FFCP PHASE1:Hg19::chr11:66675339..66675357,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:66675339..66675357,- to FFCP PHASE1:Hg19::chr11:66675339..66675357,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5091 | |EntrezGene=5091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8636 | |HGNC=8636 | ||
|TSSclassifier=strong | |||
|UniProt=P11498 | |UniProt=P11498 | ||
|association_with_transcript=0bp_to_NM_022172,uc001ojn.1_5end | |||
|cluster_id=chr11:66675339..66675357,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_PC_5end | |||
|id=chr11:66675339..66675357,- | |||
|ontology_enrichment_celltype=CL:0000136!4.08e-09!15;CL:0000181!2.11e-07!12;CL:0000417!2.11e-07!12;CL:0000668!2.11e-07!12;CL:0000414!2.11e-07!12;CL:0000412!2.11e-07!12;CL:0000182!2.11e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.54e-28;13!CL:0002549;1.37e-12;2!CL:0000182;1.46e-12;12!CL:0002575;2.47e-12;2!CL:0002521;5.97e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.58e-24,15;CL:0002549,1.08e-12,2;CL:0000182,1.36e-12,12;CL:0002575,3.12e-12,2;CL:0002521,5.40e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.44e-09;11!UBERON:0009497;1.28e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-26!115;UBERON:0002616!1.09e-24!59;UBERON:0001049!4.40e-22!57;UBERON:0005068!4.40e-22!57;UBERON:0006241!4.40e-22!57;UBERON:0007135!4.40e-22!57;UBERON:0000955!4.89e-22!69;UBERON:0006238!4.89e-22!69;UBERON:0001017!1.05e-20!82;UBERON:0003075!1.21e-20!86;UBERON:0007284!1.21e-20!86;UBERON:0005743!1.27e-20!86;UBERON:0002346!3.22e-19!90;UBERON:0000073!1.28e-17!94;UBERON:0001016!1.28e-17!94;UBERON:0003080!1.38e-15!42;UBERON:0000033!1.86e-15!123;UBERON:0000153!5.58e-15!129;UBERON:0007811!5.58e-15!129;UBERON:0002780!2.42e-14!41;UBERON:0001890!2.42e-14!41;UBERON:0006240!2.42e-14!41;UBERON:0002298!4.43e-14!8;UBERON:0003056!3.31e-13!61;UBERON:0002107!1.98e-12!19;UBERON:0006925!1.98e-12!19;UBERON:0008836!1.98e-12!19;UBERON:0000475!1.48e-11!365;UBERON:0002020!1.49e-11!34;UBERON:0003528!1.49e-11!34;UBERON:0009854!2.45e-11!23;UBERON:0001893!2.58e-11!34;UBERON:0000477!4.09e-11!286;UBERON:0005057!7.48e-11!26;UBERON:0004121!1.68e-10!169;UBERON:0002791!1.79e-10!33;UBERON:0008835!2.77e-10!22;UBERON:0003894!2.77e-10!22;UBERON:0009497!3.07e-10!25;UBERON:0000015!3.07e-10!25;UBERON:0002423!3.07e-10!25;UBERON:0006235!3.07e-10!25;UBERON:0004161!3.07e-10!25;UBERON:0000924!5.53e-10!173;UBERON:0006601!5.53e-10!173;UBERON:0009856!1.28e-09!26;UBERON:0001869!3.22e-09!32;UBERON:0000025!5.42e-09!194;UBERON:0000481!6.87e-09!347;UBERON:0007499!1.15e-08!25;UBERON:0004111!1.28e-08!241;UBERON:0004733!5.03e-08!12;UBERON:0002028!5.03e-08!12;UBERON:0007277!5.03e-08!12;UBERON:0002619!6.66e-08!22;UBERON:0003076!8.66e-08!15;UBERON:0003057!8.66e-08!15;UBERON:0002365!1.50e-07!31;UBERON:0002330!1.50e-07!31;UBERON:0001950!2.25e-07!20;UBERON:0002368!2.65e-07!35;UBERON:0004732!2.73e-07!13;UBERON:0002308!3.81e-07!9;UBERON:0000125!3.81e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.31e-19;19!UBERON:0006925;2.31e-19;19!UBERON:0002423;1.99e-14;25!UBERON:0001897;7.34e-13;2!UBERON:0010225;7.34e-13;2!UBERON:0005629;1.37e-12;2!UBERON:0005358;1.37e-12;2!UBERON:0001886;1.37e-12;2!UBERON:0004086;1.37e-12;2!UBERON:0005282;1.37e-12;2!UBERON:0005281;1.37e-12;2!UBERON:0002365;2.79e-11;31!UBERON:0002330;2.79e-11;31!UBERON:0002368;1.02e-09;33!UBERON:0002190;5.97e-09;3!UBERON:0009663;3.65e-08;7!UBERON:0005172;5.01e-08;52!UBERON:0005173;5.01e-08;52!UBERON:0002038;1.63e-07;1!UBERON:0009661;1.63e-07;1!UBERON:0002950;1.63e-07;1!UBERON:0001891;1.63e-07;1!UBERON:0000949;1.95e-07;43!UBERON:0002784;7.53e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.40e-19,19;UBERON:0006925,2.40e-19,19;UBERON:0008836,2.40e-19,19;UBERON:0008835,1.52e-16,22;UBERON:0003894,1.52e-16,22;UBERON:0009854,8.98e-16,23;UBERON:0007499,2.05e-14,25;UBERON:0009497,2.05e-14,25;UBERON:0000015,2.05e-14,25;UBERON:0002423,2.05e-14,25;UBERON:0006235,2.05e-14,25;UBERON:0004161,2.05e-14,25;UBERON:0009856,8.17e-14,26;UBERON:0001897,8.03e-13,2;UBERON:0010225,8.03e-13,2;UBERON:0005629,1.08e-12,2;UBERON:0005358,1.08e-12,2;UBERON:0001886,1.08e-12,2;UBERON:0004086,1.08e-12,2;UBERON:0005282,1.08e-12,2;UBERON:0005281,1.08e-12,2;UBERON:0002365,2.17e-11,31;UBERON:0002330,2.17e-11,31;UBERON:0002417,3.93e-10,60;UBERON:0000916,3.93e-10,60;UBERON:0002368,5.96e-10,35;UBERON:0005172,1.69e-09,54;UBERON:0005173,1.69e-09,54;UBERON:0002190,5.40e-09,3;UBERON:0009663,3.65e-08,7;UBERON:0002038,1.63e-07,1;UBERON:0009661,1.63e-07,1;UBERON:0002950,1.63e-07,1;UBERON:0001891,1.63e-07,1;UBERON:0009616,1.63e-07,1;UBERON:0010286,1.63e-07,1;UBERON:0000949,1.79e-07,45;UBERON:0002784,7.87e-07,4 | |||
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|short_description=p4@PC | |||
}} | }} |
Latest revision as of 16:13, 19 September 2015
Short description: | p4@PC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PC_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_NM_022172, uc001ojn.1_5end |
EntrezGene: | PC |
HGNC: | 8636 |
UniProt: | P11498 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.58e-24 | 15 |
fibroblast of choroid plexus | 1.08e-12 | 2 |
hepatocyte | 1.36e-12 | 12 |
central nervous system pericyte | 3.12e-12 | 2 |
subcutaneous fat cell | 5.40e-09 | 3 |