FFCP PHASE1:Hg19::chr15:39885742..39885808,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:39885742..39885808,+ to FFCP PHASE1:Hg19::chr15:39885742..39885808,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7057 | |EntrezGene=7057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |HGNC=11785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-460bp_to_ENST00000559746_5end | |||
|cluster_id=chr15:39885742..39885808,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_18_at_THBS1_5end | |||
|id=chr15:39885742..39885808,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.35e-16!180;CL:0002371!1.77e-14!591;CL:0000222!4.03e-14!119;CL:0000057!6.15e-14!75;CL:0002139!6.56e-12!24;CL:0000115!1.97e-11!35;CL:0000144!3.77e-11!625;CL:0000220!7.31e-11!246;CL:0002078!1.47e-10!44;CL:0002321!2.06e-10!248;CL:0000548!2.53e-10!679;CL:0000004!2.53e-10!679;CL:0000255!2.53e-10!679;CL:0000012!8.85e-10!682;CL:0000071!1.56e-08!18;CL:0002546!1.56e-08!18;CL:0000680!3.24e-07!57;CL:0000056!3.24e-07!57;CL:0000355!3.24e-07!57;CL:0000192!4.40e-07!42;CL:0000514!4.40e-07!42;CL:0000213!5.75e-07!57;CL:0000215!5.75e-07!57;CL:0000359!6.23e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.57e-17;24!CL:0000115;2.88e-13;36!CL:0000071;3.58e-12;18!CL:0002620;9.48e-09;23!CL:1000413;3.34e-08;9!CL:0002078;4.72e-08;45!CL:0002334;4.24e-07;12!CL:0000359;4.46e-07;32!CL:0000057;8.68e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.26e-17,24;CL:0000057,1.48e-16,76;CL:0000115,1.40e-15,36;CL:0000071,3.75e-12,18;CL:0002546,3.75e-12,18;CL:0000222,4.72e-12,121;CL:0002078,1.43e-11,45;CL:0002620,9.24e-09,23;CL:0000213,3.26e-08,58;CL:0000215,3.26e-08,58;CL:1000413,3.26e-08,9;CL:0002321,3.35e-08,250;CL:0000723,4.27e-08,433;CL:0000048,1.02e-07,427;CL:0000359,1.57e-07,32;CL:0000034,2.40e-07,441;CL:0002334,4.49e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;3.58e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.15e-18!79;UBERON:0007798!5.15e-18!79;UBERON:0000055!7.39e-18!69;UBERON:0001981!1.02e-16!60;UBERON:0007500!1.02e-16!60;UBERON:0004537!1.02e-16!60;UBERON:0006965!1.02e-16!60;UBERON:0004872!1.79e-16!84;UBERON:0001009!2.32e-13!113;UBERON:0004535!3.93e-13!110;UBERON:0000468!4.88e-13!659;UBERON:0003914!5.68e-13!118;UBERON:0001637!2.53e-12!42;UBERON:0003509!2.53e-12!42;UBERON:0004572!2.53e-12!42;UBERON:0000467!5.72e-12!625;UBERON:0000480!8.88e-12!626;UBERON:0000490!8.53e-11!138;UBERON:0003102!1.19e-10!95;UBERON:0002100!6.11e-10!216;UBERON:0000926!1.70e-09!448;UBERON:0004120!1.70e-09!448;UBERON:0006603!1.70e-09!448;UBERON:0005256!2.02e-09!143;UBERON:0000914!5.21e-09!83;UBERON:0002329!5.21e-09!83;UBERON:0003077!5.21e-09!83;UBERON:0003059!5.21e-09!83;UBERON:0007282!5.21e-09!83;UBERON:0009618!5.21e-09!83;UBERON:0007285!5.21e-09!83;UBERON:0000486!7.10e-09!82;UBERON:0004573!1.51e-08!33;UBERON:0004571!1.51e-08!33;UBERON:0001986!1.56e-08!18;UBERON:0004638!1.56e-08!18;UBERON:0004852!1.56e-08!18;UBERON:0000475!1.27e-07!365;UBERON:0004923!1.28e-07!57;UBERON:0000487!2.00e-07!22;UBERON:0004290!4.15e-07!70;UBERON:0006914!6.85e-07!25;UBERON:0002199!7.13e-07!45;UBERON:0002416!7.13e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.32e-13;42!UBERON:0003509;7.32e-13;42!UBERON:0004572;7.32e-13;42!UBERON:0007500;3.58e-12;56!UBERON:0001981;3.58e-12;56!UBERON:0004537;3.58e-12;56!UBERON:0004638;3.58e-12;18!UBERON:0001986;3.58e-12;18!UBERON:0004852;3.58e-12;18!UBERON:0000055;6.78e-12;65!UBERON:0004573;1.52e-10;33!UBERON:0004571;1.52e-10;33!UBERON:0000487;3.12e-10;22!UBERON:0000947;1.78e-08;21!UBERON:0010191;1.78e-08;21!UBERON:0006914;2.55e-08;25!UBERON:0003915;3.34e-08;9!UBERON:0004700;3.34e-08;9!UBERON:0001917;3.34e-08;9!UBERON:0005631;4.46e-08;10!UBERON:0000158;4.46e-08;10!UBERON:0002049;5.23e-08;75!UBERON:0007798;5.23e-08;75!UBERON:0002097;1.14e-07;41!UBERON:0003914;1.69e-07;74!UBERON:0002199;3.93e-07;46!UBERON:0002416;3.93e-07;46!UBERON:0003688;5.57e-07;6!UBERON:0002358;5.57e-07;6!UBERON:0003684;5.57e-07;6!UBERON:0001178;5.57e-07;6 | |||
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|phase1_expression=11.2640595147745,20.5536502935344,6.62485699251064,36.0263874071269,7.59833860526389,32.2765253917136,5.06599756336621,0,0.261185628199839,0.982935746006035,0,2.83973783769224,6.85794143393979,0.37129905888014,1.32558950291166,8.74022690387308,4.82155622419182,5.11217063271161,7.3189919818576,0.492484232307152,0.204000691244253,1.25381888591235,0,1.09499540058307,0.502170558379211,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,3.81034450193269,0,0.223915474239924,0,0,0.290796477559129,0,0,2.09186133215116,0.411167888021826,0.309706370895104,3.45230870786581,0.256160706529101,0,3.10271112662957,1.29096936716765,0,1.69418105588344,0.545812300115692,0.224723484445085,2.75475503133812,0,0.639337125799041,0.659702600373432,0,0,8.12585868160035,0,0,4.01997864410789,1.0429658368404,0.434377689410233,4.23779651843358,0.736555271975129,0,0.211255286311942,0.212604299965044,0,0.336985893439485,1.05123824989054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96373941714944,0.722878304769133,5.51471701699479,1.88300474649071,1.5905718941022,5.35298357332899,0.378139268656271,0.443458794925128,0.175669571386252,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,2.38514888840046,3.4409383804245,4.51282652089873,7.91431118693613,3.35599548967925,6.05259692268148,5.22487416342026,4.13466814670926,3.20189636418039,5.69025041699939,2.81980521976403,6.0821768457481,7.07779966889692,3.67663080345869,12.1521292182264,3.39338967479503,2.02076435363553,1.80178368773316,3.06633274931766,0,5.1296488300514,0,0,2.61656431285521,19.3819061161174,6.96467814155189,4.76673050927588,2.58152958673932,1.41867352879343,2.24271040056923,5.33744978648525,8.6333641946006,1.8672662123986,0.808264032418128,1.30769522490767,0.302714855289863,0.576175924479999,0,0,1.1409436430889,1.19558944441441,0,0,0.280901613404497,1.42907919878425,0.61417158655884,0.929932030581889,10.6920257155385,17.0614181202204,0,0,0.168336113954066,0,0.831192346452549,2.63386572528503,13.7919508109559,7.06118876861005,2.60894021268048,13.0954434052869,9.39652510801697,7.62954844174423,4.80145753735044,4.43125875725287,8.24449728146013,5.58350568994769,6.58227695740938,3.41029518064195,6.81571190459109,3.58994604704967,2.58633690910099,8.16522062788213,3.52632343796741,4.91725717700414,2.70565194428616,1.90922284413584,2.00763216772303,0,0,0,0,0,0,7.8224766164908,15.4377825166292,4.14404764057442,9.75172648867156,4.33127689001751,0.354920400119532,0.505754070234305,0.241011029883482,0.55146986366197,0.435758888184812,0.71181185733329,0.269662616320329,0.588664395376038,0,4.42893272774789,4.20725321410337,0,1.47008711385542,0,0.982827216677626,0,0,0,0.171567810298526,1.97550513735526,0,2.21163739305588,2.03694579348765,0.651616610620649,0,0,0.115930404975077,0.117408694235822,7.07395594029262,11.1116523018387,14.0788072653603,0,0,0,0,0,1.87467667973554,5.37542810236351,2.41017665312057,2.95543124919399,1.16253575405585,1.91691339582606,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.411309970813294,0,0,0,0,0.1466765716419,0.775630294546667,0,0.845302752556,3.98907174877306,5.2003718455683,0.514414748524284,0,0.532844358032199,1.28680194292333,0,0,0.325736184293735,1.77695974371273,0.791951872933429,0,0,0,0,0,0,3.35474797688216,0,0,2.75084482668401,1.43833425785268,2.50685348535854,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0.736148950314839,1.00034104211935,0.271265023699736,17.0536106455262,33.1877919162721,14.3509197680881,9.95702027438062,3.00946099727719,4.5481500811197,1.03473071292505,0.664225598535437,1.10621501125022,3.90976265106373,0,0,0.620304078368662,0.215714200818617,0.106727557803444,0.303127571446259,0,2.11673205330776,12.4053903909388,25.0143016459542,23.5754479323782,3.97231362692673,6.65219423786715,13.6725832972066,7.42090332224955,2.46735510084249,1.59805552781814,0.246381468041427,1.03850885836724,0.232420756919918,0,5.21316822788541,0.644566922551274,1.37777337797528,1.0925470080403,1.96686622439136,0,0,0,0,0.211103257785751,2.27466768141793,2.2112181685947,1.72732732881711,10.7959076883203,0.812839312631559,0.501689773854853,0.509752546090077,0.831076008928724,0.223874754722178,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0.412164046590889,0,0,0.574265537996172,3.25030123018261,3.21367859688319,0.193341436584244,0.308097234229289,0.15350367472613,0.413509717453592,0.322260734604821,0.725083469571143,0.511359764496605,0.890320356467374,2.47927373041467,3.84380134730212,4.08360679982669,0.4046311234222,0,7.55549632393536,0.6970372701606,0.308033580176089,1.06461206063404,0,1.29726953372744,0.286249773483982,0,1.2655176988749,0.38126038784765,0.255897791311334,0,1.59101623962968,1.56989728039846,2.15846949099978,1.09814811894422,0.471249609382746,0.202182481573316,0,2.10629228119491,0,1.21856744815642,6.33900880540533,1.36499911407986,1.69686518344455,1.13008116620243,1.1027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| ||
|short_description=p18@THBS1 | |||
}} | }} |
Latest revision as of 11:24, 17 September 2015
Short description: | p18@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | -460bp_to_ENST00000559746_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.26e-17 | 24 |
fibroblast | 1.48e-16 | 76 |
endothelial cell | 1.40e-15 | 36 |
blood vessel endothelial cell | 3.75e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.75e-12 | 18 |
mesodermal cell | 4.72e-12 | 121 |
meso-epithelial cell | 1.43e-11 | 45 |
skin fibroblast | 9.24e-09 | 23 |
lining cell | 3.26e-08 | 58 |
barrier cell | 3.26e-08 | 58 |
endothelial cell of artery | 3.26e-08 | 9 |
embryonic cell | 3.35e-08 | 250 |
somatic stem cell | 4.27e-08 | 433 |
multi fate stem cell | 1.02e-07 | 427 |
vascular associated smooth muscle cell | 1.57e-07 | 32 |
stem cell | 2.40e-07 | 441 |
preadipocyte | 4.49e-07 | 12 |