FFCP PHASE1:Hg19::chr17:56357193..56357204,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:56357193..56357204,- | |||
|description=CAGE_peak_at_chr17:56357193..56357204,- | |||
|id=chr17:56357193..56357204,- | |||
|ontology_enrichment_celltype=CL:0002057!4.02e-61!42;CL:0000860!1.46e-56!45;CL:0000766!2.28e-56!76;CL:0000763!4.86e-48!112;CL:0000049!4.86e-48!112;CL:0002194!1.28e-43!63;CL:0000576!1.28e-43!63;CL:0000040!1.28e-43!63;CL:0000559!1.28e-43!63;CL:0002009!4.57e-42!65;CL:0000839!1.45e-38!70;CL:0000557!6.37e-38!71;CL:0000037!6.90e-35!172;CL:0000566!6.90e-35!172;CL:0002032!4.71e-33!165;CL:0000837!4.71e-33!165;CL:0000988!2.06e-32!182;CL:0000738!5.01e-32!140;CL:0002087!1.14e-24!119;CL:0000094!1.93e-22!8;CL:0002031!9.16e-22!124;CL:0000081!4.91e-16!11;CL:0002393!1.32e-14!9;CL:0002397!1.32e-14!9;CL:0000875!1.26e-11!3;CL:0002396!1.26e-11!3;CL:0000134!1.99e-11!358;CL:0000767!2.60e-11!3;CL:0002320!5.20e-11!365;CL:0000219!1.51e-09!390;CL:0000771!3.24e-09!2;CL:0000034!7.00e-08!444;CL:0000048!8.34e-08!430;CL:0000723!1.47e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000771;7.67e-18;2!CL:0000576;1.68e-14;48!CL:0000860;3.79e-13;33!CL:0002057;3.79e-13;33!CL:0002393;1.03e-12;6!CL:0002397;1.03e-12;6!CL:0000766;1.42e-10;69!CL:0000094;4.84e-10;8!CL:0000037;3.53e-09;1!CL:0001024;3.53e-09;1!CL:0000763;1.41e-08;100!CL:0000473;1.69e-08;39!CL:0000234;1.69e-08;39!CL:0000081;2.00e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.87e-25,42;CL:0002057,2.87e-25,42;CL:0000763,2.32e-23,108;CL:0000049,2.32e-23,108;CL:0000766,3.94e-22,72;CL:0000473,7.40e-22,48;CL:0000234,7.40e-22,48;CL:0000771,7.07e-18,2;CL:0002194,4.46e-17,59;CL:0000576,4.46e-17,59;CL:0000040,4.46e-17,59;CL:0000559,4.46e-17,59;CL:0002009,1.85e-16,61;CL:0000037,1.30e-15,168;CL:0000839,4.45e-15,66;CL:0000557,7.95e-15,67;CL:0000988,1.21e-14,177;CL:0002032,1.27e-14,161;CL:0000837,1.27e-14,161;CL:0002393,2.60e-14,9;CL:0002397,2.60e-14,9;CL:0000738,1.58e-10,136;CL:0000094,4.85e-10,8;CL:0001024,2.55e-09,1;CL:0002087,7.71e-08,115;CL:0002031,1.97e-07,120;CL:0000081,2.00e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.29e-17;42!CL:0000049;9.78e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:225;3.53e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:225,2.35e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.81e-44!102;UBERON:0003061!2.81e-44!102;UBERON:0002193!1.57e-39!112;UBERON:0002371!1.77e-35!80;UBERON:0001474!1.72e-32!86;UBERON:0004765!1.46e-26!101;UBERON:0001434!1.46e-26!101;UBERON:0002405!8.04e-26!115;UBERON:0003081!3.87e-16!216;UBERON:0002204!3.84e-13!167;UBERON:0002384!1.92e-10!375;UBERON:0000178!4.00e-08!15;UBERON:0000179!4.00e-08!15;UBERON:0000463!4.00e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.11e-17,98;UBERON:0003061,1.11e-17,98;UBERON:0002193,8.54e-16,108;UBERON:0002371,3.29e-15,76;UBERON:0001474,6.05e-14,82;UBERON:0004765,1.62e-12,90;UBERON:0002405,4.80e-12,93;UBERON:0001434,4.73e-11,100;UBERON:0003081,4.29e-07,203 | |||
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| ||
|short_description=p@chr17:56357193..56357204,- | |||
}} | }} |
Latest revision as of 19:16, 25 July 2015
Short description: | p@chr17:56357193..56357204, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:56357193..56357204, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.87e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.87e-25 | 42 |
myeloid cell | 2.32e-23 | 108 |
common myeloid progenitor | 2.32e-23 | 108 |
myeloid leukocyte | 3.94e-22 | 72 |
defensive cell | 7.40e-22 | 48 |
phagocyte | 7.40e-22 | 48 |
eosinophil | 7.07e-18 | 2 |
monopoietic cell | 4.46e-17 | 59 |
monocyte | 4.46e-17 | 59 |
monoblast | 4.46e-17 | 59 |
promonocyte | 4.46e-17 | 59 |
macrophage dendritic cell progenitor | 1.85e-16 | 61 |
hematopoietic stem cell | 1.30e-15 | 168 |
myeloid lineage restricted progenitor cell | 4.45e-15 | 66 |
granulocyte monocyte progenitor cell | 7.95e-15 | 67 |
hematopoietic cell | 1.21e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.27e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-14 | 161 |
intermediate monocyte | 2.60e-14 | 9 |
CD14-positive, CD16-positive monocyte | 2.60e-14 | 9 |
leukocyte | 1.58e-10 | 136 |
granulocyte | 4.85e-10 | 8 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.55e-09 | 1 |
nongranular leukocyte | 7.71e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.97e-07 | 120 |
blood cell | 2.00e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.11e-17 | 98 |
blood island | 1.11e-17 | 98 |
hemolymphoid system | 8.54e-16 | 108 |
bone marrow | 3.29e-15 | 76 |
bone element | 6.05e-14 | 82 |
skeletal element | 1.62e-12 | 90 |
immune system | 4.80e-12 | 93 |
skeletal system | 4.73e-11 | 100 |
lateral plate mesoderm | 4.29e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
syndrome | 2.35e-09 | 1 |