FFCP PHASE1:Hg19::chr17:62144141..62144166,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:62144141..62144166,- to FFCP PHASE1:Hg19::chr17:62144141..62144166,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:62144141..62144166,- | |||
|coexpression_cluster_id=C343 | |||
|description=CAGE_peak_at_chr17:62144141..62144166,- | |||
|id=chr17:62144141..62144166,- | |||
|ontology_enrichment_celltype=CL:0000738!2.43e-22!140;CL:0000791!1.08e-19!18;CL:0000789!1.08e-19!18;CL:0002420!1.08e-19!18;CL:0002419!1.08e-19!18;CL:0000790!1.08e-19!18;CL:0000625!1.18e-16!11;CL:0002087!9.92e-16!119;CL:0002031!8.28e-15!124;CL:0000037!1.05e-14!172;CL:0000566!1.05e-14!172;CL:0002032!1.41e-13!165;CL:0000837!1.41e-13!165;CL:0000988!1.43e-13!182;CL:0000084!1.18e-12!25;CL:0000827!1.18e-12!25;CL:0000766!6.68e-12!76;CL:0002009!3.80e-09!65;CL:0000557!4.21e-09!71;CL:0002057!4.89e-09!42;CL:0000860!7.37e-09!45;CL:0002194!5.24e-08!63;CL:0000576!5.24e-08!63;CL:0000040!5.24e-08!63;CL:0000559!5.24e-08!63;CL:0000763!7.53e-08!112;CL:0000049!7.53e-08!112;CL:0000839!8.83e-08!70;CL:0000094!7.00e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.88e-42;18!CL:0000789;5.88e-42;18!CL:0002419;5.88e-42;18!CL:0000625;3.24e-34;11!CL:0000084;4.96e-29;25!CL:0000624;1.46e-12;6!CL:0000623;3.23e-11;3!CL:0000767;1.18e-10;3!CL:0000094;2.03e-10;8!CL:0000226;2.40e-10;3!CL:0000842;2.40e-10;3!CL:0000542;7.74e-09;53!CL:0000771;5.81e-08;2!CL:0000081;1.83e-07;11!CL:0002087;4.90e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.55e-42,18;CL:0000789,3.55e-42,18;CL:0002420,3.55e-42,18;CL:0002419,3.55e-42,18;CL:0000790,3.55e-42,18;CL:0000625,2.19e-34,11;CL:0000084,3.47e-29,25;CL:0000827,3.47e-29,25;CL:0000738,2.55e-22,136;CL:0002087,4.76e-18,115;CL:0000838,8.86e-18,52;CL:0000542,2.38e-17,53;CL:0000051,2.38e-17,53;CL:0000037,2.55e-16,168;CL:0000988,4.99e-15,177;CL:0002031,2.79e-14,120;CL:0002032,6.49e-14,161;CL:0000837,6.49e-14,161;CL:0000624,1.26e-12,6;CL:0000623,3.41e-11,3;CL:0000825,3.41e-11,3;CL:0000767,1.04e-10,3;CL:0000094,1.88e-10,8;CL:0000226,2.64e-10,3;CL:0000842,2.64e-10,3;CL:0000771,5.82e-08,2;CL:0000081,1.74e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;5.88e-42;18!CL:0000051;7.74e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.83e-16!102;UBERON:0003061!1.83e-16!102;UBERON:0002193!1.45e-15!112;UBERON:0007023!1.80e-14!115;UBERON:0000178!6.85e-13!15;UBERON:0000179!6.85e-13!15;UBERON:0000463!6.85e-13!15;UBERON:0002405!2.94e-07!115;UBERON:0002371!3.31e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.45e-24;15!UBERON:0000179;6.45e-24;15!UBERON:0000463;6.45e-24;15!UBERON:0002390;1.35e-13;32!UBERON:0002193;1.97e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.44e-24,15;UBERON:0000179,7.44e-24,15;UBERON:0000463,7.44e-24,15;UBERON:0002390,9.78e-12,98;UBERON:0003061,9.78e-12,98;UBERON:0002193,3.92e-10,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,16.1279353508051,8.82807615623589,1.54816123316076,0,0,0,0,0,0,1.66198622559563,1.40381113229099,1.95309783644267,0.671746422719773,2.26725566213286,1.54545340580512,0.290796477559129,0,0,0,0,0,0,1.2808035326455,0,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,1.36453075028923,0.224723484445085,0.612167784741805,0.641858054152187,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,1.0429658368404,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,1.96709770113833,1.17903228824749,1.43921049299656,0,0,0,0,60.2730571748789,1.76763544484902,1.99380505125259,1.62482318259009,7.94166182299186,15.8672404023051,3.61763390128087,2.76350017785848,1.15921234294021,0,0,0,5.09892042139048,10.7301738208538,5.84166657320471,5.81945291644857,2.86708872891687,2.60433381542567,1.90090408889675,4.51725357233318,5.24745105733115,4.99722906209383,7.34009481336452,8.21127996921047,13.3060450528323,8.02320587350522,5.06885413589796,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,11.6334079244498,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3683992957503,7.33133754522359,9.88241379354062,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,2.5885704098234,5.01619521676188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0.282431402330337,0,0,0,0,4.56702848308952,1.52927441428475,3.41788312304498,4.76463550915578,4.11362273086194,5.18778648954174,8.10047155857172,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,2.12298154808014,0.611030144933625,0.296521128680622,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,0,0,0,0,0,1.49502377594773,0.314408610199332,2.07119527673598,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.135939465953663,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0.357382720883282,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85217979459067,0,0,0.245148321753905,0,0,0,0,0,1.78569444161722,1.22469987149797,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.852935927603924,0.476128862927481,0,0.744896571550295,0,0,0,0.217716747896961,0,0.740872583160463,0.358611026963382,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,16.1279353508051,8.82807615623589,1.54816123316076,0,0,0,0,0,0,1.66198622559563,1.40381113229099,1.95309783644267,0.671746422719773,2.26725566213286,1.54545340580512,0.290796477559129,0,0,0,0,0,0,1.2808035326455,0,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,1.36453075028923,0.224723484445085,0.612167784741805,0.641858054152187,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,1.0429658368404,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,1.96709770113833,1.17903228824749,1.43921049299656,0,0,0,0,60.2730571748789,1.76763544484902,1.99380505125259,1.62482318259009,7.94166182299186,15.8672404023051,3.61763390128087,2.76350017785848,1.15921234294021,0,0,0,5.09892042139048,10.7301738208538,5.84166657320471,5.81945291644857,2.86708872891687,2.60433381542567,1.90090408889675,4.51725357233318,5.24745105733115,4.99722906209383,7.34009481336452,8.21127996921047,13.3060450528323,8.02320587350522,5.06885413589796,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,11.6334079244498,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3683992957503,7.33133754522359,9.88241379354062,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,2.5885704098234,5.01619521676188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0.282431402330337,0,0,0,0,4.56702848308952,1.52927441428475,3.41788312304498,4.76463550915578,4.11362273086194,5.18778648954174,8.10047155857172,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,2.12298154808014,0.611030144933625,0.296521128680622,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,0,0,0,0,0,1.49502377594773,0.314408610199332,2.07119527673598,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.135939465953663,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0.357382720883282,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85217979459067,0,0,0.245148321753905,0,0,0,0,0,1.78569444161722,1.22469987149797,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.852935927603924,0.476128862927481,0,0.744896571550295,0,0,0,0.217716747896961,0,0.740872583160463,0.358611026963382,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,1.00636896795513,0 | ||
|short_description=p@chr17:62144141..62144166,- | |||
}} | }} |
Latest revision as of 19:50, 25 July 2015
Short description: | p@chr17:62144141..62144166, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:62144141..62144166, - |
Coexpression cluster: | C343_CD4_mycosis_kidney_signet_hairy_b_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.55e-42 | 18 |
alpha-beta T cell | 3.55e-42 | 18 |
immature T cell | 3.55e-42 | 18 |
mature T cell | 3.55e-42 | 18 |
immature alpha-beta T cell | 3.55e-42 | 18 |
CD8-positive, alpha-beta T cell | 2.19e-34 | 11 |
T cell | 3.47e-29 | 25 |
pro-T cell | 3.47e-29 | 25 |
leukocyte | 2.55e-22 | 136 |
nongranular leukocyte | 4.76e-18 | 115 |
lymphoid lineage restricted progenitor cell | 8.86e-18 | 52 |
lymphocyte | 2.38e-17 | 53 |
common lymphoid progenitor | 2.38e-17 | 53 |
hematopoietic stem cell | 2.55e-16 | 168 |
hematopoietic cell | 4.99e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 2.79e-14 | 120 |
hematopoietic oligopotent progenitor cell | 6.49e-14 | 161 |
hematopoietic multipotent progenitor cell | 6.49e-14 | 161 |
CD4-positive, alpha-beta T cell | 1.26e-12 | 6 |
natural killer cell | 3.41e-11 | 3 |
pro-NK cell | 3.41e-11 | 3 |
basophil | 1.04e-10 | 3 |
granulocyte | 1.88e-10 | 8 |
single nucleate cell | 2.64e-10 | 3 |
mononuclear cell | 2.64e-10 | 3 |
eosinophil | 5.82e-08 | 2 |
blood cell | 1.74e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 7.44e-24 | 15 |
haemolymphatic fluid | 7.44e-24 | 15 |
organism substance | 7.44e-24 | 15 |
hematopoietic system | 9.78e-12 | 98 |
blood island | 9.78e-12 | 98 |
hemolymphoid system | 3.92e-10 | 108 |