FFCP PHASE1:Hg19::chr10:696000..696035,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:696000..696035,+ to FFCP PHASE1:Hg19::chr10:696000..696035,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=414235 | |EntrezGene=414235 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30724 | |HGNC=30724 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VXK3 | |UniProt=Q5VXK3 | ||
|association_with_transcript=0bp_to_ENST00000381489,NR_027152,uc001ifr.2_5end | |||
|cluster_id=chr10:696000..696035,+ | |||
|description=CAGE_peak_2_at_C10orf108_5end | |||
|id=chr10:696000..696035,+ | |||
|ontology_enrichment_celltype=CL:0005020!2.07e-07!6;CL:0002138!2.07e-07!6;CL:0005022!2.07e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002138;3.43e-09;6!CL:0000182;5.12e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.71e-09,12;CL:0005020,3.86e-09,6;CL:0002138,3.86e-09,6;CL:0005022,3.86e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.72e-16;31!UBERON:0009497;3.72e-14;13!UBERON:0004161;2.47e-13;11!CL:0005022;3.43e-09;6!UBERON:0006603;2.53e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.38e-08;3!DOID:127;9.38e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.57e-08,3;DOID:127,8.57e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.22e-25!115;UBERON:0005409!1.14e-12!35;UBERON:0004921!1.20e-11!129;UBERON:0004185!1.20e-11!129;UBERON:0000160!1.55e-10!27;UBERON:0004111!1.61e-10!241;UBERON:0000481!2.55e-09!347;UBERON:0001007!5.62e-09!155;UBERON:0001555!5.62e-09!155;UBERON:0007026!5.62e-09!155;UBERON:0005172!1.13e-08!55;UBERON:0005173!1.13e-08!55;UBERON:0000468!1.58e-08!659;UBERON:0000477!1.61e-08!286;UBERON:0000466!2.25e-08!126;UBERON:0000059!3.93e-08!11;UBERON:0000062!7.16e-08!511;UBERON:0000025!9.51e-08!194;UBERON:0002417!9.54e-08!61;UBERON:0000916!9.54e-08!61;UBERON:0004119!1.64e-07!169;UBERON:0000925!1.64e-07!169;UBERON:0006595!1.64e-07!169;UBERON:0005177!1.89e-07!107;UBERON:0003929!3.66e-07!54;UBERON:0009854!3.66e-07!23;UBERON:0009856!6.78e-07!26;UBERON:0000483!8.00e-07!309;UBERON:0000467!8.16e-07!625;UBERON:0000480!9.54e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.98e-13;22!UBERON:0000160;5.14e-12;17!UBERON:0002423;1.85e-11;25!UBERON:0004921;5.84e-09;33!UBERON:0002107;7.82e-09;19!UBERON:0006925;7.82e-09;19!UBERON:0003978;1.49e-08;3!UBERON:0000946;1.49e-08;3!UBERON:0002108;5.75e-08;4!UBERON:0004175;1.83e-07;21!UBERON:0001473;8.27e-07;8!UBERON:0004536;8.27e-07;8!UBERON:0006558;8.27e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.81e-14,114;UBERON:0000160,3.64e-12,17;UBERON:0009497,9.26e-12,25;UBERON:0000015,9.26e-12,25;UBERON:0002423,9.26e-12,25;UBERON:0006235,9.26e-12,25;UBERON:0004161,9.26e-12,25;UBERON:0008835,2.05e-11,22;UBERON:0003894,2.05e-11,22;UBERON:0005409,2.97e-11,25;UBERON:0009854,8.28e-11,23;UBERON:0007499,9.63e-10,25;UBERON:0009856,2.84e-09,26;UBERON:0002107,5.37e-09,19;UBERON:0006925,5.37e-09,19;UBERON:0008836,5.37e-09,19;UBERON:0004921,8.40e-09,118;UBERON:0003978,1.24e-08,3;UBERON:0009751,1.24e-08,3;UBERON:0000946,1.24e-08,3;UBERON:0002523,1.24e-08,3;UBERON:0005983,1.24e-08,3;UBERON:0002165,1.24e-08,3;UBERON:0002062,1.24e-08,3;UBERON:0007280,1.24e-08,3;UBERON:0002108,4.88e-08,4;UBERON:0003929,7.30e-07,54;UBERON:0001473,9.00e-07,8;UBERON:0004536,9.00e-07,8;UBERON:0006558,9.00e-07,8 | |||
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| ||
|short_description=p2@C10orf108 | |||
}} | }} |
Latest revision as of 22:15, 18 September 2015
Short description: | p2@C10orf108 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C10orf108_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000381489, NR_027152, uc001ifr.2_5end |
EntrezGene: | C10orf108 |
HGNC: | 30724 |
UniProt: | Q5VXK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.71e-09 | 12 |
lymphangioblast | 3.86e-09 | 6 |
endothelial cell of lymphatic vessel | 3.86e-09 | 6 |
vascular lymphangioblast | 3.86e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.81e-14 | 114 |
intestine | 3.64e-12 | 17 |
epithelium of foregut-midgut junction | 9.26e-12 | 25 |
anatomical boundary | 9.26e-12 | 25 |
hepatobiliary system | 9.26e-12 | 25 |
foregut-midgut junction | 9.26e-12 | 25 |
septum transversum | 9.26e-12 | 25 |
hepatic diverticulum | 2.05e-11 | 22 |
liver primordium | 2.05e-11 | 22 |
gastrointestinal system | 2.97e-11 | 25 |
digestive tract diverticulum | 8.28e-11 | 23 |
epithelial sac | 9.63e-10 | 25 |
sac | 2.84e-09 | 26 |
liver | 5.37e-09 | 19 |
digestive gland | 5.37e-09 | 19 |
liver bud | 5.37e-09 | 19 |
subdivision of digestive tract | 8.40e-09 | 118 |
valve | 1.24e-08 | 3 |
cardiac mesenchyme | 1.24e-08 | 3 |
cardial valve | 1.24e-08 | 3 |
tunica intima | 1.24e-08 | 3 |
heart layer | 1.24e-08 | 3 |
endocardium | 1.24e-08 | 3 |
endocardial cushion | 1.24e-08 | 3 |
presumptive endocardium | 1.24e-08 | 3 |
small intestine | 4.88e-08 | 4 |
gut epithelium | 7.30e-07 | 54 |
lymphatic vessel | 9.00e-07 | 8 |
lymph vasculature | 9.00e-07 | 8 |
lymphatic part of lymphoid system | 9.00e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.57e-08 | 3 |
leiomyoma | 8.57e-08 | 3 |