FFCP PHASE1:Hg19::chr12:116356689..116356694,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:116356689..116356694,- | |||
|coexpression_cluster_id=C154 | |||
|description=CAGE_peak_at_chr12:116356689..116356694,- | |||
|id=chr12:116356689..116356694,- | |||
|ontology_enrichment_celltype=CL:0000945!3.44e-07!24;CL:0000826!3.44e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000785;2.30e-21;1!CL:0000819;2.30e-21;1!CL:0000182;2.22e-15;12!CL:0000945;3.67e-08;24!CL:0000322;5.73e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.30e-21,1;CL:0000182,2.12e-15,12;CL:0000785,2.23e-11,2;CL:0000955,2.23e-11,2;CL:0000818,2.23e-11,2;CL:0000954,2.23e-11,2;CL:0000816,2.23e-11,2;CL:0000945,3.63e-08,24;CL:0000826,3.63e-08,24;CL:0000817,5.18e-08,3;CL:0000322,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.03e-16;11!UBERON:0009497;2.99e-14;13!CL:0000954;2.23e-11;2!UBERON:0001041;6.86e-11;30 | |||
|ontology_enrichment_disease=DOID:162!1.37e-30!235;DOID:14566!1.32e-29!239;DOID:0060058!7.64e-20!10;DOID:2531!1.38e-19!51;DOID:0060083!1.38e-19!51;DOID:0050687!2.83e-16!143;DOID:0050686!2.30e-12!137;DOID:1749!1.68e-09!14;DOID:1240!7.95e-09!39;DOID:305!1.16e-08!106;DOID:8692!4.75e-07!31;DOID:170!7.64e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.30e-21;1!DOID:8675;2.30e-21;1!DOID:0060058;1.10e-18;10!DOID:3910;2.60e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.30e-21,1;DOID:8675,2.30e-21,1;DOID:0060058,1.07e-18,10;DOID:3910,2.73e-11,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.60e-11;2!UBERON:0002173;2.60e-11;2!UBERON:0002186;2.60e-11;2!UBERON:0002107;5.87e-10;19!UBERON:0006925;5.87e-10;19!UBERON:0004821;5.73e-08;3!UBERON:0007499;5.73e-08;3!UBERON:0003215;5.73e-08;3!UBERON:0010368;5.73e-08;3!UBERON:0009911;5.73e-08;3!UBERON:0002299;5.73e-08;3!UBERON:0006524;5.73e-08;3!UBERON:0008874;5.73e-08;3!UBERON:0002169;5.73e-08;3!UBERON:0004894;5.73e-08;3!UBERON:0002423;1.04e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007499,5.34e-13,25;UBERON:0009856,1.63e-12,26;UBERON:0004903,2.73e-11,2;UBERON:0002173,2.73e-11,2;UBERON:0002186,2.73e-11,2;UBERON:0002107,5.69e-10,19;UBERON:0006925,5.69e-10,19;UBERON:0008836,5.69e-10,19;UBERON:0008835,1.08e-08,22;UBERON:0003894,1.08e-08,22;UBERON:0009854,2.42e-08,23;UBERON:0004821,5.93e-08,3;UBERON:0003215,5.93e-08,3;UBERON:0010368,5.93e-08,3;UBERON:0009911,5.93e-08,3;UBERON:0002299,5.93e-08,3;UBERON:0006524,5.93e-08,3;UBERON:0008874,5.93e-08,3;UBERON:0002169,5.93e-08,3;UBERON:0004894,5.93e-08,3;UBERON:0009497,1.01e-07,25;UBERON:0000015,1.01e-07,25;UBERON:0002423,1.01e-07,25;UBERON:0006235,1.01e-07,25;UBERON:0004161,1.01e-07,25 | |||
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| ||
|short_description=p@chr12:116356689..116356694,- | |||
}} | }} |
Latest revision as of 05:21, 24 July 2015
Short description: | p@chr12:116356689..116356694, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:116356689..116356694, - |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.30e-21 | 1 |
hepatocyte | 2.12e-15 | 12 |
mature B cell | 2.23e-11 | 2 |
pre-B-II cell | 2.23e-11 | 2 |
transitional stage B cell | 2.23e-11 | 2 |
small pre-B-II cell | 2.23e-11 | 2 |
immature B cell | 2.23e-11 | 2 |
lymphocyte of B lineage | 3.63e-08 | 24 |
pro-B cell | 3.63e-08 | 24 |
precursor B cell | 5.18e-08 | 3 |
pneumocyte | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial sac | 5.34e-13 | 25 |
sac | 1.63e-12 | 26 |
bronchoalveolar duct junction | 2.73e-11 | 2 |
alveolar duct | 2.73e-11 | 2 |
bronchiole | 2.73e-11 | 2 |
liver | 5.69e-10 | 19 |
digestive gland | 5.69e-10 | 19 |
liver bud | 5.69e-10 | 19 |
hepatic diverticulum | 1.08e-08 | 22 |
liver primordium | 1.08e-08 | 22 |
digestive tract diverticulum | 2.42e-08 | 23 |
pulmonary alveolus epithelium | 5.93e-08 | 3 |
alveolus | 5.93e-08 | 3 |
pulmonary lobule | 5.93e-08 | 3 |
lobule | 5.93e-08 | 3 |
alveolus of lung | 5.93e-08 | 3 |
alveolar system | 5.93e-08 | 3 |
pulmonary acinus | 5.93e-08 | 3 |
alveolar sac | 5.93e-08 | 3 |
alveolar wall | 5.93e-08 | 3 |
epithelium of foregut-midgut junction | 1.01e-07 | 25 |
anatomical boundary | 1.01e-07 | 25 |
hepatobiliary system | 1.01e-07 | 25 |
foregut-midgut junction | 1.01e-07 | 25 |
septum transversum | 1.01e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.30e-21 | 1 |
lymphosarcoma | 2.30e-21 | 1 |
lymphoma | 1.07e-18 | 10 |
lung adenocarcinoma | 2.73e-11 | 2 |