FFCP PHASE1:Hg19::chr11:33279249..33279284,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:33279249..33279284,+ to FFCP PHASE1:Hg19::chr11:33279249..33279284,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10114 | |EntrezGene=10114 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4915 | |HGNC=4915 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H422 | |UniProt=Q9H422 | ||
|association_with_transcript=81bp_to_NM_001048200,NM_005734,uc001mul.1,uc001mum.1_5end | |||
|cluster_id=chr11:33279249..33279284,+ | |||
|description=CAGE_peak_5_at_HIPK3_5end | |||
|id=chr11:33279249..33279284,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.93e-38!172;CL:0000566!1.93e-38!172;CL:0002032!1.57e-35!165;CL:0000837!1.57e-35!165;CL:0000738!1.65e-35!140;CL:0000988!3.02e-34!182;CL:0000763!6.83e-30!112;CL:0000049!6.83e-30!112;CL:0002031!1.34e-27!124;CL:0000766!1.52e-26!76;CL:0002087!1.61e-25!119;CL:0000557!1.05e-24!71;CL:0002057!8.55e-22!42;CL:0000839!1.50e-21!70;CL:0002009!2.61e-21!65;CL:0000860!5.72e-21!45;CL:0002194!2.90e-20!63;CL:0000576!2.90e-20!63;CL:0000040!2.90e-20!63;CL:0000559!2.90e-20!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.88e-22;33!CL:0002057;6.88e-22;33!CL:0000473;2.97e-18;39!CL:0000234;2.97e-18;39!CL:0000576;4.43e-16;48!CL:0000766;8.96e-15;69!CL:0000763;3.71e-10;100!CL:0002087;1.24e-09;104!CL:0000738;7.80e-09;136!CL:0000988;2.19e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.76e-45,168;CL:0000738,2.01e-42,136;CL:0000988,3.05e-41,177;CL:0002032,3.80e-41,161;CL:0000837,3.80e-41,161;CL:0000763,2.97e-35,108;CL:0000049,2.97e-35,108;CL:0000766,1.89e-32,72;CL:0002031,2.39e-32,120;CL:0000557,4.67e-30,67;CL:0002087,1.21e-29,115;CL:0000473,4.24e-28,48;CL:0000234,4.24e-28,48;CL:0000860,4.34e-28,42;CL:0002057,4.34e-28,42;CL:0000839,3.29e-26,66;CL:0002009,1.24e-25,61;CL:0002194,2.84e-24,59;CL:0000576,2.84e-24,59;CL:0000040,2.84e-24,59;CL:0000559,2.84e-24,59;CL:0000838,5.24e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-19;42!CL:0000049;5.35e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.09e-24!102;UBERON:0003061!6.09e-24!102;UBERON:0002193!1.70e-22!112;UBERON:0002371!1.41e-19!80;UBERON:0001474!4.81e-16!86;UBERON:0007023!2.18e-14!115;UBERON:0002405!4.65e-13!115;UBERON:0004765!1.32e-11!101;UBERON:0001434!1.32e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.96e-30,98;UBERON:0003061,1.96e-30,98;UBERON:0002193,3.87e-28,108;UBERON:0002371,5.63e-26,76;UBERON:0002405,1.05e-23,93;UBERON:0001474,3.56e-22,82;UBERON:0004765,5.33e-18,90;UBERON:0001434,6.61e-15,100;UBERON:0003081,2.88e-10,203;UBERON:0007023,8.57e-10,114 | |||
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| ||
|short_description=p5@HIPK3 | |||
}} | }} |
Latest revision as of 16:26, 17 September 2015
Short description: | p5@HIPK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HIPK3_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_NM_001048200, NM_005734, uc001mul.1, uc001mum.1_5end |
EntrezGene: | HIPK3 |
HGNC: | 4915 |
UniProt: | Q9H422 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.76e-45 | 168 |
leukocyte | 2.01e-42 | 136 |
hematopoietic cell | 3.05e-41 | 177 |
hematopoietic oligopotent progenitor cell | 3.80e-41 | 161 |
hematopoietic multipotent progenitor cell | 3.80e-41 | 161 |
myeloid cell | 2.97e-35 | 108 |
common myeloid progenitor | 2.97e-35 | 108 |
myeloid leukocyte | 1.89e-32 | 72 |
hematopoietic lineage restricted progenitor cell | 2.39e-32 | 120 |
granulocyte monocyte progenitor cell | 4.67e-30 | 67 |
nongranular leukocyte | 1.21e-29 | 115 |
defensive cell | 4.24e-28 | 48 |
phagocyte | 4.24e-28 | 48 |
classical monocyte | 4.34e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.34e-28 | 42 |
myeloid lineage restricted progenitor cell | 3.29e-26 | 66 |
macrophage dendritic cell progenitor | 1.24e-25 | 61 |
monopoietic cell | 2.84e-24 | 59 |
monocyte | 2.84e-24 | 59 |
monoblast | 2.84e-24 | 59 |
promonocyte | 2.84e-24 | 59 |
lymphoid lineage restricted progenitor cell | 5.24e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.96e-30 | 98 |
blood island | 1.96e-30 | 98 |
hemolymphoid system | 3.87e-28 | 108 |
bone marrow | 5.63e-26 | 76 |
immune system | 1.05e-23 | 93 |
bone element | 3.56e-22 | 82 |
skeletal element | 5.33e-18 | 90 |
skeletal system | 6.61e-15 | 100 |
lateral plate mesoderm | 2.88e-10 | 203 |
adult organism | 8.57e-10 | 114 |