FFCP PHASE1:Hg19::chr14:74296806..74296828,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:74296806..74296828,- to FFCP PHASE1:Hg19::chr14:74296806..74296828,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000555539,uc001xov.1_5end | |||
|cluster_id=chr14:74296806..74296828,- | |||
|coexpression_cluster_id=C182 | |||
|description=CAGE_peak_1_at_ENST00000555539_5end,CAGE_peak_1_at_uc001xov.1_5end | |||
|id=chr14:74296806..74296828,- | |||
|ontology_enrichment_celltype=CL:0000860!3.24e-29!45;CL:0002057!1.84e-24!42;CL:0002194!2.97e-18!63;CL:0000576!2.97e-18!63;CL:0000040!2.97e-18!63;CL:0000559!2.97e-18!63;CL:0002009!1.79e-17!65;CL:0000839!3.25e-17!70;CL:0000557!7.22e-17!71;CL:0000766!2.81e-15!76;CL:0002087!1.77e-10!119;CL:0002031!8.51e-10!124;CL:0000738!1.63e-08!140;CL:0000763!3.82e-08!112;CL:0000049!3.82e-08!112;CL:0000239!1.72e-07!3;CL:1000615!1.72e-07!3;CL:0002306!1.72e-07!3;CL:0002150!1.85e-07!3;CL:0000861!1.85e-07!3;CL:1000497!4.04e-07!18;CL:0002518!4.04e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.28e-29;33!CL:0002057;1.28e-29;33!CL:0000473;1.11e-21;39!CL:0000234;1.11e-21;39!CL:0000159;4.14e-17;2!CL:0000576;1.28e-14;48!CL:0000313;1.03e-09;1!CL:0000319;3.98e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.79e-25,42;CL:0002057,4.79e-25,42;CL:0000473,1.16e-21,48;CL:0000234,1.16e-21,48;CL:0000159,3.12e-17,2;CL:0002194,6.34e-17,59;CL:0000576,6.34e-17,59;CL:0000040,6.34e-17,59;CL:0000559,6.34e-17,59;CL:0002009,2.59e-16,61;CL:0000839,6.08e-15,66;CL:0000557,1.08e-14,67;CL:0000766,1.52e-13,72;CL:0000313,1.03e-09,1;CL:0002087,2.83e-09,115;CL:0000319,3.00e-09,1;CL:0002031,8.49e-09,120;CL:0000763,2.14e-08,108;CL:0000049,2.14e-08,108;CL:0000738,1.66e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.07e-17;42!UBERON:0003918;4.57e-08;10!UBERON:0007687;4.57e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;2.07e-17;2!DOID:2152;1.03e-09;1!DOID:3030;3.98e-09;1!DOID:299;5.14e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.76e-17,2;DOID:2152,1.03e-09,1;DOID:3030,3.00e-09,1;DOID:299,4.73e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0002371!8.46e-17!80;UBERON:0001474!4.44e-15!86;UBERON:0004765!6.40e-15!101;UBERON:0001434!6.40e-15!101;UBERON:0002390!1.54e-14!102;UBERON:0003061!1.54e-14!102;UBERON:0002193!1.72e-12!112;UBERON:0002405!3.36e-10!115;UBERON:0006853!1.72e-07!3;UBERON:0007685!1.72e-07!3;UBERON:0004134!1.72e-07!3;UBERON:0000062!8.69e-07!511;UBERON:0002113!9.95e-07!27;UBERON:0003918!9.95e-07!27;UBERON:0005095!9.95e-07!27;UBERON:0007687!9.95e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.03e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.79e-13,76;UBERON:0001474,1.15e-11,82;UBERON:0004765,1.84e-10,90;UBERON:0002405,4.62e-10,93;UBERON:0004911,1.03e-09,1;UBERON:0002390,1.89e-09,98;UBERON:0003061,1.89e-09,98;UBERON:0001434,3.19e-09,100;UBERON:0002193,2.14e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0.232429036905685,0.411167888021826,0.309706370895104,2.3015391385772,1.7931249457037,2.12834006899727,0.689491361473237,1.29096936716765,0,0.188242339542605,0.545812300115692,0,1.22433556948361,0.320929027076094,1.27867425159808,2.30895910130701,1.59570926097305,1.27867425159808,0,0,0.622822248995575,3.26623264833766,4.69334626578181,3.69221035998698,0,0,0.632924774881769,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11486539543521,3.95529298144223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74297483886435,10.9365981466629,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,1.99396161812156,0.661983911750998,0.313932918407225,0,5.12297182853627,0,0.173559738335131,0,0,0,0,0.290268993867255,0.511625219603299,0.246346371159628,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70386824306231,0,0,1.07572403599707,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0.655745261419609,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0,0,0,0,0,1.96618327002975,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0,0,24.1838902164856,13.8547989487245,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,8.16544652123884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0.232429036905685,0.411167888021826,0.309706370895104,2.3015391385772,1.7931249457037,2.12834006899727,0.689491361473237,1.29096936716765,0,0.188242339542605,0.545812300115692,0,1.22433556948361,0.320929027076094,1.27867425159808,2.30895910130701,1.59570926097305,1.27867425159808,0,0,0.622822248995575,3.26623264833766,4.69334626578181,3.69221035998698,0,0,0.632924774881769,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11486539543521,3.95529298144223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74297483886435,10.9365981466629,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,1.99396161812156,0.661983911750998,0.313932918407225,0,5.12297182853627,0,0.173559738335131,0,0,0,0,0.290268993867255,0.511625219603299,0.246346371159628,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70386824306231,0,0,1.07572403599707,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0.655745261419609,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0,0,0,0,0,1.96618327002975,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0,0,24.1838902164856,13.8547989487245,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,8.16544652123884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000555539,p1@uc001xov.1 | |||
}} | }} |
Latest revision as of 22:37, 24 July 2015
Short description: | p1@ENST00000555539, p1@uc001xov.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000555539_5end, CAGE_peak_1_at_uc001xov.1_5end |
Coexpression cluster: | C182_renal_mature_mesothelioma_lung_Mammary_Adipocyte_acute |
Association with transcript: | 9bp_to_ENST00000555539, uc001xov.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.79e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.79e-25 | 42 |
defensive cell | 1.16e-21 | 48 |
phagocyte | 1.16e-21 | 48 |
seromucus secreting cell | 3.12e-17 | 2 |
monopoietic cell | 6.34e-17 | 59 |
monocyte | 6.34e-17 | 59 |
monoblast | 6.34e-17 | 59 |
promonocyte | 6.34e-17 | 59 |
macrophage dendritic cell progenitor | 2.59e-16 | 61 |
myeloid lineage restricted progenitor cell | 6.08e-15 | 66 |
granulocyte monocyte progenitor cell | 1.08e-14 | 67 |
myeloid leukocyte | 1.52e-13 | 72 |
serous secreting cell | 1.03e-09 | 1 |
nongranular leukocyte | 2.83e-09 | 115 |
mucus secreting cell | 3.00e-09 | 1 |
hematopoietic lineage restricted progenitor cell | 8.49e-09 | 120 |
myeloid cell | 2.14e-08 | 108 |
common myeloid progenitor | 2.14e-08 | 108 |
leukocyte | 1.66e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.79e-13 | 76 |
bone element | 1.15e-11 | 82 |
skeletal element | 1.84e-10 | 90 |
immune system | 4.62e-10 | 93 |
epithelium of female gonad | 1.03e-09 | 1 |
hematopoietic system | 1.89e-09 | 98 |
blood island | 1.89e-09 | 98 |
skeletal system | 3.19e-09 | 100 |
hemolymphoid system | 2.14e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.76e-17 | 2 |
ovary epithelial cancer | 1.03e-09 | 1 |
mucinous adenocarcinoma | 3.00e-09 | 1 |
adenocarcinoma | 4.73e-08 | 25 |