FFCP PHASE1:Mm9::chrX:50265409..50265538,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:50265409..50265538,+
|short_description=p1@Phf6
|description=CAGE_peak_1_at_Phf6_5end
|association_with_transcript=0bp_to_ENSMUST00000078944,ENSMUST0000010...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=70998 | |EntrezGene=70998 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=770 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D4J7,E9QAG2 | |UniProt=Q9D4J7,E9QAG2 | ||
|association_with_transcript=0bp_to_ENSMUST00000078944,ENSMUST00000101587,ENSMUST00000154864,NM_027642,uc009ten.1,uc009teo.1,uc009tep.1,uc009teq.1_5end | |||
|cluster_id=chrX:50265409..50265538,+ | |||
|description=CAGE_peak_1_at_Phf6_5end | |||
|id=chrX:50265409..50265538,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.42e-08!13;CL:0000051!3.42e-08!13;CL:0000838!1.38e-07!12;CL:0000084!2.05e-07!11;CL:0000827!2.05e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.42e-08,13;CL:0000051,3.42e-08,13;CL:0000838,1.38e-07,12;CL:0000084,2.05e-07,11;CL:0000827,2.05e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.07e-09!94;UBERON:0004177!8.67e-08!29;UBERON:0002370!1.25e-07!23;UBERON:0000974!1.25e-07!23;UBERON:0004807!1.25e-07!23;UBERON:0005058!1.25e-07!23;UBERON:0003351!1.25e-07!23;UBERON:0009113!1.25e-07!23;UBERON:0003295!1.25e-07!23;UBERON:0009722!1.25e-07!23;UBERON:0005562!1.25e-07!23;UBERON:0007690!1.25e-07!23;UBERON:0007811!2.59e-07!86;UBERON:0003408!5.10e-07!24;UBERON:0006562!5.30e-07!24;UBERON:0001557!5.30e-07!24;UBERON:0001042!5.30e-07!24;UBERON:0008814!5.30e-07!24;UBERON:0009145!5.30e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.29e-10,43;UBERON:0007811,2.78e-08,36;UBERON:0004177,8.67e-08,29;UBERON:0005057,8.67e-08,29;UBERON:0002370,1.25e-07,23;UBERON:0000974,1.25e-07,23;UBERON:0004807,1.25e-07,23;UBERON:0005058,1.25e-07,23;UBERON:0003351,1.25e-07,23;UBERON:0009113,1.25e-07,23;UBERON:0003295,1.25e-07,23;UBERON:0009722,1.25e-07,23;UBERON:0005562,1.25e-07,23;UBERON:0007690,1.25e-07,23;UBERON:0003408,5.10e-07,24;UBERON:0006562,5.30e-07,24;UBERON:0001557,5.30e-07,24;UBERON:0001042,5.30e-07,24;UBERON:0008814,5.30e-07,24;UBERON:0009145,5.30e-07,24 | |||
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| ||
|short_description=p1@Phf6 | |||
}} | }} |
Latest revision as of 21:35, 1 October 2015
Short description: | p1@Phf6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Phf6_5end |
Coexpression cluster: | MCL_coexpression_mm9:770 |
Association with transcript: | 0bp_to_ENSMUST00000078944, ENSMUST00000101587, ENSMUST00000154864, NM_027642, uc009ten.1, uc009teo.1, uc009tep.1, uc009teq.1_5end |
EntrezGene: | Phf6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.42e-08 | 13 |
common lymphoid progenitor | 3.42e-08 | 13 |
lymphoid lineage restricted progenitor cell | 1.38e-07 | 12 |
T cell | 2.05e-07 | 11 |
pro-T cell | 2.05e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 1.29e-10 | 43 |
craniocervical region | 2.78e-08 | 36 |
hemopoietic organ | 8.67e-08 | 29 |
immune organ | 8.67e-08 | 29 |
thymus | 1.25e-07 | 23 |
neck | 1.25e-07 | 23 |
respiratory system epithelium | 1.25e-07 | 23 |
hemolymphoid system gland | 1.25e-07 | 23 |
pharyngeal epithelium | 1.25e-07 | 23 |
thymic region | 1.25e-07 | 23 |
pharyngeal gland | 1.25e-07 | 23 |
entire pharyngeal arch endoderm | 1.25e-07 | 23 |
thymus primordium | 1.25e-07 | 23 |
early pharyngeal endoderm | 1.25e-07 | 23 |
gland of gut | 5.10e-07 | 24 |
pharynx | 5.30e-07 | 24 |
upper respiratory tract | 5.30e-07 | 24 |
chordate pharynx | 5.30e-07 | 24 |
pharyngeal arch system | 5.30e-07 | 24 |
pharyngeal region of foregut | 5.30e-07 | 24 |