FFCP PHASE1:Hg19::chr11:35211471..35211506,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:35211471..35211506,- to FFCP PHASE1:Hg19::chr11:35211471..35211506,-: NSchange) |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:35211471..35211506,- | |||
|description=CAGE_peak_at_chr11:35211471..35211506,- | |||
|id=chr11:35211471..35211506,- | |||
|ontology_enrichment_celltype=CL:0002371!2.42e-12!591;CL:0002009!6.15e-12!65;CL:0002194!9.22e-12!63;CL:0000576!9.22e-12!63;CL:0000040!9.22e-12!63;CL:0000559!9.22e-12!63;CL:0000003!2.43e-11!722;CL:0000548!3.56e-11!679;CL:0000004!3.56e-11!679;CL:0000255!3.56e-11!679;CL:0000055!6.19e-11!180;CL:0002057!7.65e-11!42;CL:0000012!1.17e-10!682;CL:0000557!1.28e-10!71;CL:0000144!2.54e-10!625;CL:0000839!4.78e-10!70;CL:0000860!6.64e-10!45;CL:0000766!2.74e-09!76;CL:0000192!7.14e-07!42;CL:0000514!7.14e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-10;33!CL:0002057;1.41e-10;33!CL:0000473;4.37e-10;39!CL:0000234;4.37e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.15e-12,59;CL:0000576,2.15e-12,59;CL:0000040,2.15e-12,59;CL:0000559,2.15e-12,59;CL:0000473,2.67e-12,48;CL:0000234,2.67e-12,48;CL:0002009,2.79e-12,61;CL:0000557,3.70e-11,67;CL:0000860,4.89e-11,42;CL:0002057,4.89e-11,42;CL:0000839,9.63e-11,66;CL:0000766,8.58e-10,72;CL:0000723,2.14e-08,433;CL:0000048,4.37e-08,427;CL:0000034,3.67e-07,441;CL:0002620,9.19e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;5.46e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!7.42e-13!167;UBERON:0002371!7.05e-10!80;UBERON:0002390!3.51e-09!102;UBERON:0003061!3.51e-09!102;UBERON:0003102!5.29e-08!95;UBERON:0001474!7.72e-08!86;UBERON:0004765!8.59e-08!101;UBERON:0001434!8.59e-08!101;UBERON:0002193!3.78e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.66e-13,167;UBERON:0002371,2.23e-10,76;UBERON:0004765,3.29e-09,90;UBERON:0001474,2.03e-08,82;UBERON:0001434,2.13e-08,100;UBERON:0003102,2.17e-08,99;UBERON:0002390,2.34e-08,98;UBERON:0003061,2.34e-08,98;UBERON:0002405,5.09e-07,93;UBERON:0002193,6.61e-07,108 | |||
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| ||
|short_description=p@chr11:35211471..35211506,- | |||
}} | }} |
Latest revision as of 21:51, 23 July 2015
Short description: | p@chr11:35211471..35211506, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:35211471..35211506, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.15e-12 | 59 |
monocyte | 2.15e-12 | 59 |
monoblast | 2.15e-12 | 59 |
promonocyte | 2.15e-12 | 59 |
defensive cell | 2.67e-12 | 48 |
phagocyte | 2.67e-12 | 48 |
macrophage dendritic cell progenitor | 2.79e-12 | 61 |
granulocyte monocyte progenitor cell | 3.70e-11 | 67 |
classical monocyte | 4.89e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.89e-11 | 42 |
myeloid lineage restricted progenitor cell | 9.63e-11 | 66 |
myeloid leukocyte | 8.58e-10 | 72 |
somatic stem cell | 2.14e-08 | 433 |
multi fate stem cell | 4.37e-08 | 427 |
stem cell | 3.67e-07 | 441 |
skin fibroblast | 9.19e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.66e-13 | 167 |
bone marrow | 2.23e-10 | 76 |
skeletal element | 3.29e-09 | 90 |
bone element | 2.03e-08 | 82 |
skeletal system | 2.13e-08 | 100 |
surface structure | 2.17e-08 | 99 |
hematopoietic system | 2.34e-08 | 98 |
blood island | 2.34e-08 | 98 |
immune system | 5.09e-07 | 93 |
hemolymphoid system | 6.61e-07 | 108 |