FFCP PHASE1:Hg19::chr12:75723814..75723850,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84698 | |EntrezGene=84698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16471 | |HGNC=16471 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXY5 | |UniProt=Q9BXY5 | ||
|association_with_transcript=0bp_to_ENST00000409445,ENST00000493070,NM_032606,uc001sxk.3_5end | |||
|cluster_id=chr12:75723814..75723850,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_4_at_CAPS2_5end | |||
|id=chr12:75723814..75723850,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.59e-12;2!UBERON:0009117;7.40e-10;10!UBERON:0005564;7.40e-10;10!UBERON:0008947;1.67e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.76e-32!57;UBERON:0005068!3.76e-32!57;UBERON:0006241!3.76e-32!57;UBERON:0007135!3.76e-32!57;UBERON:0002616!6.40e-31!59;UBERON:0007023!9.57e-30!115;UBERON:0000955!2.18e-25!69;UBERON:0006238!2.18e-25!69;UBERON:0001017!5.45e-23!82;UBERON:0002780!1.69e-22!41;UBERON:0001890!1.69e-22!41;UBERON:0006240!1.69e-22!41;UBERON:0003075!5.03e-22!86;UBERON:0007284!5.03e-22!86;UBERON:0002298!5.35e-22!8;UBERON:0003080!6.73e-22!42;UBERON:0005743!1.02e-21!86;UBERON:0002346!7.74e-21!90;UBERON:0000073!3.05e-19!94;UBERON:0001016!3.05e-19!94;UBERON:0002020!1.37e-17!34;UBERON:0003528!1.37e-17!34;UBERON:0001893!2.84e-17!34;UBERON:0001896!1.10e-15!3;UBERON:0005290!1.10e-15!3;UBERON:0010096!1.10e-15!3;UBERON:0000988!1.34e-15!3;UBERON:0001869!1.65e-15!32;UBERON:0002791!5.53e-15!33;UBERON:0004733!1.78e-14!12;UBERON:0002028!1.78e-14!12;UBERON:0007277!1.78e-14!12;UBERON:0003056!3.41e-14!61;UBERON:0002308!9.84e-14!9;UBERON:0000125!9.84e-14!9;UBERON:0004732!2.57e-13!13;UBERON:0000153!5.60e-13!129;UBERON:0007811!5.60e-13!129;UBERON:0000200!5.66e-13!6;UBERON:0000033!2.20e-12!123;UBERON:0000369!9.56e-12!4;UBERON:0002435!9.56e-12!4;UBERON:0000204!9.56e-12!4;UBERON:0010082!9.56e-12!4;UBERON:0003076!1.84e-11!15;UBERON:0003057!1.84e-11!15;UBERON:0003127!2.34e-11!2;UBERON:0001873!2.59e-11!2;UBERON:0010122!2.59e-11!2;UBERON:0002148!3.70e-11!2;UBERON:0009662!3.70e-11!2;UBERON:0002619!2.28e-09!22;UBERON:0000025!4.10e-09!194;UBERON:0004121!9.67e-09!169;UBERON:0000924!1.95e-08!173;UBERON:0006601!1.95e-08!173;UBERON:0000956!3.48e-08!25;UBERON:0000203!3.48e-08!25;UBERON:0005383!8.17e-08!3;UBERON:0005382!8.17e-08!3;UBERON:0001950!9.87e-08!20;UBERON:0006331!1.03e-07!3;UBERON:0002771!1.93e-07!3;UBERON:0001894!6.73e-07!7;UBERON:0009663!6.73e-07!7;UBERON:0006222!6.73e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;4.17e-30;3!UBERON:0005290;4.17e-30;3!UBERON:0002171;3.28e-23;1!UBERON:0006518;3.28e-23;1!UBERON:0008949;3.28e-23;1!UBERON:0000101;3.28e-23;1!UBERON:0002167;3.28e-23;1!UBERON:0002298;1.31e-15;6!UBERON:0003127;2.59e-12;2!UBERON:0001873;2.59e-12;2!UBERON:0000473;4.42e-12;8!UBERON:0003135;4.80e-09;11!UBERON:0005383;1.21e-08;3!UBERON:0005382;1.21e-08;3!UBERON:0004733;2.75e-08;12!UBERON:0002028;2.75e-08;12!UBERON:0004732;1.02e-07;13!UBERON:0000369;8.61e-07;4!UBERON:0002435;8.61e-07;4!UBERON:0000204;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,5.61e-30,3;UBERON:0005290,5.61e-30,3;UBERON:0010096,5.61e-30,3;UBERON:0002171,4.10e-23,1;UBERON:0006518,4.10e-23,1;UBERON:0008949,4.10e-23,1;UBERON:0000101,4.10e-23,1;UBERON:0002167,4.10e-23,1;UBERON:0002298,1.52e-15,6;UBERON:0001873,1.85e-12,2;UBERON:0010122,1.85e-12,2;UBERON:0003127,3.24e-12,2;UBERON:0000473,3.95e-12,8;UBERON:0007023,2.48e-09,114;UBERON:0003135,4.43e-09,11;UBERON:0005383,9.66e-09,3;UBERON:0005382,9.66e-09,3;UBERON:0004733,2.96e-08,12;UBERON:0002028,2.96e-08,12;UBERON:0007277,2.96e-08,12;UBERON:0004732,1.09e-07,13;UBERON:0000369,7.27e-07,4;UBERON:0002435,7.27e-07,4;UBERON:0000204,7.27e-07,4;UBERON:0010082,7.27e-07,4;UBERON:0003076,8.83e-07,15;UBERON:0003057,8.83e-07,15 | |||
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|short_description=p4@CAPS2 | |||
}} | }} |
Latest revision as of 19:38, 24 September 2015
Short description: | p4@CAPS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CAPS2_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000409445, ENST00000493070, NM_032606, uc001sxk.3_5end |
EntrezGene: | CAPS2 |
HGNC: | 16471 |
UniProt: | Q9BXY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 5.61e-30 | 3 |
myelencephalon | 5.61e-30 | 3 |
future myelencephalon | 5.61e-30 | 3 |
lower lobe of right lung | 4.10e-23 | 1 |
right lung lobe | 4.10e-23 | 1 |
lower lobe of lung | 4.10e-23 | 1 |
lobe of lung | 4.10e-23 | 1 |
right lung | 4.10e-23 | 1 |
brainstem | 1.52e-15 | 6 |
caudate nucleus | 1.85e-12 | 2 |
future caudate nucleus | 1.85e-12 | 2 |
open tracheal system trachea | 3.24e-12 | 2 |
testis | 3.95e-12 | 8 |
adult organism | 2.48e-09 | 114 |
male reproductive organ | 4.43e-09 | 11 |
caudate-putamen | 9.66e-09 | 3 |
dorsal striatum | 9.66e-09 | 3 |
segmental subdivision of hindbrain | 2.96e-08 | 12 |
hindbrain | 2.96e-08 | 12 |
presumptive hindbrain | 2.96e-08 | 12 |
segmental subdivision of nervous system | 1.09e-07 | 13 |
corpus striatum | 7.27e-07 | 4 |
striatum | 7.27e-07 | 4 |
ventral part of telencephalon | 7.27e-07 | 4 |
future corpus striatum | 7.27e-07 | 4 |
posterior neural tube | 8.83e-07 | 15 |
chordal neural plate | 8.83e-07 | 15 |