FFCP PHASE1:Hg19::chr12:117496367..117496370,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:117496367..117496370,- to FFCP PHASE1:Hg19::chr12:117496367..117496370,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:117496367..117496370,- | |||
|description=CAGE_peak_at_chr12:117496367..117496370,- | |||
|id=chr12:117496367..117496370,- | |||
|ontology_enrichment_celltype=CL:0000037!3.33e-15!172;CL:0000566!3.33e-15!172;CL:0000988!2.81e-14!182;CL:0002032!3.07e-14!165;CL:0000837!3.07e-14!165;CL:0000763!1.82e-08!112;CL:0000049!1.82e-08!112;CL:0002031!4.56e-07!124;CL:0002393!7.69e-07!9;CL:0002397!7.69e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.08e-13;5!CL:0000764;6.94e-10;2!CL:0000558;6.94e-10;2!CL:0000163;1.80e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.60e-13,5;CL:0002028,1.60e-13,5;CL:0000763,3.20e-10,108;CL:0000049,3.20e-10,108;CL:0000037,5.89e-10,168;CL:0000764,6.56e-10,2;CL:0000765,6.56e-10,2;CL:0000050,6.56e-10,2;CL:0000038,6.56e-10,2;CL:0000558,6.56e-10,2;CL:0000547,6.56e-10,2;CL:0000549,6.56e-10,2;CL:0000550,6.56e-10,2;CL:0000552,6.56e-10,2;CL:0002032,1.19e-09,161;CL:0000837,1.19e-09,161;CL:0000988,3.72e-09,177;CL:0000163,1.56e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.34e-15!51;DOID:0060083!1.34e-15!51;DOID:1240!1.44e-14!39;DOID:8692!2.23e-13!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.41e-19;31!DOID:1240;7.11e-14;39!DOID:2531;1.38e-11;51!DOID:0060083;1.38e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.41e-19,31;DOID:1240,4.98e-17,39;DOID:2531,2.77e-14,51;DOID:0060083,2.77e-14,51;DOID:0050686,5.96e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.14e-20!115;UBERON:0001049!1.44e-08!57;UBERON:0005068!1.44e-08!57;UBERON:0006241!1.44e-08!57;UBERON:0007135!1.44e-08!57;UBERON:0002780!1.90e-08!41;UBERON:0001890!1.90e-08!41;UBERON:0006240!1.90e-08!41;UBERON:0001893!3.20e-08!34;UBERON:0002020!3.62e-08!34;UBERON:0003528!3.62e-08!34;UBERON:0001869!4.32e-08!32;UBERON:0003080!4.39e-08!42;UBERON:0002791!1.04e-07!33;UBERON:0001017!1.81e-07!82;UBERON:0002616!3.41e-07!59;UBERON:0000073!3.68e-07!94;UBERON:0001016!3.68e-07!94;UBERON:0005743!4.27e-07!86;UBERON:0000955!9.21e-07!69;UBERON:0006238!9.21e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:117496367..117496370,- | |||
}} | }} |
Latest revision as of 05:27, 24 July 2015
Short description: | p@chr12:117496367..117496370, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:117496367..117496370, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.60e-13 | 5 |
basophil mast progenitor cell | 1.60e-13 | 5 |
myeloid cell | 3.20e-10 | 108 |
common myeloid progenitor | 3.20e-10 | 108 |
hematopoietic stem cell | 5.89e-10 | 168 |
erythroid lineage cell | 6.56e-10 | 2 |
erythroblast | 6.56e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 6.56e-10 | 2 |
erythroid progenitor cell | 6.56e-10 | 2 |
reticulocyte | 6.56e-10 | 2 |
proerythroblast | 6.56e-10 | 2 |
basophilic erythroblast | 6.56e-10 | 2 |
polychromatophilic erythroblast | 6.56e-10 | 2 |
orthochromatic erythroblast | 6.56e-10 | 2 |
hematopoietic oligopotent progenitor cell | 1.19e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-09 | 161 |
hematopoietic cell | 3.72e-09 | 177 |
endocrine cell | 1.56e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.41e-19 | 31 |
leukemia | 4.98e-17 | 39 |
hematologic cancer | 2.77e-14 | 51 |
immune system cancer | 2.77e-14 | 51 |
organ system cancer | 5.96e-07 | 137 |