FFCP PHASE1:Hg19::chr17:40351201..40351230,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:40351201..40351230,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr17:40351201..40351230,+ | |||
|id=chr17:40351201..40351230,+ | |||
|ontology_enrichment_celltype=CL:0002393!4.52e-37!9;CL:0002397!4.52e-37!9;CL:0000875!8.92e-29!3;CL:0002396!8.92e-29!3;CL:0000766!3.94e-15!76;CL:0000839!7.33e-14!70;CL:0000557!1.21e-13!71;CL:0000763!1.85e-13!112;CL:0000049!1.85e-13!112;CL:0002057!3.92e-13!42;CL:0000860!3.44e-12!45;CL:0000738!4.45e-12!140;CL:0002032!2.00e-11!165;CL:0000837!2.00e-11!165;CL:0000037!7.45e-11!172;CL:0000566!7.45e-11!172;CL:0002194!1.95e-10!63;CL:0000576!1.95e-10!63;CL:0000040!1.95e-10!63;CL:0000559!1.95e-10!63;CL:0002031!3.03e-10!124;CL:0000988!4.10e-10!182;CL:0002009!4.42e-10!65;CL:0002274!5.81e-08!5;CL:0000457!5.81e-08!5;CL:0002191!5.81e-08!5;CL:0000097!5.81e-08!5;CL:0000831!5.81e-08!5;CL:0002028!5.81e-08!5;CL:0002087!1.41e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000875;1.55e-98;3!CL:0002396;1.55e-98;3!CL:0002393;5.74e-23;6!CL:0002397;5.74e-23;6!CL:0000576;8.53e-11;48!CL:0000766;9.72e-10;69!CL:0002087;3.22e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,3.03e-98,3;CL:0002396,3.03e-98,3;CL:0002393,4.91e-91,9;CL:0002397,4.91e-91,9;CL:0000860,4.46e-20,42;CL:0002057,4.46e-20,42;CL:0000473,1.22e-17,48;CL:0000234,1.22e-17,48;CL:0002194,3.22e-14,59;CL:0000576,3.22e-14,59;CL:0000040,3.22e-14,59;CL:0000559,3.22e-14,59;CL:0002009,8.92e-14,61;CL:0000839,8.75e-13,66;CL:0000557,1.33e-12,67;CL:0000766,9.00e-12,72;CL:0002087,1.15e-10,115;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0000763,5.11e-08,108;CL:0000049,5.11e-08,108;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.31e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.64e-14!80;UBERON:0001474!3.48e-13!86;UBERON:0004765!5.86e-11!101;UBERON:0001434!5.86e-11!101;UBERON:0002390!7.83e-11!102;UBERON:0003061!7.83e-11!102;UBERON:0002193!1.06e-09!112;UBERON:0002405!2.13e-09!115;UBERON:0002204!4.79e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.49e-11,76;UBERON:0001474,2.09e-10,82;UBERON:0004765,1.58e-09,90;UBERON:0002405,3.08e-09,93;UBERON:0002390,8.62e-09,98;UBERON:0003061,8.62e-09,98;UBERON:0001434,1.27e-08,100;UBERON:0002193,5.11e-08,108 | |||
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|short_description=p@chr17:40351201..40351230,+ | |||
}} | }} |
Latest revision as of 16:57, 25 July 2015
Short description: | p@chr17:40351201..40351230, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:40351201..40351230, + |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 3.03e-98 | 3 |
CD14-low, CD16-positive monocyte | 3.03e-98 | 3 |
intermediate monocyte | 4.91e-91 | 9 |
CD14-positive, CD16-positive monocyte | 4.91e-91 | 9 |
classical monocyte | 4.46e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.46e-20 | 42 |
defensive cell | 1.22e-17 | 48 |
phagocyte | 1.22e-17 | 48 |
monopoietic cell | 3.22e-14 | 59 |
monocyte | 3.22e-14 | 59 |
monoblast | 3.22e-14 | 59 |
promonocyte | 3.22e-14 | 59 |
macrophage dendritic cell progenitor | 8.92e-14 | 61 |
myeloid lineage restricted progenitor cell | 8.75e-13 | 66 |
granulocyte monocyte progenitor cell | 1.33e-12 | 67 |
myeloid leukocyte | 9.00e-12 | 72 |
nongranular leukocyte | 1.15e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
leukocyte | 4.36e-09 | 136 |
myeloid cell | 5.11e-08 | 108 |
common myeloid progenitor | 5.11e-08 | 108 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.49e-11 | 76 |
bone element | 2.09e-10 | 82 |
skeletal element | 1.58e-09 | 90 |
immune system | 3.08e-09 | 93 |
hematopoietic system | 8.62e-09 | 98 |
blood island | 8.62e-09 | 98 |
skeletal system | 1.27e-08 | 100 |
hemolymphoid system | 5.11e-08 | 108 |