674,3.47518329203099,1.82839852397255,4.7997726838022,2.52350209173887,5.16808767703518,3.87685796543167,3.878482188346,3.04037471130198,6.04872311423834,3.76941868114018,0,0.61506478758457,0,1.44425809875637,1.82858109894342,1.63335485009895,10.8818223991596,8.5946887897618,4.18818995179039,9.99993529652724,15.0270006690858,11.6522484727477,2.01434908760924,1.52065396829272,2.20256102594018,4.69434806608824,1.09012578190223,2.41654801007919,1.74986909166855,2.37976916763116,0,5.20126078778983,2.90144856804538,6.72187598284928,1.28629718017973,1.71920063963254,2.06268836910977,0.202316460859598,0,0,4.74382344896785,2.66788438833342,2.2497492932035,7.9109309005358,3.5524005747305,2.39680088414724,2.30530983192933,0.103689612308478,0,0.210324961351382,0,0,0.367472397644862,0.191690942036473,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0,1.13589289999776,1.058001841495,3.76823835312181,0,0.679971333707751,0,0,0.448026887097336,1.54488862144927,2.21559419351475,2.33807404142582,2.47337702157238,0,0,5.09610479413291,0,0.865964164044856,1.26679932737549,0,1.48439043634778,8.80388804400384,1.63286352971307,3.29622120855658,2.13125834818499,1.84492397804847,2.11011696773672,3.64524992120685,1.63366568728578,2.71914464507811,3.47038456607788,5.30766331169925,4.36770494858005,4.85851340612866,2.90925151881133,5.59175283654366,0.292780797011547,0,5.8755122697976,3.95389910869537,0.599902730993408,2.54140454146129,0.149790639404823,0,0,0,0,0.20778804455956,0,3.86989582631202,2.36373244159177,0,0.210441855886474,0.520481771850815,0.229902104433473,0.900310649026746,1.65775299619287,1.02054748726992,1.15302348256365,0.843315521037559,1.03481348295606,0.215567992932842,0.378212160335639,1.40760899331159,1.97276159184817,3.05851974148158,1.74126083261083,2.05782136407943,2.9855140022774,2.1066395619397,1.80143534980301,1.13665399758237,4.14251545071004,6.3322036194896,3.6012412292203,4.97163944728941,4.9191057936851,3.70241070929708,3.72054311600653,4.29237442239391,4.67061369468678,3.62031669809657,1.31333971263276,2.59420190546738,2.04679982395465,2.85415149878366,2.14730270016595,0,0.102904612379284,7.93005079161115,5.55346189993443,2.55945900642281,2.32236671860439,4.51036114627327,5.84882221407693,5.11469500843202,5.51654315726422,6.16887780007865,5.10566759644434,5.27803938480566,7.75930240960488,6.82374304916921,6.29173586057955,7.78096979548899,5.37681437786791,1.70701110857774,1.37098215131675,2.25415471346161,2.24016460629846,1.16371492300575,2.10407459670956,2.02356918797623,0.738050739898011,0.156998727841375,0.616985819609003,0.889357881261447,1.33476084572875,1.76903095601883,2.02375901146368,2.84004169943904,1.68824011826692,2.29163266603278,2.30156909960649,2.10775794807546,0.823684239564244,2.87536413054709,1.11642284300551,0.624075346229121,0.505157755894224,0.358794827043824,0.482443521363367,5.72734889516475,0.568474235311454,2.44447464663039,2.54617628662782,1.64283173801951,2.1775813467436,2.61848004974615,3.51240566144038,2.52216230569906,2.87904096543407,2.23236676120482,2.94953966488328,2.41758974612254,3.61622646453779,1.50791283939272,3.80733978673097,0.491764273019036,0.551873492609465,0.321101179975584,0,1.14754461763673,2.52470927204373,0,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,1.18586333383957,0,3.12268187458191,3.5613120733451,3.09485222771795,2.3095817216155,0,4.37005145078967,4.83717691143602,3.39489143560617,2.65771703592696,3.99665692327106,6.20227903603731,3.27180356529755,3.20847640546249,3.16036757935816,1.05418608574999,1.03135543248187,0.680879211507576,0.720244376125241,0.646793418913773,0.428674070063185,0.886701168211368,1.78368817602071,0.658196082408484,0,4.4587624532105,0.847328283455281,0.220528398054962,2.4732937941222,4.03661066739764,2.29189114726992,2.38744688006273,1.80554989719567,3.20628920292836,0.18542530201051,4.78438466233988,4.33412422722767,4.62986318424279,2.44878994106098,3.00727300986255,4.34678529092393,3.90950388985867,2.23922323717853,2.76399947608848,2.86401185404534,2.05618395827738,3.86306987541013,3.99619761040665,2.71814784818809,3.05707589244649,3.50647300600534,2.97552440611209,3.14107130380836,6.99920855775682,0.621339313086926,0.56369293868419,2.99033092087958,3.47462829959905,3.88902376688095,2.84151611651008,2.87225413334323,4.5769323071844,4.29674469985035,3.56521771047417,1.44950472495604,0.864090018773596,8.84831137758899,2.22997736819181,2.87590680061516,4.67714962720062,7.16106782669926,6.15912199821921,6.12996792551841,6.20296014133224,8.07731599585181,6.17275133905499,8.57022573663144,7.9915462206597,8.65906574762965,8.41513695707296,1.13365191807606,3.32978930061097,3.85769583420746,2.68615386182526,2.31827512838629,4.31669693537719,3.6630324853453,3.00115730710692,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.62272408550506,1.99512436700516,1.36586884603307,1.21553358534147,2.93458427679175,1.83843508450014,2.44471400581777,1.23621034343337,1.92551525755089,1.51618327058278,2.28131369901216,0.943131706930381,2.1537546718073,3.07320731543373,2.46972516509137,3.33405583898152,1.62238056322798,2.12200142510076,0.412085900803307,2.35518272215036,2.40008476669791,1.95223386775271,1.90748951957857,2.61623549938191,2.07040636913727,2.70766745253365,1.64635175585495,1.31534855718921,1.90125759384206,2.24456908663095,3.6776855618494,2.1670986122624,1.22769312950907,2.47898945897546,2.70069255373598,1.74867404556562,2.10538447600868,2.79332370262788,1.72159498861959,1.10295709559758,3.94175320554716 | ||
|short_description=p3@Elf4 | |||
}} | }} |
Latest revision as of 21:09, 1 October 2015
Short description: | p3@Elf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Elf4_5end |
Coexpression cluster: | NA |
Association with transcript: | -104bp_to_ENSMUST00000114958, uc009tce.2_5end |
EntrezGene: | Elf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.58e-12 | 47 |
intestine | 9.16e-10 | 31 |
mesoderm | 9.70e-10 | 120 |
mesoderm-derived structure | 9.70e-10 | 120 |
presumptive mesoderm | 9.70e-10 | 120 |
digestive system | 1.90e-09 | 116 |
digestive tract | 1.90e-09 | 116 |
primitive gut | 1.90e-09 | 116 |
endoderm-derived structure | 2.35e-09 | 118 |
endoderm | 2.35e-09 | 118 |
presumptive endoderm | 2.35e-09 | 118 |
subdivision of digestive tract | 4.53e-09 | 114 |
hemolymphoid system | 1.73e-08 | 48 |
immune system | 1.73e-08 | 48 |
lateral plate mesoderm | 3.36e-08 | 87 |
hemopoietic organ | 4.33e-08 | 29 |
immune organ | 4.33e-08 | 29 |
hematopoietic system | 1.28e-07 | 45 |
blood island | 1.28e-07 | 45 |
mixed endoderm/mesoderm-derived structure | 3.22e-07 | 35 |
thymus | 9.98e-07 | 23 |
neck | 9.98e-07 | 23 |
respiratory system epithelium | 9.98e-07 | 23 |
hemolymphoid system gland | 9.98e-07 | 23 |
pharyngeal epithelium | 9.98e-07 | 23 |
thymic region | 9.98e-07 | 23 |
pharyngeal gland | 9.98e-07 | 23 |
entire pharyngeal arch endoderm | 9.98e-07 | 23 |
thymus primordium | 9.98e-07 | 23 |
early pharyngeal endoderm | 9.98e-07 | 23 |