FFCP PHASE1:Hg19::chr14:101014442..101014468,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:101014442..101014468,- to FFCP PHASE1:Hg19::chr14:101014442..101014468,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57596 | |EntrezGene=57596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24163 | |HGNC=24163 | ||
|TSSclassifier=strong | |||
|UniProt=G3V600 | |UniProt=G3V600 | ||
|association_with_transcript=-7bp_to_ENST00000554356_5end | |||
|cluster_id=chr14:101014442..101014468,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_2_at_BEGAIN_5end | |||
|id=chr14:101014442..101014468,- | |||
|ontology_enrichment_celltype=CL:0000037!3.81e-39!172;CL:0000566!3.81e-39!172;CL:0002032!2.09e-37!165;CL:0000837!2.09e-37!165;CL:0000988!3.53e-37!182;CL:0000763!4.56e-36!112;CL:0000049!4.56e-36!112;CL:0000738!7.78e-27!140;CL:0000766!2.89e-25!76;CL:0002031!2.34e-23!124;CL:0000839!6.08e-23!70;CL:0002087!1.42e-22!119;CL:0000860!4.42e-22!45;CL:0000557!2.46e-21!71;CL:0002194!8.73e-20!63;CL:0000576!8.73e-20!63;CL:0000040!8.73e-20!63;CL:0000559!8.73e-20!63;CL:0002057!2.00e-19!42;CL:0002009!9.75e-19!65;CL:0000134!6.77e-07!358;CL:0000236!7.10e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.50e-13;5!CL:0000763;1.95e-11;100!CL:0000236;1.56e-09;13!CL:0000163;2.17e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.18e-23,108;CL:0000049,1.18e-23,108;CL:0000037,3.59e-23,168;CL:0002032,5.96e-23,161;CL:0000837,5.96e-23,161;CL:0000988,1.53e-21,177;CL:0000097,2.31e-13,5;CL:0002028,2.31e-13,5;CL:0000738,6.07e-11,136;CL:0000766,7.03e-11,72;CL:0000236,4.95e-09,14;CL:0002031,1.59e-08,120;CL:0000839,6.97e-08,66;CL:0000557,1.01e-07,67;CL:0000163,2.07e-07,9;CL:0000134,4.89e-07,354;CL:0002320,9.78e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000049;6.63e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!1.43e-16!31;DOID:1240!1.12e-13!39;DOID:2531!4.64e-11!51;DOID:0060083!4.64e-11!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.27e-26;31!DOID:1240;5.85e-16;39!DOID:2531;1.96e-10;51!DOID:0060083;1.96e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.69e-27,31;DOID:1240,4.83e-21,39;DOID:2531,2.88e-17,51;DOID:0060083,2.88e-17,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.17e-23!102;UBERON:0003061!3.17e-23!102;UBERON:0002193!3.16e-22!112;UBERON:0002371!4.29e-18!80;UBERON:0001474!9.49e-16!86;UBERON:0002405!2.29e-14!115;UBERON:0004765!3.07e-11!101;UBERON:0001434!3.07e-11!101;UBERON:0001737!1.09e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.91e-09;2!UBERON:0005058;5.91e-09;2!UBERON:0009113;5.91e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.39e-07,98;UBERON:0003061,5.39e-07,98 | |||
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| ||
|short_description=p2@BEGAIN | |||
}} | }} |
Latest revision as of 10:38, 18 September 2015
Short description: | p2@BEGAIN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BEGAIN_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -7bp_to_ENST00000554356_5end |
EntrezGene: | BEGAIN |
HGNC: | 24163 |
UniProt: | G3V600 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.18e-23 | 108 |
common myeloid progenitor | 1.18e-23 | 108 |
hematopoietic stem cell | 3.59e-23 | 168 |
hematopoietic oligopotent progenitor cell | 5.96e-23 | 161 |
hematopoietic multipotent progenitor cell | 5.96e-23 | 161 |
hematopoietic cell | 1.53e-21 | 177 |
mast cell | 2.31e-13 | 5 |
basophil mast progenitor cell | 2.31e-13 | 5 |
leukocyte | 6.07e-11 | 136 |
myeloid leukocyte | 7.03e-11 | 72 |
B cell | 4.95e-09 | 14 |
hematopoietic lineage restricted progenitor cell | 1.59e-08 | 120 |
myeloid lineage restricted progenitor cell | 6.97e-08 | 66 |
granulocyte monocyte progenitor cell | 1.01e-07 | 67 |
endocrine cell | 2.07e-07 | 9 |
mesenchymal cell | 4.89e-07 | 354 |
connective tissue cell | 9.78e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.39e-07 | 98 |
blood island | 5.39e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.69e-27 | 31 |
leukemia | 4.83e-21 | 39 |
hematologic cancer | 2.88e-17 | 51 |
immune system cancer | 2.88e-17 | 51 |