FFCP PHASE1:Mm9::chrX:57401072..57401079,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:57401072..57401079,-
|short_description=p5@Mcf2
|description=CAGE_peak_5_at_Mcf2_5end
|association_with_transcript=-195bp_to_ENSMUST00000101531_5end
|Entr...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=109904 | |EntrezGene=109904 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C067 | |UniProt=Q8C067 | ||
|association_with_transcript=-195bp_to_ENSMUST00000101531_5end | |||
|cluster_id=chrX:57401072..57401079,- | |||
|description=CAGE_peak_5_at_Mcf2_5end | |||
|id=chrX:57401072..57401079,- | |||
|ontology_enrichment_celltype=CL:0002614!3.52e-09!3;CL:0000117!7.78e-07!23;CL:0000337!7.78e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.15e-26!52;UBERON:0005068!9.15e-26!52;UBERON:0006241!9.15e-26!52;UBERON:0007135!9.15e-26!52;UBERON:0002616!7.69e-23!49;UBERON:0000955!2.71e-22!50;UBERON:0006238!2.71e-22!50;UBERON:0001017!8.64e-21!73;UBERON:0005743!8.64e-21!73;UBERON:0000073!4.23e-20!75;UBERON:0001016!4.23e-20!75;UBERON:0002346!2.14e-19!71;UBERON:0003075!2.14e-19!71;UBERON:0007284!2.14e-19!71;UBERON:0000033!1.29e-18!63;UBERON:0002020!2.33e-18!34;UBERON:0002298!4.32e-18!6;UBERON:0003080!1.52e-15!40;UBERON:0004121!8.57e-15!102;UBERON:0000924!8.57e-15!102;UBERON:0006601!8.57e-15!102;UBERON:0002791!2.22e-14!29;UBERON:0003528!2.22e-14!29;UBERON:0001893!2.22e-14!29;UBERON:0002780!8.47e-14!39;UBERON:0001890!8.47e-14!39;UBERON:0006240!8.47e-14!39;UBERON:0003056!8.57e-14!49;UBERON:0007811!2.19e-12!86;UBERON:0002950!4.26e-12!4;UBERON:0001891!4.26e-12!4;UBERON:0009616!4.26e-12!4;UBERON:0003076!1.33e-11!12;UBERON:0003057!1.33e-11!12;UBERON:0000153!6.20e-11!94;UBERON:0002021!2.65e-10!10;UBERON:0000411!2.65e-10!10;UBERON:0001950!2.65e-10!10;UBERON:0000956!7.12e-10!21;UBERON:0001869!7.12e-10!21;UBERON:0000203!7.12e-10!21;UBERON:0002619!8.38e-10!17;UBERON:0002038!3.52e-09!3;UBERON:0002308!3.52e-09!3;UBERON:0009663!3.52e-09!3;UBERON:0009661!3.52e-09!3;UBERON:0006331!3.52e-09!3;UBERON:0000125!3.52e-09!3;UBERON:0000025!3.97e-09!114;UBERON:0004111!3.26e-08!122;UBERON:0002240!7.07e-08!6;UBERON:0005174!7.07e-08!6;UBERON:0001137!7.07e-08!6;UBERON:0001896!1.22e-07!2;UBERON:0005290!1.22e-07!2;UBERON:0010096!1.22e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.55e-44,2;UBERON:0002298,4.55e-44,2;UBERON:0005290,4.55e-44,2;UBERON:0010096,4.55e-44,2;UBERON:0003076,3.40e-17,12;UBERON:0003057,3.40e-17,12;UBERON:0004733,1.58e-15,6;UBERON:0004732,1.58e-15,6;UBERON:0002028,1.58e-15,6;UBERON:0007277,1.58e-15,6;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.893811366596314,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0.898743836428936,0,0.251308704225729,0.869121600961382,0.511430914660661,0.41557608911912,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.893811366596314,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0.898743836428936,0,0.251308704225729,0.869121600961382,0.511430914660661,0.41557608911912,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p5@Mcf2 | |||
}} | }} |
Latest revision as of 22:30, 1 October 2015
Short description: | p5@Mcf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Mcf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -195bp_to_ENSMUST00000101531_5end |
EntrezGene: | Mcf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 4.55e-44 | 2 |
brainstem | 4.55e-44 | 2 |
myelencephalon | 4.55e-44 | 2 |
future myelencephalon | 4.55e-44 | 2 |
posterior neural tube | 3.40e-17 | 12 |
chordal neural plate | 3.40e-17 | 12 |
segmental subdivision of hindbrain | 1.58e-15 | 6 |
segmental subdivision of nervous system | 1.58e-15 | 6 |
hindbrain | 1.58e-15 | 6 |
presumptive hindbrain | 1.58e-15 | 6 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |