FFCP PHASE1:Hg19::chr15:41408648..41408789,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:41408648..41408789,- to FFCP PHASE1:Hg19::chr15:41408648..41408789,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54617 | |EntrezGene=54617 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26956 | |HGNC=26956 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULG1 | |UniProt=Q9ULG1 | ||
|association_with_transcript=-96bp_to_ENST00000361937_5end | |||
|cluster_id=chr15:41408648..41408789,- | |||
|description=CAGE_peak_2_at_INO80_5end | |||
|id=chr15:41408648..41408789,- | |||
|ontology_enrichment_celltype=CL:0000860!7.49e-21!45;CL:0002057!3.59e-19!42;CL:0000766!1.06e-17!76;CL:0000557!5.23e-15!71;CL:0002009!5.29e-14!65;CL:0000738!5.74e-14!140;CL:0000763!1.62e-13!112;CL:0000049!1.62e-13!112;CL:0002194!5.14e-13!63;CL:0000576!5.14e-13!63;CL:0000040!5.14e-13!63;CL:0000559!5.14e-13!63;CL:0000037!6.00e-13!172;CL:0000566!6.00e-13!172;CL:0000839!1.01e-12!70;CL:0000988!5.47e-11!182;CL:0002032!1.21e-10!165;CL:0000837!1.21e-10!165;CL:0002031!6.92e-10!124;CL:0002087!1.73e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.98e-17;33!CL:0002057;3.98e-17;33!CL:0000576;1.83e-11;48!CL:0000473;5.58e-11;39!CL:0000234;5.58e-11;39!CL:0000766;6.55e-09;69!CL:0000094;9.91e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.86e-19,42;CL:0002057,1.86e-19,42;CL:0000766,3.60e-17,72;CL:0000473,5.11e-15,48;CL:0000234,5.11e-15,48;CL:0000557,1.91e-14,67;CL:0002009,1.28e-13,61;CL:0000738,5.68e-13,136;CL:0000763,5.69e-13,108;CL:0000049,5.69e-13,108;CL:0002194,1.29e-12,59;CL:0000576,1.29e-12,59;CL:0000040,1.29e-12,59;CL:0000559,1.29e-12,59;CL:0000839,3.90e-12,66;CL:0000037,5.58e-12,168;CL:0000988,2.52e-10,177;CL:0002032,9.86e-10,161;CL:0000837,9.86e-10,161;CL:0002031,7.58e-09,120;CL:0002087,1.28e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.04e-14;42 | |||
|ontology_enrichment_disease=DOID:0050687!1.15e-08!143;DOID:305!4.74e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.52e-08,143;DOID:305,7.79e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.75e-12!80;UBERON:0001474!4.11e-12!86;UBERON:0002390!5.04e-10!102;UBERON:0003061!5.04e-10!102;UBERON:0002405!7.34e-10!115;UBERON:0002193!3.09e-09!112;UBERON:0004765!1.77e-07!101;UBERON:0001434!1.77e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.28e-12,76;UBERON:0001474,1.61e-11,82;UBERON:0002405,1.05e-09,93;UBERON:0002390,1.39e-09,98;UBERON:0003061,1.39e-09,98;UBERON:0002193,9.14e-09,108;UBERON:0004765,1.67e-08,90 | |||
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| ||
|short_description=p2@INO80 | |||
}} | }} |
Latest revision as of 14:17, 17 September 2015
Short description: | p2@INO80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_INO80_5end |
Coexpression cluster: | NA |
Association with transcript: | -96bp_to_ENST00000361937_5end |
EntrezGene: | INO80 |
HGNC: | 26956 |
UniProt: | Q9ULG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.86e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.86e-19 | 42 |
myeloid leukocyte | 3.60e-17 | 72 |
defensive cell | 5.11e-15 | 48 |
phagocyte | 5.11e-15 | 48 |
granulocyte monocyte progenitor cell | 1.91e-14 | 67 |
macrophage dendritic cell progenitor | 1.28e-13 | 61 |
leukocyte | 5.68e-13 | 136 |
myeloid cell | 5.69e-13 | 108 |
common myeloid progenitor | 5.69e-13 | 108 |
monopoietic cell | 1.29e-12 | 59 |
monocyte | 1.29e-12 | 59 |
monoblast | 1.29e-12 | 59 |
promonocyte | 1.29e-12 | 59 |
myeloid lineage restricted progenitor cell | 3.90e-12 | 66 |
hematopoietic stem cell | 5.58e-12 | 168 |
hematopoietic cell | 2.52e-10 | 177 |
hematopoietic oligopotent progenitor cell | 9.86e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.86e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 7.58e-09 | 120 |
nongranular leukocyte | 1.28e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.28e-12 | 76 |
bone element | 1.61e-11 | 82 |
immune system | 1.05e-09 | 93 |
hematopoietic system | 1.39e-09 | 98 |
blood island | 1.39e-09 | 98 |
hemolymphoid system | 9.14e-09 | 108 |
skeletal element | 1.67e-08 | 90 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.52e-08 | 143 |
carcinoma | 7.79e-08 | 106 |